Effect of structures of modifiers on electrochemistry of di-mu-oxo dimanganese 2,2'-bipyridine complex

The gold electrodes modified with 2-picolinic acid , nicotinic acid, iso-nicotinic or thiophene were prepared using membrane transfer method, The electrochemistry of di-mu-oxodimanganese 2,2'-bipyridine complex was studied in the acetic acid buffer solution at different modified gold electrodes, It was found that the modifiers which can promote the electrochemical reaction of the complex should be of at least two functional groups, One group can be bound to the electrode surface and the other can form electron transfer pathway between the modifier and the complex through sal; bridge or hydrogen bond, In addition, the mechanism of the electrochemical reaction was discussed.

CHEMICAL-IONIZATION MASS-SPECTROMETRY OF SOME NITRO-CONTAINING BIFUNCTIONAL AROMATIC-COMPOUNDS - LOCATION OF PROTONATION SITE

It is found that the nitro substituent of some aromatic bifunctional compounds shows unusual reactivity towards protonation. In the chemical ionization mass spectra of nitrobenzoic acids and their esters and amides, and of nitrophenols and their ethers, protonations on the carboxyl, ester, amide, hydroxyl or alkoxyl groups are highly suppressed by that on the nitro group. As a result, fragmentations based on protonation on these groups unexpectedly become negligible. Ortho effects were observed for all the ortho isomers where the initial protonation on the nitro group is followed by an intramolecular proton transfer reaction, which leads to the expected 'normal' fragmentations. Protonation on the nitro substituent is much more favourable in energy than on any of the other substituents. The interaction of the two substituents through the conjugating benzene ring is found to be responsible for this 'unfair' competitive protonation. The electron-attracting nitro group strongly destabilizes the MH+ ions formed through protonation on the other substituent; although the COR (R = OH, OMe, OEt, NH2) groups are also electron-withdrawing, their effects are weaker than that of NO2; thus protonation on the latter group produces more-stable MH+ ions. On the other hand, an electron-releasing group OR (R = H, Me, Et) stabilizes the nitro-protonated species; the stronger the electron-donating effect of this group the more stable the nitro-protonated ions.

REEVALUATION OF 2,2-BIPYRIDINE AND PYRAZINE AS PROMOTERS FOR DIRECT ELECTRON-TRANSFER BETWEEN CYTOCHROME-C AND METAL-ELECTRODES

Results from previous electrochemical studies have indicated that 2,2'-bipyridine and pyrazine do not function as promoters for heterogeneous electron transfer between cytochrome c and metal electrodes. Their lack of activity was attributed to the improper positioning of the two functional groups in 2,2'-bipyridine and the inefficient length of pyrazine. In the present study it was determined that both 2,2'-bipyridine and pyrazine act as promoters when self-absorbed over a sufficiently long dipping time or at roughened electrodes. The promoter characteristics of these two molecules were studied and compared with those of 4,4'-bipyridine. The difference in their promoter behavior appears to result primarily from their different strengths of adsorption and not because electrodes modified with 2,2'-bipyridine or pyrazine are unsuitable for accelerating direct electron transfer reactions in cytochrome c. These results have implications regarding the mechanism(s) of promoter effects in electrochemical reactions of cytochrome c.

ELECTROCATALYSIS ON ELECTROCHEMICALLY PRETREATED GLASSY-CARBON ELECTRODE

The surface structure of glassy carbon electrode subjected to "galvanostat" pretreat- ment and its electrocatalytic behaviour in the presence of ascorbic acid, catechol and hydroquinone were studied by means of cyclic voltammetry, chronoamperometry, chronocoulometry and scanning electron microscopy. The electrocatalytic mechanism was discussed, which was due to the adsorption and the catalysis of functional groups at the electrode surface. Three separated peaks from the mixture of catecnol, hydroq...

Screening of genes expressed in vivo after infection by Vibrio anguillarum M3

Aims: Genes uniquely expressed in vivo may contribute to the overall pathogenicity of an organism and are likely to serve as potential targets for the development of new vaccine. This study aims to screen the genes expressed in vivo after Vibrio anguillarum infection by in vivo-induced antigen technology (IVIAT). Methods and Results: The convalescent-phase sera were obtained from turbot (Scophthalmus maximus) survived after infection by the virulent V. anguillarum M3. The pooled sera were thoroughly adsorbed with M3 cells and Escherichia coli BL21 (DE3) cells. A genomic expression library of M3 was constructed and screened for the identification of immunogenic proteins by colony immunoblot analysis with the adsorbed sera. After three rounds of screening, 19 putative in vivo-induced (ivi) genes were obtained. These ivi genes were catalogued into four functional groups: regulator/signalling, metabolism, biological process and hypothetical proteins. Three ivi genes were insertion-mutated, and the growth and 50% lethal dose (LD50) of these mutants were evaluated. Conclusions: The identification of ivi genes in V. anguillarum M3 sheds light on understanding the bacterial pathogenesis and provides novel targets for the development of new vaccines and diagnostic reagents. Significance and Impact of the Study: To the best of our knowledge, this is the first report describing in vivo-expressed genes of V. anguillarum using IVIAT. The screened ivi genes in this study could be new virulent factors and targets for the development of vaccine, which may have implications for the development of diagnostic regents.

Screening of genes expressed in vivo after infection by Vibrio anguillarum M3

Aims: Genes uniquely expressed in vivo may contribute to the overall pathogenicity of an organism and are likely to serve as potential targets for the development of new vaccine. This study aims to screen the genes expressed in vivo after Vibrio anguillarum infection by in vivo-induced antigen technology (IVIAT). Methods and Results: The convalescent-phase sera were obtained from turbot (Scophthalmus maximus) survived after infection by the virulent V. anguillarum M3. The pooled sera were thoroughly adsorbed with M3 cells and Escherichia coli BL21 (DE3) cells. A genomic expression library of M3 was constructed and screened for the identification of immunogenic proteins by colony immunoblot analysis with the adsorbed sera. After three rounds of screening, 19 putative in vivo-induced (ivi) genes were obtained. These ivi genes were catalogued into four functional groups: regulator/signalling, metabolism, biological process and hypothetical proteins. Three ivi genes were insertion-mutated, and the growth and 50% lethal dose (LD50) of these mutants were evaluated. Conclusions: The identification of ivi genes in V. anguillarum M3 sheds light on understanding the bacterial pathogenesis and provides novel targets for the development of new vaccines and diagnostic reagents. Significance and Impact of the Study: To the best of our knowledge, this is the first report describing in vivo-expressed genes of V. anguillarum using IVIAT. The screened ivi genes in this study could be new virulent factors and targets for the development of vaccine, which may have implications for the development of diagnostic regents.

The encysted dormant embryo proteome of Artemia sinica

The possibility of the brine shrimp Artemia to produce dormant embryo (cysts) in diapause is a key feature in its life history. In the present study, we obtained a proteomic reference map for the diapause embryo of Artemia sinica using two-dimensional gel electrophoresis with a pH range of 4-7 and a molecular weight range of 10-100 kDa. Approximately 233 proteins were detected, and 60 of them were analyzed by capillary liquid chromatography tandem mass spectrometry (LC-MS/MS). Of these, 39 spots representing 33 unique proteins were identified, which are categorized into functional groups, including cell defense, cell structure, metabolism, protein synthesis, proteolysis, and other processes. This reference map will contribute toward understanding the state of the diapause embryo and lay the basis and serve as a useful tool for further profound studies in the proteomics of Artemia at different developmental stages and physiological conditions.

黄海浮游动物功能群的研究

浮游动物在海洋生态系统物质循环和能量流动中起着至关重要的作用。浮游动物物种组成、生物量和次级生产力的变化会改变生态系统的结构和功能。在黄海生态系统中如何描述这个过程，并使它易于模拟是本论文的研究目的。生物量和生产力是海洋生态系统食物网的基础。谁是浮游动物生物量和次级生产力的基础？哪些种类在生态系统中起关键作用？这些问题在黄海这样的温带陆架边缘海区很难回答，原因是物种组成、生物量和生产力的季节变化显著。因此，在对黄海食物产出的关键过程进行模拟时，需要应用既准确又简便的方法来对浮游动物群落的生态过程进行模拟。在对黄海浮游动物群落结构和物理海洋学特征进行充分的分析之后，浮游动物功能群的方法被确定用来进行黄海生态系统结构和功能的模拟。 根据浮游动物的粒径、摄食习性和营养功能，黄海浮游动物被分为6个功能群：大型浮游甲壳动物功能群（Giant crustacean，GC）、大型桡足类功能群（Large copepods, LC）、小型桡足类功能群（Small copepods，SC）、毛颚类功能群（Chaetognaths）、水母类功能群（Medusae）和海樽类功能群（Salps）。GC、LC和SC是按照粒径大小而划分的功能群，他们是高营养层次的主要食物资源。毛颚类和水母类是两类胶质性的肉食性浮游动物功能群，他们与高营养层次竞争摄食饵料浮游动物；海樽类与其他浮游动物种类竞争摄食浮游植物，而本身的物质和能量却不能有效的传递到高营养层次。本文研究报道了浮游动物各功能群的时空分布、基于浮游动物动能群的黄海生态区划分、饵料浮游动物功能群的生产力、毛颚类对浮游动物的摄食压力以及中华哲水蚤（Calanus sinicus）的摄食生态学。 春季，浮游动物生物量为2.1 g m–2，GC、LC和SC对生物量的贡献率分别为19, 44 和 26%。高生物量的LC和SC功能群主要分布于山东半岛南岸的近岸海域，而GC主要分布在远岸站位。夏季，浮游动物的生物量为3.1 g m–2，GC贡献了73%。GC、LC和SC主要分布在黄海的中部海域。秋季，浮游动物生物量为1.8 g m–2，GC、LC和SC的贡献率相似，分别为36, 33和23%，高生物量的GC和LC分布在黄海中部，而SC主要分布在远岸站位。GC和LC是冬季浮游动物生物量（2.9 g m–2）的优势功能群，分别贡献率了57%和27%，高生物量的GC、LC和SC都分布在黄海的中部海域。与GC、LC和SC相比，毛颚类生物量较低，主要分布于黄海的中北部海域。水母类（本文中指小型水母类）和海樽类斑块分布明显，主要分布于黄海沿岸和北部海域。属于不同功能群的约10个种类为浮游动物的优势种，控制着浮游动物群落的动态。 春季，黄海可以被分成4个浮游动物生态区，浮游动物生物量的分布中心位于山东半岛南岸近岸海域，与第一个生态区相对应，LC和SC在分布中心起主要的控制作用；夏、秋和冬季，黄海分别被分成3、4和3个生态区，浮游动物生物量的分布中心均位于黄海的中部海域，均与各季节的第一个生态区相对应，GC和LC是分布中心生态区的优势功能群，对分布中心起主要的控制作用。黄海冷水团（YSCBW）在GC、LC和SC的空间分布模式中起着重要的作用。黄海不同季节浮游动物生态区的空间分布模式及生态区中起控制作用的优势功能群类别有着重要的生态学意义。 我们将饵料浮游动物功能群细化为0.16–0.25 mm、0.25–0.5 mm、0.5–1 mm、1–2 mm和 >2 mm5个粒径组。应用生物能量学的方法研究了不同粒径浮游动物的生产力。结果表明：浮游动物次级生产力5月份最高，为91.9 mg C m–2 d–1，其次是6月和9月，分别为75.6 mg C m–2 d–1和65.5 mg C m–2 d–1，8月、3月和12月较低，仅为42.3 mg C m–2 d–1、35.9 mg C m–2 d–1和27.9 mg C m–2 d–1。根据这些结果，黄海浮游动物年次级生产力为18.9 g C m–2 year–1。0.16–0.25 mm和 0.25–0.5 mm 两个粒径组对浮游动物次级生产力的贡献率为58–79%，即相对应的SC功能群的周转率（P/B, 0.091–0.193 d–1）要高于GC和LC。 黄海毛颚类功能群的优势种类为强壮箭虫（Sagitta crassa）、纳嘎箭虫（S. nagae）、肥胖箭虫（S. enflata）和百陶箭虫（S. bedoti）。我们对这四种箭虫的生产力和对浮游动物生物量和生产力的摄食压力进行了研究。结果表明：黄海毛颚类总的生物量为98–217 mg m–2，总的生产力为1.22–2.36 mg C m–2 d–1。黄海毛颚类的生物量占浮游动物总生物量的6.35–14.47%，而生产力仅占浮游动物总生产力的2.54–6.04%。强壮箭虫和纳嘎箭虫是黄海毛颚类功能群的绝对优势种，控制着黄海毛颚类群落的动态。黄海毛颚类总的摄食率为4.24–8.18 mg C m–2d–1，对浮游动物现存量和生产力总的摄食压力分别为为0.94%和12.56%。黄海冬季，浮游动物的现存量和生产力为0.4 g C m–2和0.026 g C m–2d–1，而毛颚类的摄食压力却达到了全年的最大值，为1.4%和20.94%。因此，毛颚类的摄食可能对冬季浮游动物群落结构造成重要的影响。通过不同体长组箭虫的摄食率可以推断，黄海毛颚类全年主要摄食小型桡足类，对SC功能群的摄食压力最大。但是在夏季黄海冷水团形成的月份，毛颚类对前体长为2 mm的LC功能群中的种类摄食压力也较大，但此时，由于优势种中华哲水蚤进入滞育阶段，因此毛颚类的摄食会对其种群数量造成严重的影响。 中华哲水蚤在春、秋季的摄食率分别为2.08–11.46和0.26–3.70 µg C female–1 day–1，与微型浮游生物的现存量呈显著的正相关。春季，在黄海的北部，中华哲水蚤通过摄食微型浮游生物吸收的碳量能够满足其代谢和繁殖需求，而在黄海的南部和秋季黄海冷水团锋区附近，中华哲水蚤必须通过摄食其他类型的食物资源来维持其代谢和生殖需求。较低的摄食率、无产卵以及种群中CV期桡足幼体占优势表明，秋季中华哲水蚤在黄海冷水团区域内处于滞育状态。中华哲水蚤优先摄食微型原生动物，并且春季中华哲水蚤总的生长效率（GGE, 3–39%）与食物中微型原生动物的比例呈显著的正相关，表明微型原生动物具有较高的营养价值。但是，因较低的产卵率（0.16–12.6 eggs female–1 day–1）而导致的中华哲水蚤较低的总生长效率（13.4%），可能就是由于其食物中的必需营养成分含量不足（或缺乏）造成的。 本文从生物量的角度，对黄海浮游动物各功能群的时空分布、生态区划分进行了研究报道，对GC、LC和SC功能群的生产力、毛颚类对浮游动物的摄食压力和中华哲水蚤的摄食生态学进行了较为深入的研究，这些结果为黄海食物产出的关键过程的模拟提供了基础资料。今后的研究重点应搞清楚黄海水母类对浮游动物次级生产力的摄食压力和海樽类在食物产出模型中产生的负效应的程度，浮游动物各功能群的组成、季节变化和空间分布模式的长期变化，尤其是在气候变化和人类活动的影响下，将是今后研究的重点。

Ammonia synthesis over Ru/C catalysts with different carbon supports promoted by barium and potassium compounds

Ammonia synthesis over ruthenium catalysts supported on different carbon materials using Ba or K compounds as promoters has been investigated. Ba(NO3)(2), KOH, and KNO3 are used as the promoter or promoter precursor, and activated carbon (AC), activated carbon fiber (ACF). and carbon molecular sieve (CMS) are used as the support. The activity measurement for ammonia synthesis was carried out in a flow micro-reactor under mild conditions: 350-450 degreesC and 3.0 MPa. Results show that KOH promoter was more effective than KNO3. and that Ba(NO3)(2) was the most effective promoter among the three. The roles of promoters can be divided into the electronic modification of ruthenium, the neutralization of surface functional groups on the carbon support and the ruthenium precursor. The catalyst with AC as the support gave the highest ammonia concentration in the effluent among the supports used, while the catalyst with ACF as the support showed the highest turnover-frequency (TOF) value. It seems that the larger particles of Ru on the carbon supports are more active for ammonia synthesis in terms of TOF value. (C) 2001 Elsevier Science B.V. All rights reserved.

Nickel-promoted ligand-free palladium-catalyzed Suzuki coupling reaction

A Ni-promoted ligand-free palladium catalyst system for Suzuki coupling of aryl bromides has been developed in high efficiency under mild reaction conditions. It was obtained in situ by introducing NiCl2 to PdCl2/PVP using a parallel high-throughput screening technique. A wide range of aryl bromides bearing a variety of functional groups was evaluated.

Synteza i struktura nowych aminowych analogów ansamycynowego antybiotyku rifampicyny

Wydział Chemii: Zakład Biochemii

Badanie reaktywności wybranych nienasyconych pochodnych β-diketonów i anilin w obecności alkilidenowych kompleksów rutenu typu Grubbsa

Wydział Chemii: Zakład Chemii Metaloorganicznej

Rentgenowska analiza strukturalna roztworów pochodnych anizolu i toluenu w 1,4-dimetylobenzenie

Wydział Fizyki: Zakład Optyki

The synthesis and biological evaluation of lanostane and cholestane-type natural products

The main objective of this thesis is to outline the synthetic chemistry involved in the preparation of a range of novel lanostane and cholestane derivatives, and subsequent investigation into their biological activity in cancer cells. The biological results obtained throughout the project have driven the strategic synthesis of new compounds, in an effort to optimise the anti cancer potential of lanostane and cholestane derivatives. The first chapter begins with an overview of steroidal compounds and details a literature review of the natural sources of these moieties, as well as their biosynthesis and reported synthetic derivatives. The biological activity of interesting natural and synthetic analogues is also discussed. In addition, an insight into some currently prescribed pharmaceutical compounds, with functional groups relevant to this project, is presented. The second chapter discusses the methods employed for the synthesis of these novel lanostane and cholestane derivatives, and comprises three main sections. Firstly, various oxidation products of lanosterol are synthesised, mainly via epoxidations of the C-8,9 and C- 24,25 alkenes, and also allylic oxidations at these positions. Secondly, amine derivatives of lanosterol are formed by cleaving the lanostane side chain, thereby yielding a new cholestane nucleus, and performing several reductive aminations on the resulting key aldehyde intermediates. Various amines such as piperidine, morpholine, diethylamine and aniline are employed in the reductive amination reactions to yield novel cholestane steroids with amine side chains. Finally, starting from stigmasterol and proceeding with the same methodology of cleaving the steroidal side chain and subsequently performing reductive aminations, novel cholestane derivatives of the biologically active amines are synthesised. The cytotoxicity of these compounds against CaCo-2 and U937 cell lines is presented in terms of percentage viability of cells, IC50 value and apoptosis. The MTT assay is used to determine the percentage viability of cells, and the IC50 data is generated from the MTT results. Apoptosis is measured in terms of fold increase relative to a carrier control. In summary, the compounds formed are discussed in terms of chemical synthesis, spectroscopic interpretation and biological activity. The main reaction pathways involved in the chemistry within this project are various oxidations and reductive amination. The final chapter is a detailed account of the full experimental procedures for the compounds synthesised during this work, including characterisation using spectroscopic and analytical data.

Synthesis, functionalisation and characterisation of germanium nanocrystals & their applications

In the last two decades, semiconductor nanocrystals have been the focus of intense research due to their size dependant optical and electrical properties. Much is now known about how to control their size, shape, composition and surface chemistry, allowing fine control of their photophysical and electronic properties. However, genuine concerns have been raised regarding the heavy metal content of these materials, which is toxic even at relatively low concentrations and may limit their wide scale use. These concerns have driven the development of heavy metal free alternatives. In recent years, germanium nanocrystals (Ge NCs) have emerged as environmentally friendlier alternatives to II-VI and IV-VI semiconductor materials as they are nontoxic, biocompatible and electrochemically stable. This thesis reports the synthesis and characterisation of Ge NCs and their application as fluorescence probes for the detection of metal ions. A room-temperature method for the synthesis of size monodisperse Ge NCs within inverse micelles is reported, with well-defined core diameters that may be tuned from 3.5 to 4.5 nm. The Ge NCs are chemically passivated with amine ligands, minimising surface oxidation while rendering the NCs dispersible in a range of polar solvents. Regulation of the Ge NCs size is achieved by variation of the ammonium salts used to form the micelles. A maximum quantum yield of 20% is shown for the nanocrystals, and a transition from primarily blue to green emission is observed as the NC diameter increases from 3.5 to 4.5 nm. A polydisperse sample with a mixed emission profile is prepared and separated by centrifugation into individual sized NCs which each showed blue and green emission only, with total suppression of other emission colours. A new, efficient one step synthesis of Ge NCs with in situ passivation and straightforward purification steps is also reported. Ge NCs are formed by co-reduction of a mixture of GeCl4 and n-butyltrichlorogermane; the latter is used both as a capping ligand and a germanium source. The surface-bound layer of butyl chains both chemically passivates and stabilises the Ge NCs. Optical spectroscopy confirmed that these NCs are in the strong quantum confinement regime, with significant involvement of surface species in exciton recombination processes. The PL QY is determined to be 37 %, one of the highest values reported for organically terminated Ge NCs. A synthetic method is developed to produce size monodisperse Ge NCs with modified surface chemistries bearing carboxylic acid, acetate, amine and epoxy functional groups. The effect of these different surface terminations on the optical properties of the NCs is also studied. Comparison of the emission properties of these Ge NCs showed that the wavelength position of the PL maxima could be moved from the UV to the blue/green by choice of the appropriate surface group. We also report the application of water-soluble Ge NCs as a fluorescent sensing platform for the fast, highly selective and sensitive detection of Fe3+ ions. The luminescence quenching mechanism is confirmed by lifetime and absorbance spectroscopies, while the applicability of this assay for detection of Fe3+ in real water samples is investigated and found to satisfy the US Environmental Protection Agency requirements for Fe3+ levels in drinkable water supplies.