Measuring reef complexity and rugosity from monocular video bathymetric reconstruction

Topographic structural complexity of a reef is highly correlated to coral growth rates, coral cover and overall levels of biodiversity, and is therefore integral in determining ecological processes. Modeling these processes commonly includes measures of rugosity obtained from a wide range of different survey techniques that often fail to capture rugosity at different spatial scales. Here we show that accurate estimates of rugosity can be obtained from video footage captured using underwater video cameras (i.e., monocular video). To demonstrate the accuracy of our method, we compared the results to in situ measurements of a 2m x 20m area of forereef from Glovers Reef atoll in Belize. Sequential pairs of images were used to compute fine scale bathymetric reconstructions of the reef substrate from which precise measurements of rugosity and reef topographic structural complexity can be derived across multiple spatial scales. To achieve accurate bathymetric reconstructions from uncalibrated monocular video, the position of the camera for each image in the video sequence and the intrinsic parameters (e.g., focal length) must be computed simultaneously. We show that these parameters can be often determined when the data exhibits parallax-type motion, and that rugosity and reef complexity can be accurately computed from existing video sequences taken from any type of underwater camera from any reef habitat or location. This technique provides an infinite array of possibilities for future coral reef research by providing a cost-effective and automated method of determining structural complexity and rugosity in both new and historical video surveys of coral reefs.

Workflow patterns as a means to model task succession in games – a preliminary case study

Over about the last decade, people involved in game development have noted the need for more formal models and tools to support the design phase of games. It is argued that the present lack of such formal tools is currently hindering knowledge transfer among designers. Formal visual languages, on the other hand, can help to more effectively express, abstract and communicate game design concepts. Moreover, formal tools can assist in the prototyping phase, allowing designers to reason about and simulate game mechanics on an abstract level. In this paper we present an initial investigation into whether workflow patterns – which have already proven to be effective for modeling business processes – are a suitable way to model task succession in games. Our preliminary results suggest that workflow patterns show promise in this regard but some limitations, especially in regard to time constraints, currently restrict their potential.

Bathymetric surveys and lake deposits

A progress report on the bathymetric survey of Windereme undertaken in June 1937 by the Hydrographic Department of the Admiralty. The brief article outlines the background of the surveying process as well as the initial effectiveness of the survey work. There is a brief background to the geomorphological processes which were involved in shaping the Lake District topography, as well as some explanation of previous studies undertaken in the area. The report includes a figure showing the cross sections of lake beds and a figure detailing a core from the bottom deposits of Windermere.

Caracterização espaço-temporal de plumas de sedimentos por sensoriamento remoto: um estudo de caso na foz do rio Paraíba do Sul.

Sedimentos em suspensão representam um dos principais fatores que afetam a qualidade dos sistemas aquáticos no mundo; influenciam os processos geomórficos de construção da paisagem e podem indicar problemas de erosão e perda de solo na bacia hidrográfica contribuinte. O seu monitoramento espacial e temporal é fundamental nas atividades de gestão ambiental de áreas costeiras. Nesse sentido, a hipótese básica desta pesquisa é que o padrão espacial e temporal de plumas de sedimentos costeiras associado ao regime hidrológico do rio pode ser caracterizado a partir de imagens orbitais de média resolução espacial. Para comprová-la, elegeu-se a foz do rio Paraíba do Sul como área de estudo para definição e teste metodológico, e formulou-se como principal objetivo mapear qualitativamente a pluma costeira deste rio a partir de imagens Landsat 5 e CBERS-2, ao longo do período compreendido entre 1985 e 2007. As datas avaliadas foram criteriosamente definidas através de três estratégias de análise, totalizando cinqüenta imagens. Pesquisa bibliográfica e avaliação da resposta espectral da feição de interesse nas imagens selecionadas consistiram nas etapas principais da definição da metodologia. As plumas foram então identificadas, mapeadas e extraídas; posteriormente, suas características espaciais e temporais foram analisadas por intermédio de sistemas de informação geográfica e avaliadas em conjunto com dados históricos de vazão. Os resultados indicam que a banda do vermelho forneceu uma melhor discriminação interna da pluma, sendo, portanto, utilizada como base para as análises realizadas neste trabalho. Com exceção do procedimento de correção atmosférica, a metodologia proposta consiste na utilização de técnicas simples de processamento digital de imagens, baseadas na integração de técnicas semi-automáticas e de análise visual. A avaliação do padrão dos sedimentos e dos mapas temáticos qualitativos de concentração de sedimentos em suspensão indica a forte diferenciação existente entre cenários representativos de épocas de cheia e seca do rio. Análises espaciais do comportamento da pluma contribuem ainda para um maior conhecimento do espaço geográfico, fornecendo subsídios aos mais variados setores do planejamento e gestão ambiental.

Interações sobre a pluviosidade em encostas de clima tropical úmido e os movimentos de massa: o caso de sub-bacias do Alto Rio São João - RJ

Cada vez são mais comuns problemas relacionados a movimentos de massa nas encostas de clima tropical no Estado do Rio de Janeiro, especialmente na Serra do Mar, provocados por acumulados pluviométricos intensos. A ocupação humana desordenada de áreas sensíveis a tais processos geomorfológicos, bem como as condicionantes geológicas, geomorfológicas, pedológicas e de uso e cobertura do solo são apontadas como fatores cruciais na explicação desses processos. O maior conhecimento da dinâmica pluviométrica bem como suas interações com tais aspectos físicos ligados ao relevo parece ser a chave dessa maior compreensão desses fenômenos. Assim foram realizadas pesquisas relacionadas aos volumes e intensidades das chuvas na região do Alto Curso do Rio São João, bem como uma análise dos movimentos de massa identificados através de imagens de satélite e in loco, como forma de fornecer subsídios à melhor gestão do espaço dessas regiões montanhosa estão vulneráveis a movimentos de massa. A correlação entre os acumulados e a intensidade pluviométrica com fenômenos climáticos de escala global, como El Niño e La Niña também foi contemplada nessa pesquisa, mostrando uma relação mais alta com relação à intensidade da chuva mensal para anos de El Niño e para anos de La Niña uma reduzida ocorrência dessas intensidades pluviométricas. Os estudos revelaram que os tipos de solos e sua cobertura e uso têm uma grande influência na deflagração de movimentos de massa. Foram observados um número reduzido de movimentos de massa em áreas naturais e uma maior proporção desses movimentos em áreas utilizadas para a atividade da pecuária na região. Grande parte dos movimentos de massa ocorreram em áreas de Cambissolos (áreas mais elevadas) e Latossolos (áreas de encostas em menores altitudes). Ambos os solos são mais espessos do que os encontrados em áreas mais declivosas, apresentando maior acúmulo de materiais a serem mobilizados durante grandes acumulados pluviométricos, gerando movimentos de massa. A análise mostrou também que áreas mais chuvosas e com maior ocorrência de acumulados pluviométricos extremos, acima de 100 mm/dia e acima de 30mm/mês concentraram um número maior de movimentos de massa, como a região mais próxima da estação de Quartéis (porção leste). Por outro lado áreas bastante elevadas, com altas declividades, porém com predomínio de Mata Atlântica e áreas com solos menos espessos, como os Neossolos Litólicos, se mostraram com um número reduzido desses processos. Enfim esse estudo mostrou a necessidade de se gerir melhor os espaços dessas áreas sensíveis sob o ponto de vista geomorfológico, até por que são áreas na periferia de regiões densamente habitadas e cujas demandas tendem a se tornar cada vez mais marcantes, o que pode gerar problemas locais, atingindo sua população e economia, com sérias conseqüências para o ambiente.

Use of genetic data to assess the uncertainty in stock assessments due to the assumed stock structure: the case of albacore (Thunnus alalunga) from the Atlantic Ocean

Stock assessments can be problematic because of uncertainties associated with the data or because of simplified assumptions made when modeling biological processes (Rosenberg and Restrepo, 1995). For example, the common assumption in stock assessments that stocks are homogeneous and discrete (i.e., there is no migration between the stocks) is not necessarily true (Kell et al., 2004a, 2004b).

River Eden RHS and geomorphology evaluation. Final report October 2001

This is the River Eden RHS and geomorphology evaluation: Final report October 2001 produced by the Environment Agency North West in 2001. This report analysed the River Habitat Survey (RHS) and geomorphology data to evaluate the level of habitat quality and the geomorphological characteristics of the River Eden and sub-catchments. RHS data and geomorphological assessment data was collected within the study areas by CEH and Fluvial Environmental Services Ltd. The River Eden and its sub-catchments are being considered as a Special Area for Conservation (SAC) due to the presence of habitat types and species, which are rare or threatened within Europe. The purpose of the project is to provide an overview of the state of the catchment in terms of river habitats and geomorphological processes in order to aid the derivation of sound management for this proposed SAC.The aim of this report was to determine the state of the environment within the Eden and sub-catchments and identify the main pressures on the system in order to derive sound management options.

柔性制造系统中死锁避免的充要条件第一部分：资源竞争过程的建模

柔性制造系统的主要特点是多种不同类型的工件同时在系统中加工，这些工件竞争系统的有限资源，导致象系统死锁等这样的不希望事件的发生，本文用一种Ｐｅｔｒｉ网模型，称之为着色面向资源的Ｐｅｔｒｉ网（着色ＲＯＰＮ）来描述系统中的这一竞争过程；这一模型揭示了资源竞争过程的本质特点，从而为寻求死锁避免的充要条件提供了基础。

Changing climate, changing process: implications for salt transportation and weathering within building sandstones in the UK

Salt weathering is a crucial process that brings about a change in stone, from the scale of landscapes to stone outcrops and natural building stone facades. It is acknowledged that salt weathering is controlled by fluctuations in temperature and moisture, where repeated oscillations in these parameters can cause re-crystallisation, hydration/de-hydration of salts, bringing about stone surface loss in the form of, for example, granular disaggregation, scaling, and multiple flaking. However, this ‘traditional’ view of how salt weathering proceeds may need to be re-evaluated in the light of current and future climatic trends. Indeed, there is considerable scope for the investigation of consequences of climate change on geomorphological processes in general. Building on contemporary research on the ‘deep wetting’ of natural building stones, it is proposed that (as stone may be wetter for longer), ion diffusion may become a more prominent mechanism for the mixing of molecular constituents, and a shift in focus from physical damage to chemical change is suggested. Data from ion diffusion cell experiments are presented for three different sandstone types, demonstrating that salts may diffuse through porous stone relatively rapidly (in comparison to, for example, dense concrete). Pore water from stones undergoing diffusion experiments was extracted and analysed. Factors controlling ion diffusion
relating to ‘time of wetness’ within stones are discussed, (continued saturation, connectivity of pores, mineralogy, behaviour of salts, sedimentary structure), and potential changes in system dynamics as a result of climate change are addressed. System inputs may change in terms of increased moisture input, translating into a greater depth of wetting front. Salts are likely to be ‘stored’ differently in stones, with salt being in solution for longer periods (during prolonged winter wetness). This has myriad implications in terms of the movement of ions by diffusion and the potential for chemical change in the stone (especially in more mobile constituents), leading to a weakening of the stone matrix/grain boundary cementing. The ‘output’ may be mobilisation and precipitation of elements leading to, for example, uneven cementing in the stone. This reduced strength of the stone, or compromised ability of the stone to absorb stress, is likely to make crystallisation a more efficacious mechanism of decay when it does occur. Thus, a delay in the onset of crystallisation while stonework is wet does not preclude exaggerated or accelerated material loss when it finally happens.

Control of uncertain compartmental systems

Os sistemas compartimentais são frequentemente usados na modelação de diversos processos em várias áreas, tais como a biomedicina, ecologia, farmacocinética, entre outras. Na maioria das aplicações práticas, nomeadamente, aquelas que dizem respeito à administração de drogas a pacientes sujeitos a cirurgia, por exemplo, a presença de incertezas nos parâmetros do sistema ou no estado do sistema é muito comum. Ao longo dos últimos anos, a análise de sistemas compartimentais tem sido bastante desenvolvida na literatura. No entanto, a análise da sensibilidade da estabilidade destes sistemas na presença de incertezas tem recebido muito menos atenção. Nesta tese, consideramos uma lei de controlo por realimentação do estado com restrições de positividade e analisamos a sua robustez quando aplicada a sistemas compartimentais lineares e invariantes no tempo com incertezas nos parâmetros. Além disso, para sistemas lineares e invariantes no tempo com estado inicial desconhecido, combinamos esta lei de controlo com um observador do estado e a robustez da lei de controlo resultante também é analisada. O controlo do bloqueio neuromuscular por meio da infusão contínua de um relaxante muscular pode ser modelado como um sistema compartimental de três compartimentos e tem sido objecto de estudo por diversos grupos de investigação. Nesta tese, os nossos resultados são aplicados a este problema de controlo e são fornecidas estratégias para melhorar os resultados obtidos.

Geological structure and acoustic properties of sediments in Effingham Inlet

Thesis written for Oceanography 445

QUANTIFICATION AND EXTRACTION OF SURFACE FEATURES FROM DIGITAL TERRAIN MODELS

Digital Terrain Models (DTMs) are important in geology and geomorphology, since elevation data contains a lot of information pertaining to geomorphological processes that influence the topography. The first derivative of topography is attitude; the second is curvature. GIS tools were developed for derivation of strike, dip, curvature and curvature orientation from Digital Elevation Models (DEMs). A method for displaying both strike and dip simultaneously as colour-coded visualization (AVA) was implemented. A plug-in for calculating strike and dip via Least Squares Regression was created first using VB.NET. Further research produced a more computationally efficient solution, convolution filtering, which was implemented as Python scripts. These scripts were also used for calculation of curvature and curvature orientation. The application of these tools was demonstrated by performing morphometric studies on datasets from Earth and Mars. The tools show promise, however more work is needed to explore their full potential and possible uses.

Geochemical mapping of carbonate sediments in the Makgadikgadi basin, Botswana using moderate resolution remote sensing data

This paper maps the carbonate geochemistry of the Makgadikgadi Pans region of northern Botswana from moderate resolution (500 m pixels) remotely sensed data, to assess the impact of various geomorphological processes on surficial carbonate distribution. Previous palaeo-environmental studies have demonstrated that the pans have experienced several highstands during the Quaternary, forming calcretes around shoreline embayments. The pans are also a significant regional source of dust, and some workers have suggested that surficial carbonate distributions may be controlled, in part, by wind regime. Field studies of carbonate deposits in the region have also highlighted the importance of fluvial and groundwater processes in calcrete formation. However, due to the large area involved and problems of accessibility, the carbonate distribution across the entire Makgadikgadi basin remains poorly understood. The MODIS instrument permits mapping of carbonate distribution over large areas; comparison with estimates from Landsat Thematic Mapper data show reasonable agreement, and there is good agreement with estimates from laboratory analysis of field samples. The results suggest that palaeo-lake highstands, reconstructed here using the SRTM 3 arc-second digital elevation model, have left behind surficial carbonate deposits, which can be mapped by the MODIS instrument. Copyright (c) 2006 John Wiley & Sons, Ltd.

Geochemical mapping of carbonate sediments in the Makgadikgadi basin, Botswana using moderate resolution remote sensing data

This paper maps the carbonate geochemistry of the Makgadikgadi Pans region of northern Botswana from moderate resolution (500 m pixels) remotely sensed data, to assess the impact of various geomorphological processes on surficial carbonate distribution. Previous palaeo-environmental studies have demonstrated that the pans have experienced several highstands during the Quaternary, forming calcretes around shoreline embayments. The pans are also a significant regional source of dust, and some workers have suggested that surficial carbonate distributions may be controlled, in part, by wind regime. Field studies of carbonate deposits in the region have also highlighted the importance of fluvial and groundwater processes in calcrete formation. However, due to the large area involved and problems of accessibility, the carbonate distribution across the entire Makgadikgadi basin remains poorly understood. The MODIS instrument permits mapping of carbonate distribution over large areas; comparison with estimates from Landsat Thematic Mapper data show reasonable agreement, and there is good agreement with estimates from laboratory analysis of field samples. The results suggest that palaeo-lake highstands, reconstructed here using the SRTM 3 arc-second digital elevation model, have left behind surficial carbonate deposits, which can be mapped by the MODIS instrument. Copyright (c) 2006 John Wiley & Sons, Ltd.

A rate and state friction law for saline ice

Sea ice friction models are necessary to predict the nature of interactions between sea ice floes. These interactions are of interest on a range of scales, for example, to predict loads on engineering structures in icy waters or to understand the basin-scale motion of sea ice. Many models use Amonton's friction law due to its simplicity. More advanced models allow for hydrodynamic lubrication and refreezing of asperities; however, modeling these processes leads to greatly increased complexity. In this paper we propose, by analogy with rock physics, that a rate- and state-dependent friction law allows us to incorporate memory (and thus the effects of lubrication and bonding) into ice friction models without a great increase in complexity. We support this proposal with experimental data on both the laboratory (∼0.1 m) and ice tank (∼1 m) scale. These experiments show that the effects of static contact under normal load can be incorporated into a friction model. We find the parameters for a first-order rate and state model to be A = 0.310, B = 0.382, and μ0 = 0.872. Such a model then allows us to make predictions about the nature of memory effects in moving ice-ice contacts.