Published work on freshwater science from the FBA, IFE and CEH, 1929-2006

A new listing of published scientific contributions from the Freshwater Biological Association (FBA) and its later Research Council associates – the Institute of Freshwater Ecology (1989–2000) and the Centre for Ecology and Hydrology (2000+) is provided. The period 1929–2006 is covered. The compilation extends an earlier list assembled by in 1979.

Qualitative and quantitative aspects of the food of Ethmalosa fimbriata (Bowdich) in the Ebrié lagoon (Côte d'Ivoire)

The food of Ethmalosa fimbriata in the central part of the Ebrié lagoon, where the salinity is low, consists on limnic phytoplankton. In the region near Abidjan, which is more strongly influenced by coastal water, it consists of marine phyto- and zooplankton. The daily ration of a 12.5 cm fork-length fish is estimated to be between 2 and 3 % of its body weight.

Geographical and morphological variation within and between colour phases inCoris julis(L. 1758), a protogynous marine fish

The possible differences between sexes in patterns of morphological variation in geographical space have been explored only in gonochorist freshwater species. We explored patterns of body shape variation in geographical space in a marine sequential hermaphrodite species, Coris julis (L. 1758), analyzing variation both within and between colour phases, through the use of geometric morphometrics and spatially-explicit statistical analyses. We also tested for the association of body shape with two environmental variables: temperature and chlorophyll a concentration, as obtained from time-series of satellite-derived data. Both colour phases showed a significant morphological variation in geographical space and patterns of variation divergent between phases. Although the morphological variation was qualitatively similar, individuals in the initial colour phase showed a more marked variation than individuals in the terminal phase. Body shape showed a weak but significant correlation with environmental variables, which was more pronounced in primary specimens.

Traditional and geometric morphometrics detect morphological variation of lower pharyngeal jaw inCoris julis(Teleostei, Labridae)

In the present study, variation in the morphology of the lower pharyngeal element between two Sicilian populations of the rainbow wrasse Coris julis has been explored by the means of traditional morphometrics for size and geometric morphometrics for shape. Despite close geographical distance and probable high genetic flow between the populations, statistically significant differences have been found both for size and shape. In fact, one population shows a larger lower pharyngeal element that has a larger central tooth. Compared to the other population, this population also has medially enlarged lower pharyngeal jaws with a more pronounced convexity of the medial-posterior margin. The results are discussed in the light of a possible more pronounced durophagy of this population.

Reproductive biology of Black Anglerfish (Lophius budegassa) in the northwestern Mediterranean Sea

Gonadal morphology and reproductive biology of the Black Anglerfish (Lophius budegassa) were studied by examining 4410 specimens collected between June 2007 and December 2010 in the northwestern Mediterranean Sea. Ovaries and testes presented traits common among fishes of the order Lophiiformes. Spawning occurred between November and March. Size at first maturity (L50) was 33.4 cm in total length (TL) for males and 48.2 cm TL for females. Black Anglerfish is a total spawner with group-synchronous oocyte development and determinate fecundity. Fecundity values ranged from 87,569 to 398,986 oocytes, and mean potential fecundity was estimated at 78,929 (standard error of the mean [SE] 13,648) oocytes per kilogram of mature female. This study provides the first description of the presence of 2–3 eggs sharing the same chamber and a semicystic type of spermatogenesis for Black Anglerfish. This new information allows for a better understanding of Black Anglerfish reproduction—knowledge that will be useful for the assessment and management of this species.

Seascape ecology of coastal biogenic habitats: advances, gaps, and challenges

We review the progress made in the emerging field of coastal seascape ecology, i.e. the application of landscape ecology concepts and techniques to the coastal marine environment. Since the early 1990s, the landscape ecology approach has been applied in several coastal subtidal and intertidal biogenic habitats across a range of spatial scales. Emerging evidence indicates that animals in these seascapes respond to the structure of patches and patch mosaics in different ways and at different spatial scales, yet we still know very little about the ecological significance of these relationships and the consequences of change in seascape patterning for ecosystem functioning and overall biodiversity. Ecological interactions that occur within patches and among different types of patches (or seascapes) are likely to be critically important in maintaining primary and secondary production, trophic transfer, biodiversity, coastal protection, and supporting a wealth of ecosystem goods and services. We review faunal responses to patch and seascape structure, including effects of fragmentation on 5 focal habitats: seagrass meadows, salt marshes, coral reefs, mangrove forests, and oyster reefs. Extrapolating and generalizing spatial relationships between ecological patterns and processes across scales remains a significant challenge, and we show that there are major gaps in our understanding of these relationships. Filling these gaps will be crucial for managing and responding to an inevitably changing coastal environment. We show that critical ecological thresholds exist in the structural patterning of biogenic ecosystems that, when exceeded, cause abrupt shifts in the distribution and abundance of organisms. A better understanding of faunal–seascape relationships, including the identifications of threshold effects, is urgently needed to support the development of more effective and holistic management actions in restoration, site prioritization, and forecasting the impacts of environmental change.

Sex-specific growth and mortality, spawning season, and female maturation of the stripey bass (Lutjanus carponotatus) on the Great Barrrier Reef

Sex-specific demography and reproductive biology of stripey bass (Lutjanus carponotatus) (also known as Spanish flag snapper, FAO) were examined at the Palm and Lizard island groups, Great Barrier Reef (GBR).Total mortality rates were similar between the sexes. Males had larger L∞ at both island groups and Lizard Island group fish had larger overall L∞. Female:male sex ratios were 1.3 and 1.1 at the Palm and Lizard island groups, respectively. The former is statistically different from 1, but is unlikely significantly different in a biological sense. Females matured on average at 2 years of age and 190 mm fork length at both locations. Female gonadal lipid body indices peaked from August through October, preceding peak gonadosomatic indices in October, November, and December that were twice as great as in any other month. However, ovarian staging revealed 50% or more ovaries were ripe from September through February, suggesting a more protracted spawning season and highlighting the different interpretations that can arise between gonad weight and gonad staging methods. Gonadosomatic index increases slightly with body size and larger fish have a longer average spawning season, which suggests that larger fish produce greater relative reproductive output. Lizard Island group females had ovaries nearly twice as large as Palm Island group females at a given body size. However, it is unclear whether this reflects spatial differences akin to those observed in growth or effects of sampling Lizard Island group fish closer to their date of spawning. These results support an existing 250 mm minimum size limit for L. carponotatus on the GBR, as well as the timing of a proposed October through December spawning closure for the fishery. The results also caution against assessing reef-fish stocks without reference to sex-, size-, and location-specific biological traits.

Composition and distribution of benthos in Kali Estuary, Karwar

The composition and abundance of meio and macrobenthos in 5 stations of Kali estuary were studied during September 1981 to September 1982. In all sixteen meiobenthic and fourteen macrobenthic taxa were identified and the salient features in their temporal and spatial distribution, species dominance and percentage occurrence are discussed.

Temporal and spatial distribution of phytoplankton with emphasis on Skeletonema costatum in the Mathamuhuri river – estuary (Chakaria mangrove ecosystem), Bangladesh

A total of 91 species under 44 genera were identified among the phytoplankton community during the course of one year's investigation between May 1982 and April 1983. Bacillariophyta was the most dominant group with 72 specie, Chlorophyta 11 spp, Cyanophyta 6 spp and Pyrrophyta was represented by 2 species. The yearly percentage composition of 4 groups of phytoplankton in order of abundance were Bacillariophyta 50.77%, Cyanophyta 47.70%, Chlorophyta 1.5% and Pyrrophyta 0.02%. The highest densities of phytoplankton were recorded in monsoon months (June-July) with a peak in July (31550 cells/l) and the minimum in February (770 cells/1). Higher concentration of phytoplankton was recorded at station 2, nearer to the Chakaria Sundarbans (mangroves), but abundance of phytoplankton showed no significant difference in the two stations (Mann Whitney U test, P=0.64, Z=-0.642, U=64). Phytoplankton population in this area were positively correlated with rainfall (r=0.655, P=<0.5, df.22) and water temperature (r=0.523, P=<0.05). Skeletonema costatum was the dominant member of phytoplankton and occupied 35.23% of the annual population and occurred throughout the period of study except in September and January. Its abundance was recorded during the monsoon months (April- July) with a maximum density (24185 cells/l) in July. No significant correlation was found between abundance of S. costatum and the hydro-meteorological parameters recorded in the Chakaria mangrove area.

Biodiversity and production of bioactive material from cyanobacteria in Persian Gulf

In this project sampling was done from 9 stations in 3 depths during 5 seasons to separate, identify and examine the biodiversity of cyanobacteria. Another sampling also has been done to analyse all physical and physicochemical parameters, primary production and polluting agents such as heavy metals and oil hydrocarbons in water and sediments. Along with optimization of Oscillatoria to study the ability of producing natural substances, these cyanobacteria were analysed from the point of antimicrobial and mutagenic effects. To examine the relationships among analysed parameters, the regression test, analysis of varian and Post Hoc were used. As the result of this study 48 genus of cyanobacteria were pecognised among which 35.5% were croco ccales and 64.4% were Hermogonals. Oscillatoria was one of the Filamentous cyanobacteria which had antibacterial and mutagenic effects. The results of multicommunity consistency varians test, post Hoc and homogenous subsets show significant difference between biodiversity of cyanotbacteria in coral ecosystem, Mangrove and transite. The linear correlation coefficient between biodiversity of cyanobacteria and bioenvironmental agents were examined, but there was no continuous relation between these factors and biological biodiversity. In Surface layer there was a significant correlation coefficent at 0.048 and probability at 95% confidence interval. Also, the biodiversity is depended on oil pollution and heavy metals such as copper (Cu) and chromium (Cr).

Biology and distribution of grouper (Epinephelus coioides) in province waters (Abadan Bhrakan)

This survay has been done from Januray 2000 till May 2002 in Khouzestan costal waters. Four species of grouper were identified from which orange spotted grouper (Epinephelus coioides) was the dominant species. For studing environmental parameters and reproductive biology, age, growth parameters and mortality rate samples were collected by fishing ship. Samples were taken montly in 4 days by fishing traps and trawls. In addition, some samples were obtained from Khozestan fish landing centres. Environmental factors such as PH, 02, salinity, water temperature and depth of traping areas, were measured. To identify species, morphometric characteries of 452 individal fishes were measured. Stomach contents of 394 fish were has survaid, from which stomach of 226 fish, and 168 fish had empty stomachs. Percentage of empty stomachs (cv) in males was more than females. Food items found in 73 percent of stomach were crab (11%), shrimps (8.8%) , squids (3.9%), gastropods (17%) and bivalves (0.4%). Feeding intensity in year classes did not obay logic trends The importance relatively indicator (I.R.I) were 81, 9.9, 4, 1.5 and 0.3 percent for fish, crab, shrimp, squid, gastropod and bivalve respectively. For age determination, sagita otoliths of 450 fish were taken and countable sections were obtained from 425 specimens. Relative frequency distribution of opaque and transparent rings showed that each opaque growth ring generates once a year from November to September. It seemed that generation of opaque rings is affected by temperature and photoperiod changes. Correlation between length and age was calculated using Von Bertalanffy's least square method. Following equasion was obtaind: L(t) : 122.27 (1 e 0.146 (t+0.482)) Growth parameters were determined through by Ford Walford equasion and Response Surface and Shepherd subcommands in Elefan program and L00 and K amounts were have determined. Correlation between length and age of 635 fish was determined by gender . Length and age correlation was calculated by exponential model and between total length and standard length by straghit line model. Correlation between age and weight of sagita was calculated by total length and age. The most Correlation was between sagita weight and fish age (r=0.876). Total mortality rate (z) was estimated by Length Converthed Method , Jones and Vanzaling and Powel Wetherall. Total mortality rate was z=0.39. Natural mortality rate, using Pauly method was calculated M=0.32. Fishing mortality (F) was 0.08. Gonads of 425 fishes were surveid within 18 month, from which 363 were female, 46 were male and 16 were sex reversing individuals .Total length of females varied from 26 to 95.5 centimeters while males length varied from 56.5 to 107 centimeters. Sex reversing individuals had a length of 47.5 centimeters, when two years old and 62.5 centimeters at age of 3 years. From the mentioned 425 fish, 401 individuals were matured, containing 339 females and 62 males, 5.47 females against each male. Montly changes of Gonadosomatic Index (GSI) by total body weight and standard length and total body length showed that this index increases from march to May and maximum increase was in May . This experiment was adapted in spawning season. Potential, relative, and absoulate fecundity was estimated by counting eggs in three samples. Total amount of traped fish using special traps was 16182.18 kg from which Epinephelus coioides provided catching 15353.43 kg of it (91.27 %) and By catch was 141.18 kg (8.24 %). Total average CPUE for whole catch was 123.33 kg/day/vessel. Total amount of catch was estimated 232.04 tons, considering CPUE of total catch and total Khuzestan trap ships effort.

Changes in fish fauna and the impact of the introductions on fish yield

There have been considerable changes in fish species composition in Lakes victoria, Kyoga and Nabugabo since the Nile perch were introduced. Populations of most of the native species have declined and many species may have become extinct. The original decline in the fish stocks was due to overfishing but the recent and more drastic decline has been attributed to predation by the Nile perch. Nile perch feeds on invertebrates changing to a piscivorous diet with size. Haplochromine cichlids, which were the most abundant fish in Lakes Victoria just before the Nile perch populations started increasing rapidly have been depleted. As more suitable types of prey were depleted in the new habi tats, Nile perch switched to other prey types to the extent of feeding even on its own young. There are, fears that the Nile perch will overshoot its food supply, resulting in a reduction of its own population and subsequently a collapse in the fishery (FAD 1985).

The impact of fishing gears and methods: with recommendations for management of the fisheries of Lakes Victoria, Kyoga and Nabugabo

Historical analysis has shown that use of destructive fishing gears and methods contributed much to the initial depletion of fish stocks from Lakes Victoria and Kyoga. From about 1930 to 1960, the fisheries of Lake Victoria were managed by controlling the mesh size of gill nets. Gill net s of less than 127 mm (5) stretched mesh had been prohibited on Lake Victoria because they cropped immature Oreochromis esculentus (Ngege) which were at that time the most important commercial species. When the mesh size restriction was repealed in the Ugandan, Tanzanian and Kenya, there was a shift to smaller meshes which cropped immature tilapia and other large species and led to a collapse in the fishery.