First record of Ocinebrina nicolai (Mollusca: Gastropoda: Muricidae: Ocenebrinae) in North-Eastern Atlantic waters

Ocinebrina nicolai Monterosato, 1884 a marine mollusc belonging to the Muricidae family is reported from Algarve, south coast of Portugal for the first time and is a new record for the biodiversity of the Portuguese malacological fauna and northeastern Atlantic waters. This species with a medium-size shell for the genus (14–16 mm) was initially sampled during a baseline project that studied marine biotopes in the central Algarve region. This short note presents a brief diagnosis of the species, provides local information on geographical distribution, habitat, and compares it with other congeneric species found in Portugal: Ocinebrina aciculata (Lamarck, 1822) and Ocinebrina edwardsii (Payraudeau, 1826).

The efficacy of releasing caught Nephrops as a management measure

The objective of this work was to examine if a policy of releasing caught lobsters, Nephrops, could be used to protect the Nephrops population off the south coast of Portugal. Such a measure, as an alternative to closing the fishery completely, would allow the continued operation of the fleet in targeting other species, resulting in a reduced economic and social impact compared with a complete closure. For such a proposal to be considered, information on survival rates of released lobsters is required. Nephrops were sampled randomly from the catch of commercial trawlers and put in cages, in an area with similar conditions to the area where they were caught, in order to evaluate survival rates. The cages were immersed for periods of 5–9 days. Several factors were considered to potentially affect survival, including duration of the tow and season, and biological characteristics of the individuals (e.g. size, sex and ovigerous condition). Survival was only affected by season (increased mortality inwarm months).Aglobal estimate of survival of released lobsters, taking into consideration survival and proportion of the catches for each season, was 35%. Simulation models were used to investigate the potential effect of a release measure on the population. Assuming the number of recaptured individuals is negligible, Z (instantaneous total mortality rate)would be considerably reduced if a release policy was implemented. This is particularly important if the levels of exploitation are high, which seems to be the case in this stock. It is our belief that the implementation of amanagement measure of returning all caught lobsters to the sea is worth considering as a means of aiding recovery of the resource. This measure would have the side effect of discouraging the choice of Nephrops as a target species, potentially reducing the fishing mortality even more significantly.

Combining sampling, profiling, remote sensing and modelling to efficiently monitoring estuarine and coastal water quality

Monitoring of coastal and estuarine water quality has been traditionally performed by sampling with subsequent laboratory analysis. This has the disadvantages of low spatial and temporal resolution and high cost. In the last decades two alternative techniques have emerged to overcome this drawback: profiling and remote sensing. Profiling using multi-parameter sensors is now in a commercial stage. It can be used, tied to a boat, to obtain a quick “picture” of the system. The spatial resolution thus increases from single points to a line coincident with the boat track. The temporal resolution however remains unchanged since campaigns and resources involved are basically the same. The need for laboratory analysis was reduced but not eliminated because parameters like nutrients, microbiology or metals are still difficult to obtain with sensors and validation measurements are still needed. In the last years the improvement in satellite resolution has enabled its use for coastal and estuarine water monitoring. Although spatial coverage and resolution of satellite images in the present is already suitable to coastal and estuarine monitoring, temporal resolution is naturally limited to satellite passages and cloud cover. With this panorama the best approach to water monitoring is to integrate and combine data from all these sources. The natural tools to perform this integration are numerical models. Models benefit from the different sources of data to obtain a better calibration. After calibration they can be used to extend spatially and temporally the methods resolution. In Algarve (South of Portugal) a monitoring effort using this approach is being undertaken. The monitoring effort comprises five different locations including coastal waters, estuaries and coastal lagoons. The objective is to establish the base line situation to evaluate the impact of Waste Water Treatment Plants design and retrofitting. The field campaigns include monthly synoptic profiling, using an YSI 6600 multi-parameter system, laboratory analysis and fixed stations. The remote sensing uses ENVISAT\MERIS Level 2 Full Resolution data. This data is combined and used with the MOHID modelling system to obtain an integrate description of the systems. The results show the limitations of each method and the ability of the modelling system to integrate the results and to produce a comprehensive picture of the system.

The fishery for Norway lobster off the portuguese coast: a biological and economic assessment

Dissertação de mest., Aquacultura e Pescas, Faculdade de Ciências do Mar e Ambiente, Universidade do Algarve, 2009

A neural network seismic detector

This experimental study focuses on a detection system at the seismic station level that should have a similar role to the detection algorithms based on the ratio STA/LTA. We tested two types of neural network: Multi-Layer Perceptrons and Support Vector Machines, trained in supervised mode. The universe of data consisted of 2903 patterns extracted from records of the PVAQ station, of the seismography network of the Institute of Meteorology of Portugal. The spectral characteristics of the records and its variation in time were reflected in the input patterns, consisting in a set of values of power spectral density in selected frequencies, extracted from a spectro gram calculated over a segment of record of pre-determined duration. The universe of data was divided, with about 60% for the training and the remainder reserved for testing and validation. To ensure that all patterns in the universe of data were within the range of variation of the training set, we used an algorithm to separate the universe of data by hyper-convex polyhedrons, determining in this manner a set of patterns that have a mandatory part of the training set. Additionally, an active learning strategy was conducted, by iteratively incorporating poorly classified cases in the training set. The best results, in terms of sensitivity and selectivity in the whole data ranged between 98% and 100%. These results compare very favorably with the ones obtained by the existing detection system, 50%.

A greenhouse climate multivariable predictive controller

A multivariable predictive controller was implemented to regulate the air temperature, humidity and CO2 concentration for a greenhouse located in the north of Portugal. The controller outputs are computed in order to optimise the future behaviour of the greenhouse environment, concerning the set-point accuracy and the minimization of energy inputs.

Computational intelligence

The Centre for Intelligent Systems (CIS) is a multidisciplinary research and development centre, founded in 2001, in a very young university, the University of Algarve, in the south of Portugal. The centr's mission is to promote fundamental research in Computational Intelligence (CI) methodology.

Macrofauna spatial differences within clam dredge-tracks and their implications for short-term fishing effect studies

In situ observations of clam dredging showed that the effects of the dredge on the benthic macrofauna may not be constant during a tow. A sand buffer forms in front of the gear approximately 10m after the beginning of a tow, and this pushes the sediment partially aside.In this study, we analyse differences in abundance, the number of taxa present, diversity, and evenness within sections of dredge-tracks in a disturbed, fished area and a non-fished area along the southern coast of Portugal. These areas were sampled by divers before and after dredge-fishing activity. At each site, three dredge-tracks were produced. These tracks were divided in three longitudinal sections 1start, middle and end) and two transverse sections 1track and edge). Six quadrats were used to sample macrofauna in each section of every track and edge. Our results show differences exist in macro- faunal distribution and abundance across sections of a dredge-track. These differences should be considered in any assessment of the short-term ecological impact of dredges on benthic macrofauna

Pomegranate liquor preparation and analysis

The pomegranate (Punica granatum L.) liquor has been produced for several centuries in the south of Portugal, mainly in the mountain areas. The “Assaria” variety is the preferred cultivar due to its organoleptic properties and high arils to peel ratio. Wild pomegranates are also widely distributed but, despite the health benefits that have been associated to the fruits, they continue to be unappreciated for consumption. Liquor preparation is a very good alternative for wild pomegranate fruits. We prepared pomegranate liquors by following a maceration procedure using the arils or juice of Assaria and wild pomegranate fruits. Strawberry tree (Arbutus unedo L.) fruit spirits were used to prepare the liquors. At the end of the maceration time 5 day as minimum sugar syrup was added. The maturation period was three months or longer. The obtained liquors showed a very attractive pink colour. The colour and the total polyphenol, as well as the anthocyanin and ellagitannin profiles, were measured at the end of the maceration and maturation times. Wild pomegranates gave rise liquors with more intense pink colour and higher polyphenol contents than the prepared using Assaria fruits. The anthocyanin and ellagitannin profiles also indicated higher contents of polyphenols for liquors prepared using wild pomegranate fruits. When juice is used instead of complete arils during the maceration period punicalin is not present and the consequently total polyphenols is low. The main anthocyanins identified in the liquors were delphinidin-3,5-diglucoside, cyaniding-3,5-diglucoside, delphinidin–3-glucoside, cyaniding–3-glucoside, pelargonidin–3–glucoside; the main ellagitannins were punicalagin and punicalin.

Guest reputation indexes to analyze hotel’s online reputation using data extracted from OTAs

Nowadays many travelers use online travel agency (OTAs) to book flights, hotel rooms, rent-a-cars, cruises or entire vacation packages. Usually OTAs allow their users to give scores and to write reviews about what was used. Each OTA defines the terms and conditions for guest rating or review score and hoteliers are giving increasing importance to the scores and reviews their guests do in OTAs. This paper proposes two guest reputation index to help hoteliers to monitorize their presence in OTAs. The Aggregated Guest Reputation Index (AGRI), which shows the positioning of a hotel in different OTAs and it is calculated from the scores obtained by the hotels in those OTAs. Another one, the Semantic Guest Reputation Index (SGRI), which incorporates the social reputation of a hotel and that can be visualized through the development of word clouds or tag clouds. Examples of usage of these indexes are given with data extracted from 5-stars hotels in the Algarve, south region of Portugal, that are available on Booking and Expedia.

Generate disaggregated soil allocation data using a Minimum Cross Entropy Model

Montado ecosystem in the Alentejo Region, south of Portugal, has enormous agro-ecological and economics heterogeneities. A definition of homogeneous sub-units among this heterogeneous ecosystem was made, but for them is disposal only partial statistical information about soil allocation agro-forestry activities. The paper proposal is to recover the unknown soil allocation at each homogeneous sub-unit, disaggregating a complete data set for the Montado ecosystem area using incomplete information at sub-units level. The methodological framework is based on a Generalized Maximum Entropy approach, which is developed in thee steps concerning the specification of a r order Markov process, the estimates of aggregate transition probabilities and the disaggregation data to recover the unknown soil allocation at each homogeneous sub-units. The results quality is evaluated using the predicted absolute deviation (PAD) and the "Disagegation Information Gain" (DIG) and shows very acceptable estimation errors.

DNA extraction and RAPD markers to assess the genetic similarity among Gelidium sesquipedale (Rhodophyta) populations

A simple method developed for genomic DNA isolation from fungus was tested on the red alga, Gelidium sesquipedale (Clem.) Born et Thur., which is commercially exploited for its high sulfated polysaccharide (agar) content. This method is faster, cheaper, and less toxic than conventional phenol/chloroform methods. Random amplified polymorphic DNA (RAPD) amplifications were performed successfully without the necessity of purifying the DNA. RAPD markers were used to investigate the genetic similarity among three natural populations of G. sesquipedale from southern Portugal. Bulked-genomic DNA samples of 15 different individuals were made in each population. These can be conceived of as a sample of the population DNA. Of the 62 primers screened, 41 produced bands and 22 revealed polymorphisms. Genetic similarities among populations were high. Populations that are further away from each other have the lowest similarity coefficients, whereas the intermediate Ingrina population, located on the south coast, showed higher genetic similarity with the Odeceixe population located on the southwest coast, than with the Sao Rafael southern population. This suggests a higher genetic flow between Odeceixe and Ingrina or the result may be a founder effect in the sense that the species has propagated from the east coast to the south coast of Portugal. We conclude that the use of this isolation method with RAPD analysis is appropriate to characterize the genetic variability of this commercial species along its geographical distribution. Large sample sizes can be screened at a relatively low cost. Finding genetic markers for commercial populations of C. sesquipedale may be of industrial interest.

Algarve – relação enogastronómica

Dissertação de Mestrado, Direção e Gestão Hoteleira, Escola Superior de Gestão, Hotelaria e Turismo, Universidade do Algarve, 2015

Tafonomia e paleoicnologia do neogénico superior do sector Cacela-Huelva (SE da Ibéria)

Tese de doutoramento em Paleontologia. Faculdade de Ciências do Mar e do Ambiente, Univ. do Algarve, 2005

Determinantes financeiros da estrutura de capital das PME industriais portuguesas ao longo dos ciclos económicos

Dissertação de Mestrado em Gestão Empresarial. Faculdade de Economia, Univ. do Algarve, 2004