Genetics of berry colour and anthocyanin content variation in grapevine (Vitis vinifera L.subsp. vinifera)

Dissertation presented in fulfillment of the requirements for the Degree of Doctor of Philosophy in Biology (Molecular Genetics) at the Instituto de Tecnologia Química e Biológica da Universidade Nova de Lisboa

Effects of Global Warming on Berry Composition of cv. Sangiovese: Biochemical and Molecular Aspects and Agronomical Adaptation Approaches

Wine grape must deal with serious problems due to the unfavorable climatic conditions resulted from global warming. High temperatures result in oxidative damages to grape vines. The excessive elevated temperatures are critical for grapevine productivity and survival and contribute to degradation of grape and wine quality and yield. Elevated temperature can negatively affect anthocyanin accumulation in red grape. Particularly, cv. Sangiovese was identified to be very sensitive to such condition. The quantitative real-time PCR analysis showed that flavonoid biosynthetic genes were slightly repressed by high temperature. Also, the heat stress repressed the expression of the transcription factor “VvMYBA1” that activates the expression of UFGT. Moreover, high temperatures had repressing effects on the activity of the flavonoids biosynthetic enzymes “PAL” and “UFGT”.Anthocyanin accumulation in berry skin is due to the balance between its synthesis and oxidation. In grape cv. Sangiovese, the gene transcription and activity of peroxidases enzyme was elevated by heat stress as a defensive mechanism of ROS-scavenging. Among many isoforms of peroxidases genes, one gene (POD 1) was induced in Sangiovese under thermal stress condition. This gene was isolated and evaluated via the technique of genes transformation from grape to Petunia. Reduction in anthocyanins concentration and higher enzymatic activity of peroxidase was observed in POD 1 transformed Petunia after heat shock compared to untrasformed control. Moreover, in wine producing regions, it is inevitable for the grape growers to adopt some adaptive strategies to alleviate grape damages to abiotic stresses. Therefore, in this thesis, the technique of post veraison trimming was done to improve the coupling of phenolic and sugar ripening in Vitis vinifera L. cultivar Sangiovese. Trimming after veraison showed to be executable to slow down the rate of sugar accumulation in grape (to decrease the alcohol potential in wines) without evolution of the main berry flavonoids compounds.

Effect of post-harvest ozone treatments on the skin phenolic composition and extractability of red winegrapes cv Nebbiolo and Berbera

Mestrado Vinifera Euromaster - Instituto Superior de Agronomia - UL

Environmental factors correlated with the metabolite profile of Vitis vinifera cv. Pinot Noir berry skins along a European latitudinal gradient

Mature berries of Pinot Noir grapevines were sampled across a latitudinal gradient in Europe, from southern Spain to central Germany. Our aim was to study the influence of latitude-dependent environmental factors on the metabolite composition (mainly phenolic compounds) of berry skins. Solar radiation variables were positively correlated with flavonols and flavanonols and, to a lesser extent, with stilbenes and cinnamic acids. The daily means of global and erythematic UV solar radiation over long periods (bud break-veraison, bud break-harvest, and veraison-harvest), and the doses and daily means in shorter development periods (5–10 days before veraison and harvest) were the variables best correlated with the phenolic profile. The ratio between trihydroxylated and monohydroxylated flavonols, which was positively correlated with antioxidant capacity, was the berry skin variable best correlated with those radiation variables. Total flavanols and total anthocyanins did not show any correlation with radiation variables. Air temperature, degree days, rainfall, and aridity indices showed fewer correlations with metabolite contents than radiation. Moreover, the latter correlations were restricted to the period veraison-harvest, where radiation, temperature, and water availability variables were correlated, making it difficult to separate the possible individual effects of each type of variable. The data show that managing environmental factors, in particular global and UV radiation, through cultural practices during specific development periods, can be useful to promote the synthesis of valuable nutraceuticals and metabolites that influence wine quality.

Effects and Modes od Action of Canopy Management Practices on Vine Physiology and Berry Composition in Organically-Cultivated cv. Sangiovese (Vitis Vinifera L.)

In organic and biodynamic vineyards, canopy management practices should be carefully and timely modulated, particularly in a context of climate change, for successfully achieving balanced plants, ventilated and exposed berries, elevated grape and wine quality. In 2013 and 2014, characterized by contrasting climatic conditions, the implications of post-veraison (late) or pea-size trimming, post-veraison or pre-harvest late defoliations and shoot-positioning (post-veraison) were assessed against long-shoots non treated controls, under field conditions on organically-cultivated cv. Sangiovese. The key agronomic and enological relevance of late trimming and defoliations clearly emerged in both seasons. Berry skin phenolics (e.g. anthocyanins, flavonols) increased markedly, without changes in technological parameters. In case of early trimming, such positive effects were observed only in 2013. Maintaining long shoots for shading decreased anthocyanins, flavonols and total phenolics concentrations and promoted the production of compact bunches. Experimental data strongly designated late trimming, a practice proved to contain yield and bunch compactness, as a valuable alternative to cluster thinning. Late trimming, defoliations and shoot positioning reduced the severity of Botrytis cluster rot. The highest levels of berry skins phenolic compounds in late trimmed and defoliated plants could have contributed control the severity of this pathogen. The enological benefits induced by late trimming and defoliations and shoot positioning emerged in both young and aged wines. For the first time, cell cultures from cv. Sangiovese berry tissues were obtained and enabled to investigate, in controlled conditions, the relations between mechanisms regulating secondary metabolism in grapevine cells and changes induced by environmental and agronomic factors. The Doctoral Dissertation strongly highlights the need to consider, for a proper interpretation of the multiple modifications induced by canopy management strategies, physiological mechanisms other than the canonic source-sink relationships, in particular their impact on the vine hormonal status.

Untersuchungen zur Lebensweise und zur Populationskontrolle des Gemeinen Ohrwurms Forficula auricularia L. (Insecta, Dermaptera) in Rebanlagen

Der Gemeine Ohrwurm (Forficula auricularia LINNAEUS 1758) wurde bisher im Weinbau als natürlicher Gegenspieler verschiedener Rebschädlinge zu den Nützlingen gezählt. Etwa seit 2005 verursacht er aufgrund stark ansteigender Populationsdichten Schäden in pfälzischen Rebanlagen. Ohrwürmer halten sich massenhaft in den Trauben auf. Zusammen mit ihren Exkrementen geraten sie bei der Lese in großer Zahl ins Erntegut. Die Tiere werden von der weinbaulichen Praxis als sehr störend und qualitätsmindernd empfunden und ihre Einstufung als Nützling kritisch gesehen. Aufgrund dieser Problematik wurde im Mai 2007 ein durch den Forschungsring des Deutschen Weinbaus (FDW) finanziertes Forschungsprojekt am Dienstleistungszentrum Ländlicher Raum Rheinpfalz in Neustadt an der Weinstraße begonnen. Bis 2010 wurden offene Fragen zur Erfassung und Populationsbiologie des Gemeinen Ohrwurms in Rebanlagen bearbeitet, die von ihm verursachten Schäden beschrieben und Strategien zu seiner Befallsregulation entwickelt. Am Boden aktive Ohrwürmer wurden mit Bodenfallen nach BARBER (1931) aufgenommen. In der Laubwand des Rebstockes wurden die Ohrwürmer mit eigens konzipierten Bambusfallen erfasst. F. auricularia ist in pfälzischen Rebanlagen die dominierende Ohrwurm-Art. Im Projektverlauf wurde der univoltine Entwicklungszyklus des Gemeinen Ohrwurms in pfälzischen Rebanlagen vollständig aufgeklärt. In der Vegetationsperiode beeinflussten die Intensität der Bodenbewirtschaftung mit der resultierenden Flächenbegrünung, die Bodenart, die Lufttemperatur, die Luftfeuchtigkeit und die Niederschlagsmenge die Befallsdichten am Rebstock signifikant. Der Ohrwurm-Befall in den Trauben war signifikant von der Kompaktheit und vom Gewicht der Trauben sowie dem Fäulnisanteil pro Traube und von eingewachsenen Rebblättern in den Trauben abhängig. Das Überwinterungs- und Brutverhalten wurde durch die Art und Weise der Bodenbewirtschaftung beeinflusst beziehungsweise gestört.rnLabor- und Freilandversuche haben gezeigt, dass F. auricularia Pilzpathogene wie die Graufäule (Botrytis cinerea PERSOON 1794) und den Pinselschimmel (Penicillium crustosum THOM 1930) auf gesunde Trauben überträgt. Ferner haben Fraßversuche ergeben, dass der Ohrwurm nur faule und vorgeschädigte Beeren anfressen kann und keine intakten Beeren verletzt. Durch analytische und sensorische Untersuchungen wurde festgestellt, dass Ohrwurm-Kot sensorische Fehltöne im Wein verursachen kann. Diese werden durch das im Kot enthaltene 2-Methyl-1,4-benzochinon hervorgerufen, das eine Komponente des arteigenen Abwehrsekrets ist. Da sich der Ohrwurm jahreszeitlich bedingt entweder im Boden oder am Rebstock aufhält, wurden befallsregulierende Maßnahmen im Boden- und Laubwandbereich der Rebanlage durchgeführt. Durch Tiefengrubbern mit Umbruch der Begrünung im Herbst und Frühjahr wurden die überwinternden Imagines und die Gelege geschädigt, so dass in der darauf folgenden Vegetationsperiode die Befallsdichten in der Laubwand geringfügig aber nicht signifikant abnahmen. Die während der Aufwanderungsphase der Ohrwürmer Ende Juni durchgeführte mechanische Störung der Begrünung reduzierte den Ohrwurm-Befall am Rebstock bis zu drei Wochen nach der Maßnahme signifikant. In der Laubwand der Rebstöcke wurden die Befallsdichten durch die Insektizide SpinTor (Wirkstoff Spinosad: 0,01%) und Steward® (Wirkstoff Indoxacarb: 0,0125 %) sowie sekundär durch partielles Entblättern der Laubwand dauerhaft bis zur Traubenlese reduziert. rn

Effetti della defogliazione tardiva sulla composizione della bacca di Sangiovese (Vitis vinifera L.) in un vigneto biologico

In a context of climatic change, where high temperatures are frequent in the first phases of ripening, protecting bunches from solar radiation is essential to preserve berry colors. This thesis reports data collected in 2015 within a 3-year experiment conducted in Tebano (Faenza, Italy) in an organically-managed vineyard. Vines of cv Sangiovese submitted to post-veraison (15 Brix), pre-harvest late defoliation and post-veraison shoot positioning were compared with untreated controls. Treatments did not modify berry skin anthocyanins and flavonols, berry weight, soluble solids, pH, titratable acidity. Data are discussed in terms of the relevance of preserving berry skin anthocyanins and increasing berry skin flavonols through sustainable agronomic approaches for improving the color of young (co-pigmentation) and older (formation of polymeric pigments) wines. The benefits of late defoliations as an effective tool against Botrytis cluster rot are also discussed.

Mineral stress response of Vitis cell wall transcriptome: identification, characterization and expression of genes from key families involved in wall biosynthesis and modification

Doutoramento em Engenharia Agronómica - Instituto Superior de Agronomia - UL

Impacts of crop level, soil and irrigation management in grape berries of cv ‘Trincadeira’ (Vitis vinifera L.)

Berry size and crop yield are widely recognized as important factors that contribute to wine quality. The final berry size indirectly affects the phenolic concentration of the wine due to skin surface-to-berry volume ratio. The effects of different irrigation levels, soil management and plant crop level on growth of ‘Trincadeira’ berries were studied. In order to test the influence of different irrigation levels (rainfed, pre-veraison and post-veraison), different soil management (tillage and natural cover crops) and different plant crop levels (8 and 16 clusters per vine), leaf water potential, skin anthocyanin, polyphenols, berry skin and seed fresh weight were measured in fruits. The segregation of berries into three different berry classes: small, medium and large, allowed to identify different levels of contribution of soil management and irrigation level into berry, skin and seeds ratios. As expected, higher water availability due to irrigation and soil tillage management during berry development induced an increase in berry flesh weight and this was more evident in larger berries; however, berry skin and seed fresh weight remained unchanged. Also, anthocyanins did not show significant differences.

Phenolic composition of the berry parts of hybrid grape cultivar BRS Violeta (BRS Rubea×IAC 1398-21) using HPLC-DAD-ESI-MS/MS

The grape is considered a major source of phenolic compounds when compared to other fruits and vegetables, however, there are many cultivars with distinct characteristics directly linked to phenolic profile. Thus, the present study aimed to identify and quantify, for the first time and in detail, the phenolic compounds present in the skin, flesh and seeds of BRS Violeta grape berry using combination of SPE methodologies and analytical HPLC-DAD-ESI-MS/MS. The study was extended to the different berry parts and the most important grape and wine phenolic families, and has revealed interesting features. Violeta grape has a very thick skin (46% of grape weight) that accumulated the most of grape phenolic compounds: great amount of anthocyanins (3930. mg/kg, as malvidin 3,5-diglucoside), together with also important amounts of flavonols (150. mg/kg, as quercetin 3-glucoside), hydroxycinnamic acid derivatives (HCAD; 120. mg/kg, as caftaric acid), and proanthocyanidins (670. mg/kg, as (+)-catechin); in contrast, it seems to be a low resveratrol producer. Violeta grape seeds accounted for similar proportions of low molecular weight flavan-3-ols (mainly monomers; 345. mg/kg, as (+)-catechin) and proanthocyanidins (480. mg/kg, as (+)-catechin). Violeta grape is a teinturier cultivar, but it only contained traces of anthocyanins and low amounts of all the other phenolic types in its red-colored flesh. The anthocyanin composition of Violeta grape was dominated by anthocyanidin 3,5-diglucosides (90%). Within flavonols, myricetin-type predominated and kaempferol-type was missing. In addition to expected hydroxycinnamoyl-tartaric acids, several isomeric esters of caffeic and p-coumaric acids with hexoses were tentatively identified, accounting for relevant proportions within the pool of HCAD. Although pending of further confirmation over successive vintages, the aforementioned results suggest that BRS Violeta grape cultivar could be considered an interesting candidate for the elaboration of highly colored and antioxidant-rich grape juices and wines. © 2013 Elsevier Ltd.