Pertussis: infection, vaccination and gene polymorphisms

Pertussis or whooping cough is a human respiratory tract infection and a vaccine-preventable disease that is caused by Bordetella pertussis bacteria. Pertussis vaccination has been part of the Finnish national vaccine program since 1952. Despite extensive vaccinations, the incidence of pertussis has increased in many countries during the last decades. Large epidemics have been observed also in countries with high vaccine coverage. Inter-individual variation in immune responses is always encountered after vaccination. Low vaccine responses may cause vulnerability to pertussis even straight after vaccination. Reasons for low responses are not fully understood. The innate immune system is responsible for the initial recognition of pathogens and vaccine antigens. The role of innate immunity on pertussis immunity has not been thoroughly investigated. Mannose-binding lectin (MBL) and toll-like receptor 4 (TLR4) are important molecules of the innate immune system and in the recognition of pathogens. Cytokines form a signaling network that have a notable role in immune responses after infections as well as after vaccinations. Single nucleotide polymorphism (SNP) is common in genes encoding these molecules and the polymorphisms have been reported to affect vaccine response after viral and bacterial vaccines. This study investigated the gene polymorphisms of MBL2, TLR4 and interleukin (IL)-10 promoter and their association with vaccine responses after acellular pertussis (aP) vaccination in Finnish adolescents and infants. Cell-mediated immune responses were investigated ten years after the previous pertussis vaccinations in young adults. In addition, the role of MBL deficiency in pertussis infection susceptibility was evaluated. The results of this study show that subjects with TLR4 polymorphism had lower antibody production and persistence after aP vaccination compared with normal allele. A specific SNP in the TLR4 gene was associated with decreased antibody responses and persistence in adolescents after aP booster vaccination. Cell-mediated immune responses were partly detected ten years after the previous vaccination; booster vaccine clearly enhanced the responses. In addition, subjects with IL-10 polymorphism had altered cell-mediated immune responses. MBL deficiency was found to be more frequent in pertussis patients than healthy controls but the polymorphism of MBL2 was not associated with antibody responses after acellular pertussis vaccination. The novel finding of this study was that genetic variation in the innate immune system seems to play a role in altered pertussis vaccine responses as well as in pertussis infection. These new findings enlighten the mechanisms behind the low responses after pertussis vaccination and help to predict risk factors related to this phenomenon.

Hävittäjälentäjän fyysinen kuormittuminen ja lentämistä tukevan toiminnallisen harjoittelun perusteet

Hävittäjälentäjät ovat yksi Suomen ilmavoimien suorituskyvyn kriittisimmistä osista. Lentotehtäviä suorittaessaan lentäjään kohdistuu suuria kiihtyvyyksiä. G-voimat kuormittavat erityisesti tuki- ja liikuntaelimistöä aiheuttaen vakaviakin vammoja, kuten välilevyjen pullistumia ja repeämiä. Laadukkaalla fyysisellä harjoittelulla on useissa tutkimuksissa huomattu olevan vammoja ennalta ehkäisevä sekä suorituskykyä kehittävä vaikutus. Toiminnallinen harjoittelu on viime vuosina noussut suosituksi harjoittelumuodoksi, jopa huippu-urheilijoiden keskuudessa. Tämän tutkimuksen tarkoituksena on kartoittaa hävittäjälentäjän fyysistä kuormittumista, kuormittumisen hallintaa fyysisen harjoittelun avulla sekä toiminnallisen harjoittelun perusteita. Edellä mainitun perusteella on arvioitu, mitä mahdollisuuksia toiminnallinen harjoittelu toisi hävittäjälentäjien fyysiseen harjoitteluun. Tutkielma on perinteinen kirjallisuuskatsaus. Aineisto koostuu pääasiassa koti- ja ulkomaisista ilmailufysiologiaa, hävittäjälentäjän kuormittumista sekä toiminnallista harjoittelua käsittelevistä tutkimuksista, oppikirjoista, artikkeleista ja internet-lähteistä. Havaintoja on tarkasteltu tutkimuksen moniulotteisessa viitekehyksessä, joka muodostuu ilmailufysiologisista, liikuntalääketieteellisistä sekä sotilaspedagogisista näkökulmista. Keskeistä hävittäjälentäjälle on hyvä G-sietokyky. Tutkimuksissa on huomattu, että voimaharjoittelulla G-sietokykyä voidaan nostaa merkittävästi. Hyvä voimataso ja reagointinopeus yhdistettynä oikeaoppiseen tekniikkaan ovat avainasemassa tehokkaan vastaponnistuksen muodostamiselle. Toiminnallinen eli funktionaalinen harjoittelu mahdollistaa edullisen, monipuolisen ja paikkaan sitomattoman tavan harjoitella tehokkaasti. Tutkimukset osoittavat toiminnallisen harjoittelun kehittävän voimaa, kestävyyttä, kehonhallintaa ja ketteryyttä. Harjoittelussa hyödynnetään kehonpainoa sekä erilaisia harjoitusvälineitä. Oikein valituilla toiminnallisilla liikkeillä harjoitusvaikutus saadaan kohdennettua haluttuihin lihasryhmiin, ku-ten hävittäjälentäjille tärkeisiin niskan tai keskivartalon alueen lihaksiin. Toiminnallinen harjoittelu mahdollistaa myös ennaltaehkäiseviä ja huoltavia harjoitusmahdollisuuksia hävittäjälentäjille. Toiminnallinen harjoittelu ja sen eri muodot, kuten CrossFit voivat antaa syvyyttä ja monipuolisuutta hävittäjälentäjälle tuottamalla erilaisia harjoitusärsykkeitä. Lisäksi vaihtelu voi lisätä harjoitusmotivaatiota. Toiminnallisen harjoittelun ei kuitenkaan ole tarkoitus syrjäyttää kokonaan perinteistä voimaharjoittelua. Todennäköisesti parhaat tulokset saadaan yhdistämällä molempia harjoitusmuotoja. Toiminnallisen harjoittelun soveltuvuutta hävittäjälentäjille olisi kuitenkin tärkeää tutkia tarkemmin optimaalisten tulosten takaamiseksi.

Diel patterns and tissue-specificity of environmental responses in fish

Humans are profoundly changing aquatic environments through climate change and the release of nutrients and chemicals. To understand the effects of these changes on natural populations, knowledge on individuals’ environmental responses is needed. At the molecular level, the environmental responses are partly mediated by chances in messenger RNA and protein levels. In this thesis I study messenger RNA and protein responses to an assortment of environmental stressors in fish. As daily (diel) rhythms are known to be ubiquitous in different tissues, I particularly focus on diel patterns in the responses. The studied species are the three-spined stickleback (Gasterosteus aculeatus L.) and the Arctic char (Salvelinus alpinus L.), both of which have circumpolar distribution in the Northern hemisphere. In the first two studies, three-spined sticklebacks were exposed to both the non-steroidal anti-inflammatory drug diclofenac and low-oxygen conditions (hypoxia), and their responses measured at separate time points in the liver and gills. The results show how the seemingly unrelated environmental stressors, hypoxia and anti-inflammatory drugs, can have harmful combined effects that differ from the effects of each stressor alone. Moreover, both stressors disturbed natural diel patterns in gene expression. In the third study, I studied the responses of three-spined sticklebacks to two test chemicals: one used in hormonal medicine (17α-ethinyl-oestradiol) and one used as a plasticizer and solvent chemical (di-n-butyl phthalate). The results suggest that the phthalate can affect genes related to spermatogenesis in fish testes, while estrogen-mimicking compounds can lead to numerous disturbances in the endocrine system. In the final study, the temperature-dependence of diel rhythms in messenger RNA levels were evaluated in the liver tissue of the Arctic char, a cold-adapted salmonid. The results show that cold acclimation repressed diel rhythms in gene expression compared to warm-acclimated fish, in which the expression of hundreds of genes was rhythmic, suggesting the circadian clock of the Arctic fish species can be sensitive to temperature. Overall, the results of the thesis indicate that fishes’ responses to abiotic factors interact with their diel rhythms, and more studies on the consequences of these interactions are needed to comprehensively understand human impacts on ecosystems.

Monitoring Directed Energy Deposition Processes in Additive Manufacturing

The purpose of this study is to find out how laser based Directed Energy Deposition processes can benefit from different types of monitoring. DED is a type of additive manufacturing process, where parts are manufactured in layers by using metallic powder or metallic wire. DED processes can be used to manufacture parts that are not possible to manufacture with conventional manufacturing processes, when adding new geometries to existing parts or when wanting to minimize the scrap material that would result from machining the part. The aim of this study is to find out why laser based DED-processes are monitored, how they are monitored and what devices are used for monitoring. This study has been done in the form of a literature review. During the manufacturing process, the DED-process is highly sensitive to different disturbances such as fluctuations in laser absorption, powder feed rate, temperature, humidity or the reflectivity of the melt pool. These fluctuations can cause fluctuations in the size of the melt pool or its temperature. The variations in the size of the melt pool have an effect on the thickness of individual layers, which have a direct impact on the final surface quality and dimensional accuracy of the parts. By collecting data from these fluctuations and adjusting the laser power in real-time, the size of the melt pool and its temperature can be kept within a specified range that leads to significant improvements in the manufacturing quality. The main areas of monitoring can be divided into the monitoring of the powder feed rate, the temperature of the melt pool, the height of the melt pool and the geometry of the melt pool. Monitoring the powder feed rate is important when depositing different material compositions. Monitoring the temperature of the melt pool can give information about the microstructure and mechanical properties of the part. Monitoring the height and the geometry of the melt pool is an important factor in achieving the desired dimensional accuracy of the part. By combining multiple different monitoring devices, the amount of fluctuations that can be controlled will be increased. In addition, by combining additive manufacturing with machining, the benefits of both processes could be utilized.

Kerääjäkasvien viljely Uudellamaalla vuonna 2015

Kerääjäkasvi käyttää yksivuotisen varsinaisen viljelykasvin jälkeen maahan jääviä tai vapautuvia ravinteita ja suojaa maata eroosiolta sadonkorjuun jälkeen. Tätä uuden ympäristösitoumuksen toimenpidettä toteutti vuonna 2015 lähes neljäsosa Uudenmaan viljelijöistä. Kerääjäkasveja viljeltiin 14 %:lla koko alueen peltoalasta. Periaatteessa melkein koko viljapinta-alalla voisi viljellä kerääjäkasveja. Tämä tarkoittaisi 60 % Uudenmaan peltoalasta. Kerääjäkasvien viljelijöille lähetettiin tammi-helmikuussa 2016 webropol-kysely. Kyselyyn vastasi 152 viljelijää. Vastausprosentti oli 32% kyselyn saaneista ja se kattoi 20 % Uudenmaan kaikista kerääjäkasvin viljelijöistä.80 % vastaajista viljeli kerääjäkasveja ensimmäistä vuotta. Keskimäärin viljelijöillä oli 25 hehtaaria kerääjäkasviviljelyssä, vaihtelu tilojen välillä oli kuitenkin suurta. Kerääjäkasvien viljely on suosittua erityisesti suurilla tiloilla ja keskimääräistä nuorempien viljelijöiden keskuudessa. Korvaus (100 €/ha) on suurin syy kerääjäkasvien viljelyyn, mutta myös myönteiset ympäristövaikutukset ovat tärkeitä. Italianraiheinä ja valkoapila ovat suosituimmat kerääjäkasvit. Siemeniä käytetään niukanlaisesti suosituksiin verrattuna. Lähes puolet vastaajista on tehnyt investointeja kerääjäkasvin kylvön mahdollistamiseksi. Sadonkorjuu ja kasvinsuojelu sujuu useimmilta ilman suurempia ongelmia. Viljelijöistä enemmistö aikoo jatkaa kerääjäkasvien viljelyä, mikäli ehdot tai ainakin tukisumma säilyvät ennallaan. Neuvontaa ja lisätietoa kerääjäkasvin viljelyyn ilmoitti haluavansa kaksi viidestä vastaajasta. Vesienhoidon näkökulmasta olisi hyvä säilyttää kerääjäkasvusto talven yli ja sijoittaa lohkot vesistöjen läheisyyteen. Kyselyn tulosten ja toiveiden pohjalta pyritään tarjoamaan viljelijöille tietoa ja neuvontaa kerääjäkasvien viljelyyn jatkossa.

Grass-endophyte coevolution and ploidy levels in fescues

ABSTRACT Fescues consist of wild and cultivated grasses that have adapted to a wide range of environmental conditions. They are an excellent model species for evolutionary ecology studies that investigate symbiosis and polyploidization and their effects on plant performance. First, they are frequently infected with symbiotic endophytic fungi known to affect a plant’s ability to cope with biotic and abiotic environmental factors. Second, fescue species have been reported to have substantial intraspecific variation in their ploidy level and morphology. In my thesis, I examined large-scale generalizations for frequency of polyploidy and endophyte infections and their effects on plant morphology. As a model species, I selected red (Festuca rubra) and viviparous sheep’s (F. vivipara) fescues. They are closely related, but they differ in terms of distribution and endophyte infection frequency. I investigated the biogeographic pattern and population biology of 29 red and 12 viviparous sheep’s fescue populations across ≈300 latitudes in Europe (400-690 N). To examine plant ploidy levels, I implemented time- and cost-efficient plate-based high throughput flow cytometric analysis. This efficient procedure enabled me to analyze over 1000 red fescue individuals. I found three ploidy levels among them: overall 84 %, 9 % and 7 % of the red fescue plants were hexaploid, tetraploid and octoploid, respectively. However, all viviparous sheep’s fescue plants were tetraploid. Ploidy level of red fescue appeared to some extent follow gradients in latitude and primary production as suggested by previous studies, but these results could be explained better by taking the sampling design and local adaptation into account. Three Spanish populations were mostly tetraploids and one high elevation population in northernmost Finland (Halti) was octoploid, while most other populations (25 sites) were dominated by hexaploids. Endophyte infection frequencies of wild fescue populations varied from 0 to 81 % in red fescue populations and from 0 to 30 % in viviparous sheep’s fescue populations. No gradients with latitude or primary production of the sites were detected. As taxonomy of red fescues is somewhat unclear, I also studied morphology, ploidy variation and endophyte status of proposed subspecies of European red fescues. Contrary to previous literature, different ploidy levels occurred in the same subspecies. In addition to wild fescues, I also used two agronomically important cultivars of meadow and tall fescue (Schedonorus phoenix and S. pratensis). As grass-legume mixtures have an agronomic advantage over monocultures in meadows, I carried out a mixture/competition experiment with fescues and red clover to find that species composition, nutrient availability and endophyte status together determined the total biomass yield that was higher in mixtures compared to monocultures. The results of this thesis demonstrate the importance of local biotic and abiotic factors such as grazing gradients and habitat types, rather than suggested general global geographical or environmental factors on grass polyploidization or its association with symbiotic endophytic fungi. I conclude that variation in endophyte infection frequencies and ploidy levels of wild fescues support the geographic mosaic theory of coevolution. Historical incidents, e.g., glaciation and present local factors, rather than ploidy or endophyte status, determine fescue morphology.

Promoting Healthy Lifestyles with Personalized, APOE Genotype Based Health Information: The Effects on Psychological-, Health Behavioral and Clinical Factors

There is an increasing demand for individualized, genotype-based health advice. The general population-based dietary recommendations do not always motivate people to change their life-style, and partly following this, cardiovascular diseases (CVD) are a major cause of death in worldwide. Using genotype-based nutrition and health information (e.g. nutrigenetics) in health education is a relatively new approach, although genetic variation is known to cause individual differences in response to dietary factors. Response to changes in dietary fat quality varies, for example, among different APOE genotypes. Research in this field is challenging, because several non-modifiable (genetic, age, sex) and modifiable (e.g. lifestyle, dietary, physical activity) factors together and with interaction affect the risk of life-style related diseases (e.g. CVD). The other challenge is the psychological factors (e.g. anxiety, threat, stress, motivation, attitude), which also have an effect on health behavior. The genotype-based information is always a very sensitive topic, because it can also cause some negative consequences and feelings (e.g. depression, increased anxiety). The aim of this series of studies was firstly to study how individual, genotype-based health information affects an individual’s health form three aspects, and secondly whether this could be one method in the future to prevent lifestyle-related diseases, such as CVD. The first study concentrated on the psychological effects; the focus of the second study was on health behavior effects, and the third study concentrated on clinical effects. In the fourth study of this series, the focus was on all these three aspects and their associations with each other. The genetic risk and health information was the APOE gene and its effects on CVD. To study the effect of APOE genotype-based health information in prevention of CVD, a total of 151 volunteers attended the baseline assessments (T0), of which 122 healthy adults (aged 20 – 67 y) passed the inclusion criteria and started the one-year intervention. The participants (n = 122) were randomized into a control group (n = 61) and an intervention group (n = 61). There were 21 participants in the intervention Ɛ4+ group (including APOE genotypes 3/4 and 4/4) and 40 participants in the intervention Ɛ4- group (including APOE genotypes 2/3 and 3/3). The control group included 61 participants (including APOE genotypes 3/4, 4/4, 2/3, 3/3 and 2/2). The baseline (T0) and follow-up assessments (T1, T2, T3) included detailed measurements of psychological (threat and anxiety experience, stage of change), and behavioral (dietary fat quality, consumption of vegetables, - high fat/sugar foods and –alcohol, physical activity and health and taste attitudes) and clinical factors (total-, LDL- HDL cholesterol, triglycerides, blood pressure, blood glucose (0h and 2h), body mass index, waist circumference and body fat percentage). During the intervention six different communication sessions (lectures on healthy lifestyle and nutrigenomics, health messages by mail, and personal discussion with the doctor) were arranged. The intervention groups (Ɛ4+ and Ɛ4-) received their APOE genotype information and health message at the beginning of the intervention. The control group received their APOE genotype information after the intervention. For the analyses in this dissertation, the results for 106/107 participants were analyzed. In the intervention, there were 16 participants in the high-risk (Ɛ4+) group and 35 in the low-risk (Ɛ4-) group. The control group had 55 participants in studies III-IV and 56 participants in studies I-II. The intervention had both short-term (≤ 6 months) and long-term (12 months) effects on health behavior and clinical factors. The short-term effects were found in dietary fat quality and waist circumference. Dietary fat quality improved more in the Ɛ4+ group than the Ɛ4- and the control groups as the personal, genotype-based health information and waist circumference lowered more in the Ɛ4+ group compared with the control group. Both these changes differed significantly between the Ɛ4+ and control groups (p<0.05). A long-term effect was found in triglyceride values (p<0.05), which lowered more in Ɛ4+ compared with the control group during the intervention. Short-term effects were also found in the threat experience, which increased mostly in the Ɛ4+ group after the genetic feedback (p<0.05), but it decreased after 12 months, although remaining at a higher level compared to the baseline (T0). In addition, Study IV found that changes in the psychological factors (anxiety and threat experience, motivation), health and taste attitudes, and health behaviors (dietary, alcohol consumption, and physical activity) did not directly explain the changes in triglyceride values and waist circumference. However, change caused by a threat experience may have affected the change in triglycerides through total- and HDL cholesterol. In conclusion, this dissertation study has given some indications that individual, genotypebased health information could be one potential option in the future to prevent lifestyle-related diseases in public health care. The results of this study imply that personal genetic information, based on APOE, may have positive effects on dietary fat quality and some cardiovascular risk markers (e.g., improvement in triglyceride values and waist circumference). This study also suggests that psychological factors (e.g. anxiety and threat experience) may not be an obstacle for healthy people to use genotype-based health information to promote healthy lifestyles. However, even in the case of very personal health information, in order to achieve a permanent health behavior change, it is important to include attitudes and other psychological factors (e.g. motivation), as well as intensive repetition and a longer intervention duration. This research will serve as a basis for future studies and its information can be used to develop targeted interventions, including health information based on genotyping that would aim at preventing lifestyle diseases. People’s interest in personalized health advices has increased, while also the costs of genetic screening have decreased. Therefore, generally speaking, it can be assumed that genetic screening as a part of the prevention of lifestyle-related diseases may become more common in the future. In consequence, more research is required about how to make genetic screening a practical tool in public health care, and how to efficiently achieve long-term changes.

Valtatie 21 Kolari - Kilpisjärvi : Toimenpideselvitys

Tehtävänä oli laatia toimenpideselvitys valtatielle 21 välille Kolari - Kilpisjärvi. Noin 280 kilometrin mittainen tarkastelujakso sijoittuu Suomi-neidon käsivarteen Kolarin, Muonion ja Enontekiön kuntien alueelle. Valtatie 21 osana kansainvälistä E8 -tietä on Pohjois-Kalotin ja Länsi-Lapin merkittävin pohjois-etelä -suuntainen pääväylä, jolla on suuri merkitys alueen väestölle, elinkeinoelämälle ja matkailulle. Tie palvelee nykyään erityisesti kalottialueen kuljetuksia Tromssan ja Finnmarkin talousalueille sekä Norjan kalateollisuuden kuljetuksia, jotka ovat voimakkaasti kasvavassa roolissa tien käyttäjinä. Tarkasteluvälille on ominaista valtatien kapeus ja laatutason voimakas vaihtelu. Nykyinen tie ei vastaa leveydeltään, geometrialtaan tai kunnoltaan valtatielle asetettuja minimivaatimuksia. Ajo-olosuhteet ovat erityistä tarkkaavaisuutta vaativat, talviaikaan jopa erittäin vaativat. Keskimääräinen vuorokausiliikennemäärä vaihtelee tarkasteluvälillä 350 - 1500 ajon./vrk, josta raskaan liikenteen osuus on 13 - 20 %. Liikenteen kausivaihtelu on erittäin suurta. Viikkokausivaihtelukäyrissä erottuvat selvästi hiihto-, pääsiäis- ja kesälomat sekä ruska-aika. Vuosina 2005- 2014 tarkastelujaksolla tapahtui yhteensä 121 poliisin tietoon tullutta onnettomuutta, joista 60 % johti henkilövahinkoihin. Tarkastelujakson henkilövahinko-onnettomuusaste on varsin korkea ja ylittää valtakunnallisen ja Lapin valtateiden keskiarvon selvästi. Rekkojen tieltä suistumisia tapahtuu talvikaudella paljon. Porokolarit ovat yleisiä. Tarkasteluosuudella valtatie 21 sijoittuu kolmelle metsäkasvillisuusvyöhykkeelle, joten luonnonympäristön ominaisuudet muuttuvat voimakkaasti etelä-pohjois-suunnassa. Käsivarren alueen ilmasto ja kallioperä poikkeaa muusta Pohjois-Lapista. Valtatien ympäristössä on pohjoiselle Lapille tyypillisesti aapasoita ja niiden paikallisia muunnoksia palsasoita, joiden jääsydän säilyy sulamatta yli kesän. Suunnittelualueella on runsaasti luontoarvoja ja laajaalaisia luonnonsuojelualueita. Laajimmat suojelualueet koostuvat erämaa-alueista ja luonnonpuistoista. Alueella on myös paljon soidensuojelualueita. Selvitysalueen koko vesistöalue on Natura 2000 -aluetta lukuun ottamatta kolmen laskujoen vesistöaluetta. Tunturi-Lapin alueella on runsaasti pohjavesialueita, joita valtatie 21 risteää useassa kohtaa. Valtatien tuntumassa on useita sekä valtakunnallisesti arvokkaita että maakunnallisesti arvokkaita maiseman ja kulttuuriperinnön kohteita. Suuri osa näistä kohteista on pieniä pistemäisiä kohteita. Valtatien 21 kehittämiselle asetettiin tavoitetila vuodelle 2045. Tällöin valtatie on kotimaisen ja kansainvälisen liikenteen pääkulkuväylä seudulla ja osa korkealuokkaista Eurooppatie-verkostoa. Liikenne on sujuvaa ja liikkuminen on turvallista kaikilla liikkumismuodoilla ja kaikkina vuodenaikoina. Tien leveys, geometria ja rakenne on kunnostettu ja kohtaamistilanteet ovat turvallisia. Matka-ajat ovat kohtuulliset ja hyvin ennakoitavissa. Olosuhteista ja häiriötilanteista tiedotetaan reaaliajassa. Taajamissa liikkuminen on turvallista kaikilla kulkumuodoilla. Valtatie 21 tunnetaan nykyistä paremmin Revontultentienä, joka tarjoaa laadukkaan matkailutie-elämyksen palveluineen matkailijoille. Valtatie 21 esitetään Kolarin ja Kilpisjärven välillä parannettavaksi suurelta osin nykyisellä paikallaan. Tie ja sillat levennetään ja tien rakennetta vahvistetaan tai rakenne uusitaan käytännössä lähes koko matkalla aiemmin rakennettuja taajamakohtia lukuun ottamatta. Kokonaan uutta tietä tehdään Muotkatakka-Kilpisjärvi -välillä nykyisen tien viereen rakentaen. Kinostumista ehkäistään loiventamalla luiskia, jolloin ei muodostu kinostavaa taitetta. Ongelmaiset palsasuokohteet rakennetaan niin, etteivät routavauriot uusiudu. Taajamissa toimenpiteinä ovat turvallisten tien ylityspaikkojen rakentaminen huolella valittuihin kohteisiin ja systemaattinen ajonopeuksien hillintä. Taukopaikkoja rakennetaan lisää ja nykyisiä kunnostetaan. Tieympäristö kohennetaan raivaamalla umpeen kasvaneita kohtia tien varressa ja avaamalla tiellä kulkijalle jokinäkymiä. Taukopaikkojen ympäristöt raivataan ja siistitään. Poronhoidon ja liikenteen ristiriitoja vähennetään mm. ottamalla käyttöön digitaalinen porovaroitusjärjestelmä.

‘Théorie’, ‘hypothèse’, ‘modèle’ et ‘méthode’ dans le domaine de la linguistique: perspectives sémasiologique et onomasiologique

'Theory', 'hypothesis', 'model' and 'method' in linguistics: Semasiological and onomasiological perspectives The subject of this thesis is the use of generic scientific terms, in particular the four terms 'theory', 'hypothesis', 'model' and 'method', in linguistic research articles written in French and in Finnish. The thesis examines the types of scientific constructs to which these terms are applied, and seeks to explain the variation in the use of each term. A second objective of the thesis is to analyze the relationships among these terms, and the factors determining the choices made by writers. With its focus on the authentic use of generic scientific terms, the thesis complements the normative and theoretical descriptions of these terms in Science Studies and offers new information on actual writing practices. This thesis adheres to functional and usage-based linguistics, drawing its theoretical background from cognitive linguistics and from functional approaches to terminology. The research material consisted of 120 research articles (856 569 words), representing different domains of linguistics and written in French or Finnish (60 articles in each language). The articles were extracted from peer-reviewed scientific journals and were published between 2000 and 2010. The use of generic scientific terms in the material has been examined from semasiological and onomasiological perspectives. In the first stage, different usages related to each of the four central terms were analyzed. In the second stage, the analysis was extended to other terms and expressions, such as 'theoretical framework', 'approach' and ‘claim’, which were used to name scientific constructs similar to the four terms analyzed in the first stage. Finally, in order to account for the writer’s choice among the terms, a mixed methods approach was adopted, based on the results of a previously conducted questionnaire concerning the differences between these terms as experienced by linguists themselves. Despite the general ideal that scientific terms should be carefully defined, the study shows that the use of these central terms is not without ambiguity. What is understood by these terms may vary according to different conceptual and stylistic factors as well as epistemic and disciplinary traditions. In addition to their polysemy, the semantic potentials of these terms are in part overlapping. In most cases, the variation in the use of these terms is not likely to cause serious misunderstanding. Rather, it allows the researcher to express a specific conceptualization of the scientific constructs mentioned in the article. The discipline of linguistics, however, would benefit from a more elaborate metatheoretical discussion.

Suhteelliseen ilmaantuvuuteen perustuvan kovarianssirakenteen bayesiläinen MCMC-estimointi valikoituneessa perheaineistossa

Tässä tutkielmassa rintasyövän ja ruoansulatuselinten syöpien perheittäistä kertymistä ja perimäosuutta estimoitiin lapsena tai nuorena syövän sairastaneiden suomalaisten perheaineistoissa. Perheet poimittiin siten, että jokaisessa perheessä on vähintään yksi alle 40-vuotiaana diagnosoitu syöpätapaus vuosina 1970-2012. Rintasyöpäaineisto koostui 4921 perheestä, joissa oli kaikkiaan 26 259 henkilöä. Ruoansulatuselinten aineisto puolestaan koostui 3328 perheestä ja 22 441 henkilöstä. Syövän perimäosuuden suhteellista ilmaantuvuutta mallinnettiin hierarkkisella bayesiläisellä Poisson-regressio sekamallilla, jossa sairastumisalttiuden vaihtelu jaettiin ympäristön, perimän ja ylihajonnan komponentteihin. Parametrien yhteisposteriorijakaumaa arvioitiin MCMC-otannan avulla JAGS-ohjelmalla. Lisäksi syöpien kertymistä tarkasteltiin estimoimalla sukulaisuussuhteiden mukaan ositettuja suhteellisia syöpäilmaantuvuuksia. Simulaatiotutkimuksella arvioitiin tilastollisen mallin satunnaiskomponenttien estimoituminen ja tarkasteltiin harhan korjauksen vaikutusta tutkimusasetelmaan. Rintasyöpäaineistossa nuorten syöpäpotilaiden perheenjäsenillä havaittiin 739 syöpää ja perheenjäsenten keskimääräinen syöpäriski oli 81% (95%:n todennäköisyysväli 68-94%) suurempi kuin vastaavalla väestöllä. Rintasyövän perimäosuus oli 26% (0-57%). Ruoansulatuselinten syöpiä havaittiin perheenjäsenillä 574 ja perheenjäsenten syöpäriski oli 60% (48-73%) suurempi kuin väestöllä ja sen perimäosuudeksi estimoitiin 63% (37-88%). Tutkielman tulosten mukaan ympäristötekijöiden merkitys rintasyöpäaineistossa on suuri. Vastaavasti ruoansulatuselinten syövissä ympäristötekijöiden merkitys on pienempi ja perimän osuus selvästi suurempi.

Implementing The KiVa Antibullying Program: What Does It Take?

There is variation in how teachers and schools implement bullying prevention programs. Although this variation has been discussed, there has been little empirical research concerning the relationship between implementation fidelity and program outcomes. This thesis contains three studies, each of them in the context of implementing the KiVa antibullying program, and examines teachers’ actions in preventing and intervening in school bullying. The first aim of this thesis is to examine implementation degree of the KiVa curriculum and its’ association with reductions in victimization and bullying perpetration (Study I). The second aim is to clarify why teachers displayed different degrees of adherence to the KiVa curriculum during a school year (Study II). Thirdly, it is investigated whether recognizing victimization can be difficult for school staff (Study III). In addition to these peer-reviewed studies, the thesis includes a qualitative analysis (unpublished) of the teachers’ open answers concerning their implementation experiences. The data were collected from elementary school teachers (Studies I–II; the unpublished study), elementary school students (Study I), and students on the elementary and middle school levels (Study III) during the evaluation of the effectiveness of KiVa antibullying program between 2007 and 2009. The findings demonstrate that a larger reduction in victimization can be achieved in classrooms where teachers display higher levels of adherence to the KiVa curriculum and invest more time for preparing the lessons. Bullying perpetration, however, was not equally affected by the level of curriculum implementation. With respect to the implementation process over one year, there was significant variation between individual teachers’ activity—ranging from systematic and high implementation to declining delivery from lesson to lesson. The sustained actions (high and moderate levels of implementation) were premised on principal support for antibullying work. Lesson preparation was associated with keeping implementation high throughout the school year. The findings also implied that the belief in the effectiveness of the program is important for a higher implementation degree at starting point of the process. Finally, there are severe flaws in teachers’ ability to identify students who are victimized. As it turns out, it is possible that only one-fourth of chronically victimized students are helped by the school staff. Especially when the victims are middle-school-aged girls, when they bully others themselves, or when they do not tell adults about bullying, reaching out for them is difficult. Implementation and dissemination of research-based interventions will take a good deal of time and effort. The findings demonstrate that active implementation is important for improving program outcomes. They also show how implementation can be sustained—there are both individual and interpersonal factors that facilitate or inhibit high-quality implementation. Thus, implications for future research regarding the implementation of school-based programs are suggested.