The effects of added glycerol or unprotected free fatty acids or a combination of the two on silage intake, milk production, rumen fermentation and diet digestibility in cows given grass silage based diets

Selostus: Väkirehuun lisätyn glyserolin tai vapaiden rasvahappojen tai näiden yhdistelmän vaikutus maidontuotantoon ja pötsifermentaatioon ruokittaessa lypsylehmiä säilörehuun perustuvalla ruokinnalla

Effects of and interactions between the extent of silage fermentation and protein and protein supplementation in lactating dairy cows

Selostus: Säilörehun käymisasteen ja valkuaistäydennyksen vaikutus maidon tuotantoon

Synteesikaasun liukoisuus ja aineensiirto fermentointiliuokseen

Työssä tutkittiin synteesikaasun komponenttien: hiilimonoksidin, vedyn ja hiilidioksidin liukoisuutta ja aineensiirtonopeutta fermentointiliuokseen. Kirjallisuusosassa käsitellään kaasujen liukoisuuksiin ja kaasu-nesteaineensiirtoon vaikuttavia tekijöitä ja esitellään korrelaatioita, jotka on kehitetty volumetrisen aineensiirtokertoimen ennustamiseen sekoitetussa fermentorissa. Kirjallisuus-osassa esitetään myös synteesikaasun komponenttien liukoisuudet veteen, etanoliin ja etikkahappoon 37 ºC lämpötilassa ja esitellään Flowbat-simulointiohjelman MHV2-mallin käyttöä kaasu-neste tasapainojen mallin-nuksessa. Työn kokeellisessa osassa tutkittiin synteesikaasun komponenttien liukoisuuksia veteen ja kasvatusalustaan sekä kehitettiin mittausmenetelmä kaasu-neste tasapainojen mittaukseen. Tasapainomittauksissa tutkittiin etanolin ja etikkahapon konsentraatioiden vaikutusta synteesikaasun liukoisuuteen. Lisäksi mallinnettiin kaasu-neste tasapainoja monikomponenttisysteemeissä MHV2-mallin avulla. Kokeellisen osan aineensiirtomittauksissa tutkittiin sekoitusnopeuden ja kaasun volumetrisen syöttönopeuden vaikutusta hiilimonoksidin ja vedyn volumetriseen aineensiirtokertoimeen kLa kahden litran tilavuuksisessa laboratoriofermentorissa. Mittaustulosten perusteella kasvatusalustan komponentit vaikuttavat merkittävästi hiilidioksidin liukoisuuteen. Lisäys etanolin ja etikkahapon konsentraatioissa parantaa hiilimonoksidin liukoisuutta kasvatusalustaan. Kaasun volumetrinen syöttönopeus ja sekoitusnopeus vaikuttavat voimakkaasti volumetrisen aineensiirtokertoimen arvoon. Tutkitussa systeemissä korkein teoreettinen solutiheys, joka voitiin saavuttaa suurimmalla hiilimonoksidin aineensiirto-nopeudella, oli 3 g/L. Tämä on kaksinkertainen verrattuna aiemmissa VTT:n kokeissa saavutettuihin solutiheyksiin.

Design and production of protein nanostructures for biomolecular detection

Particulate nanostructures are increasingly used for analytical purposes. Such particles are often generated by chemical synthesis from non-renewable raw materials. Generation of uniform nanoscale particles is challenging and particle surfaces must be modified to make the particles biocompatible and water-soluble. Usually nanoparticles are functionalized with binding molecules (e.g., antibodies or their fragments) and a label substance (if needed). Overall, producing nanoparticles for use in bioaffinity assays is a multistep process requiring several manufacturing and purification steps. This study describes a biological method of generating functionalized protein-based nanoparticles with specific binding activity on the particle surface and label activity inside the particles. Traditional chemical bioconjugation of the particle and specific binding molecules is replaced with genetic fusion of the binding molecule gene and particle backbone gene. The entity of the particle shell and binding moieties are synthesized from generic raw materials by bacteria, and fermentation is combined with a simple purification method based on inclusion bodies. The label activity is introduced during the purification. The process results in particles that are ready-to-use as reagents in bioaffinity. Apoferritin was used as particle body and the system was demonstrated using three different binding moieties: a small protein, a peptide and a single chain Fv antibody fragment that represents a complex protein including disulfide bridge.If needed, Eu3+ was used as label substance. The results showed that production system resulted in pure protein preparations, and the particles were of homogeneous size when visualized with transmission electron microscopy. Passively introduced label was stably associated with the particles, and binding molecules genetically fused to the particle specifically bound target molecules. Functionality of the particles in bioaffinity assays were successfully demonstrated with two types of assays; as labels and in particle-enhanced agglutination assay. This biological production procedure features many advantages that make the process especially suited for applications that have frequent and recurring requirements for homogeneous functional particles. The production process of ready, functional and watersoluble particles follows principles of “green chemistry”, is upscalable, fast and cost-effective.

Feasibility study for acidic biorefinery concept

The integration a recovery process for spent sulfite liquor from a sulfite cooking process with a kraft pulp mill was studied in this thesis work. The process includes a fermentation process for the production of biofuel. The calculation for three cases was done. The three cases considered were with a spruce sulfite pulp production of 100, 250 and 1000 Adt/day corresponding to 10, 25 and 100% of the total pulp production. A kraft cooking process with prehydrolysis was taken in consideration as reference. Compared to kraft cooking with prehydrolysis a bigger amount of ethanol can be produced by sulfite cooking. In the kraft prehydrolysis case 40 t/day of ethanol and 1000 Adt/day pine pulp is produced and in the sulfite case the production is 113 t/day of ethanol and 1000 Adt/day of spruce pulp. The energy consumption in the sulfite process is assumed to be slightly higher than in the kraft prehydrolysis process. The recovery system for spent liquor mix was studied. The evaporation of the spent cooking liquors should be done separately. The approximately composition of melt was calculated. A comparison of all four cases was done and profitability was estimated.

CFD Simulation of Two-phase and Three-phase Flows in Internal-loop Airlift

Airlift reactors are pneumatically agitated reactors that have been widely used in chemical, petrochemical, and bioprocess industries, such as fermentation and wastewater treatment. Computational Fluid Dynamics (CFD) has become more popular approach for design, scale-up and performance evaluation of such reactors. In the present work numerical simulations for internal-loop airlift reactors were performed using the transient Eulerian model with CFD package, ANSYS Fluent 12.1. The turbulence in the liquid phase is described using κ- ε the model. Global hydrodynamic parameters like gas holdup, gas velocity and liquid velocity have been investigated for a range of superficial gas velocities, both with 2D and 3D simulations. Moreover, the study of geometry and scale influence on the reactor have been considered. The results suggest that both, geometry and scale have significant effects on the hydrodynamic parameters, which may have substantial effects on the reactor performance. Grid refinement and time-step size effect have been discussed. Numerical calculations with gas-liquid-solid three-phase flow system have been carried out to investigate the effect of solid loading, solid particle size and solid density on the hydrodynamic characteristics of internal loop airlift reactor with different superficial gas velocities. It was observed that averaged gas holdup is significantly decreased with increasing slurry concentration. Simulations show that the riser gas holdup decreases with increase in solid particle diameter. In addition, it was found that the averaged solid holdup increases in the riser section with the increase of solid density. These produced results reveal that CFD have excellent potential to simulate two-phase and three-phase flow system.

Adsorptive removal of harmful organic compound from aqueous solutions

Adsorption is one of the most commonly used methods in water treatment processes. It is attractive due to it easy operation and the availability of a wide variety of commercial adsorbents. This doctoral thesis focuses on investigating and explaining the influence of external phase conditions (temperature, pH, ionic strength, acidity, presence of cosolutes) on adsorption phenomena. In order to cover a wide range of factors and phenomena, case studies were chosen from various fields where adsorption is applied. These include the adsorptive removal of surface active agents (used in cleaning chemicals, for example) from aqueous effluents, the removal of hormones (estradiol) from drinking water, and the adsorption of antibiotics onto silica. The latter can beused to predict the diffusion of antibiotics in the aquatic system if they are released into the environment. Also the adsorption of living cells on functionalized polymers to purify infected water streams was studied. In addition to these examples, the adsorptive separation of harmful compounds from internal water streams within a chemical process was investigated. The model system was removal of fermentation inhibitors from lignocelluloses hydrolyzates. The detoxification of the fermentation broth is an important step in the manufacture of bioethanol from wood, but has not been studied previously in connection with concentrated acid hydrolyzates. New knowledge on adsorption phenomena was generated for all of the applications investigated. In most cases, the results could be explained by combining classical theories for individual phenomena. As an example, it was demonstrated how liquid phase aggregation could explain abnormal-looking adsorption equilibrium data. In addition to the fundamental phenomena, also process performance was of interest. This aspect is often neglected in adsorption studies. It was demonstrated that adsorbents should not be selected for a target application based on their adsorption properties only, but regeneration of the spent adsorbent must be considered. It was found that using a suitable amount of organic co-solvent in the regeneration can significantly improve the productivity of the process.

Identifying and Characterizing New Ingredients in vitro for Prebiotic and Synbiotic use

The endogenous microbiota, constituting the microbes that live inside and on humans, is estimated to outnumber human cells by a factor of ten. This commensal microbial population has an important role in many physiological functions, with the densest microbiota population found in the colon. The colonic microbiota is a highly complex and diverse bacterial ecosystem, and a delicate balance exists between the gut microbiota and its host. An imbalance in the microbial ecosystem may lead to severe symptoms in and also beyond the gastrointestinal tract. Due to the important role of the gut microbiota in human health, means of its modification have been introduced in the dietary concepts of pro-, pre- and synbiotics. Prebiotics, which are usually carbohydrates, strive to selectively influence beneficial microbes resident in the colon with the aim of modifying the composition and functionality of the commensal microbial population towards a purportedly healthier one. The study of prebiotic effects on colonic micro-organisms is typically done by using human faecal material, though this provides relatively little information on bacterial populations and metabolic events in different parts of the colon. For this reason, several in vitro models have been developed to investigate the gut microbiota. The aim of this doctoral thesis was to screen through some of the promising prebiotic candidates, characterize their effects on the microbiota through the use of two in vitro methods (pure microbial cultures and a colon simulator model) and to evaluate their potential as emerging prebiotics or synbiotics when combined with the probiotic Bifidobacterium lactis . As a result of the screening work and subsequent colon simulation studies, several compounds with promising features were identified. Xylo-oligosaccharides (XOS), which have previously already shown promise as prebiotic compounds, were well fermented by several probiotic Bifidobacterium lactis strains in pure culture studies and in the following simulation studies utilizing the complex microbiota by endogenous B. lactis Another promising compound was panose, a trisaccharide belonging to isomalto-oligosaccharides (IMO) that also was also able to modify the microbiota in vitro by increasing the number of beneficial microbes investigated. Panose has not been widely studied previously and therefore, this thesis work provided the first data on panose fermentation in mixed colonic microbiota. Galacto-oligosaccharide (GOS) is an established prebiotic, and it was studied here in conjunction with another potential polygosaccharide polydextrose (PDX) and probiotic B. lactis Bi-07. In this final study, the synbiotics including GOS were more effective than the constituting pro- or prebiotics alone in modulating the microbiota composition, thus indicating a synergy resulting from the combination. The results obtained in this in vitro work can be, and have already been, utilized in product development aimed at the nutritional modification of the human colonic microbiota. Some of the compounds have entered the human clinical intervention phase to nvestigate in more detail the prebiotic and synbiotic properties seen in these in vitro studies.

Roal Oy:n käyttöhyödykejärjestelmän arviointi, optimointi ja raportointi

Prosessiteollisuudessa tarvitaan usein erilaisia apujärjestelmiä pääprosessin tueksi. Tyypillisiä tällaisia järjestelmiä ovat jäähdytys-, höyry- ja ilmajärjestelmät. Hyödykejärjestelmien kehitys jää helposti pääprosessin varjoon, joka usein johtaa tarpeettoman suuriin hyödykekustannuksiin ja järjestelmien teknisen tilan laskuun. Työn kirjallisuusosassa käsitellään Roal Oy:n fermentointiprosessin kannalta olennaisimpia hyödykevaatimuksia, niiden laskennallista ilmaisua ja vuorovaikutuksia sekä PINCH-menetelmää lämpöenergian hyötykäyttöön. Jäähdytysjärjestelmän osalta käydään läpi merkittävimmät laitetekniset ratkaisut, jäähdytystorni ja lämpöpumppu, toimintaperiaatteineen sekä luonnonvesien käyttö jäähdytykseen. Työn soveltavassa osassa seurattiin Aspergillus, Trichoderma ja Bacillus fermentointeja, joiden pohjalta luotiin kasvatuskohtainen empiirinen malli jäähdytystarpeen arviointiin perustuen sekoitustehoon, kasvatuksen hiilidioksidituottoon ja haihtumisen vaikutukseen. Kasvatuksien aikana seurattiin myös tilavuusperusteista lämmönsiirtokerrointa. Mitattujen lämmönsiirtokertoimien perustella laskettiin ominaislämmöntuottoon perustuva maksimilämpötila käytettävälle jäähdytysvedelle ja fermentorien maksimitilavuudet tunnetuilla kasvatusparametreilla eri lämpöisille jäähdytysvesille. Soveltavassa osassa käydään myös läpi Roalin höyry- ja kuumavesikulutukset ja tärkeimmät käyttökohteet. Mittaustulosten ja mallien perusteella on tehtiin kehitysehdotukset hyödykejärjestelmän optimoimiseksi.

Kartonkijätteestä bioetanolia - Hydrolysoitujen sokerien erotus ja väkevöinti fermentointia varten

Tässä diplomityössä tutkittiin upotettavien membraanisuodattimien soveltuvuutta sakean hydrolysaattin suodattamiseen ja esisuodatettujen sokereiden väkevöintiä membraanisuodatuksella fermentointia varten. Työssä käytettiin kierrätyskartongista entsyymien avulla valmistettua hydrolysaattia. Sakean hydrolysaatin suodattamiseen käytettiin Kubota Membranesin upposuodatusmoduuleja ja suodatuslaitteistoa. Upposuodatusmoduulien likaantumisen vähentämiseksi suodatuksissa käytettiin ilmasekoitusta ja vastavirta-pesua. Upposuodatusmoduulilla kirkastettua hydrolysaattia väkevöitiin nanosuodatuksella ja tulosta verrattiin painesuodatuksella kirkastetun hydrolysaatin nanosuodatukseen. Konsentrointisuodatusten alussa testattiin neljää nanosuodatuskalvoa hydrolysaatin konsentrointiin. Sokereiden konsentrointiin valittiin Dow FilmTecTM NF-270 nanosuodatuskalvo sen korkean sokeriretention ja hyvän vuon perusteella. Sakean hydrolysaatin esisuodatuksessa ei upotettavien membraanimoduulien ja painesuodatuksen välillä havaittu merkittäviä eroja. Työn perusteella upposuodatusmoduulien käyttö sakean hydrolysaatin suodattamisessa on kuitenkin mahdollista. Tämä mahdollistaisi sokereiden jatkuvatoimisen erottamisen hydrolysaatista. Konsentrointisuodatuksissa molemmilla esisuodatetuilla hydrolysaateilla saavutettiin yli 10 % sokerikonsentraatio ilman suurta sokerihävikkiä. Sokeriretentio pysyi myös konsentraation kasvaessa 80 % yläpuolella.

Biomassahydrolysaattien puhdistus uutolla

Lignoselluloosasta koostuvasta biomassasta valmistetaan hydrolysoimalla sokereita, jotka jatkojalostetaan fermentoimalla bioetanoliksi. Bioetanolia käytetään fossiilisten polttoaineiden korvaajana esimerkiksi ajoneuvoissa. Bioetanolin valmistuksessa pyritään mahdollisimman hyvään saantoon, jotta sen valmistus olisi taloudellisesti kannattavaa. Hydrolyysin aikana syntyy sokerien lisäksi orgaanisia happoja, furaanin johdannaisia sekä fenolisia yhdisteitä. Yleisimpiä syntyviä yhdisteitä ovat muun muassa etikkahappo, furfuraali ja hydroksimetyylifurfuraali. Nämä yhdisteet haittaavat sokerien fermentointiprosessia ja pienentävät etanolin saantoa. Fermentointiprosessia haittaavien yhdisteiden poistoon hydrolysaattiliuoksesta voidaan käyttää esimerkiksi haihdutusta, membraanierotusta, adsorptiota, saostusta, sekä uuttoa. Tämän työn tarkoituksena oli tutkia leikkaussekoittimen soveltuvuutta biomassahydrolysaatin epäpuhtauksien erotukseen. Lisäksi kirjallisuusosassa on esitetty hydrolysointiprosessissa syntyviä haitta-aineita ja niiden erotusmenetelmiä.

Ionic liquid mediated biomass deconstruction: from analysis challenges to fermentable sugars

Ionic liquids, ILs, have recently been studied with accelerating interest to be used for a deconstruction/fractionation, dissolution or pretreatment processing method of lignocellulosic biomass. ILs are usually utilized combined with heat. Regarding lignocellulosic recalcitrance toward fractionation and IL utilization, most of the studies concern IL utilization in the biomass fermentation process prior to the enzymatic hydrolysis step. It has been demonstrated that IL-pretreatment gives more efficient hydrolysis of the biomass polysaccharides than enzymatic hydrolysis alone. Both cellulose (especially cellulose) and lignin are very resistant towards fractionation and even dissolution methods. As an example, it can be mentioned that softwood, hardwood and grass-type plant species have different types of lignin structures leading to the fact that softwood lignin (guaiacyl lignin dominates) is the most difficult to solubilize or chemically disrupt. In addition to the known conventional biomass processing methods, several ILs have also been found to efficiently dissolve either cellulose and/or wood samples – different ILs are suitable for different purposes. An IL treatment of wood usually results in non-fibrous pulp, where lignin is not efficiently separated and wood components are selectively precipitated, as cellulose is not soluble or degradable in ionic liquids under mild conditions. Nevertheless, new ILs capable of rather good fractionation performance have recently emerged. The capability of the IL to dissolve or deconstruct wood or cellulose depends on several factors, (e.g. sample origin, the particle size of the biomass, mechanical treatments as pulverization, initial biomassto-IL ratio, water content of the biomass, possible impurities of IL, reaction conditions, temperature etc). The aim of this study was to obtain (fermentable) saccharides and other valuable chemicals from wood by a combined heat and IL-treatment. Thermal treatments alone contribute to the degradation of polysaccharides (e.g. 150 °C alone is said to cause the degradation of polysaccharides), thus temperatures below that should be used, if the research interest lies on the IL effectiveness. On the other hand, the efficiency of the IL-treatment can also be enhanced to combine other treatment methods, (e.g. microwave heating). The samples of spruce, pine and birch sawdust were treated with either 1-Ethyl-3-methylimidazolium chloride, Emim Cl, or 1-Ethyl-3-methylimidazolium acetate, Emim Ac, (or with ionized water for comparison) at various temperatures (where focus was between 80 and 120 °C). The samples were withdrawn at fixed time intervals (the main interest treatment time area lied between 0 and 100 hours). Double experiments were executed. The selected mono- and disaccharides, as well as their known degradation products, 5-hydroxymethylfurfural, 5-HMF, and furfural were analyzed with capillary electrophoresis, CE, and high-performance liquid chromatography, HPLC. Initially, even GC and GC-MS were utilized. Galactose, glucose, mannose and xylose were the main monosaccharides that were present in the wood samples exposed to ILs at elevated temperatures; in addition, furfural and 5-HMF were detected; moreover, the quantitative amount of the two latter ones were naturally increasing in line with the heating time or the IL:wood ratio.