Questions to Artificial Nature: A Philosophical Study of Interdisciplinary Models and their Functions in Scientific Practice

This thesis presents an interdisciplinary analysis of how models and simulations function in the production of scientific knowledge. The work is informed by three scholarly traditions: studies on models and simulations in philosophy of science, so-called micro-sociological laboratory studies within science and technology studies, and cultural-historical activity theory. Methodologically, I adopt a naturalist epistemology and combine philosophical analysis with a qualitative, empirical case study of infectious-disease modelling. This study has a dual perspective throughout the analysis: it specifies the modelling practices and examines the models as objects of research. The research questions addressed in this study are: 1) How are models constructed and what functions do they have in the production of scientific knowledge? 2) What is interdisciplinarity in model construction? 3) How do models become a general research tool and why is this process problematic? The core argument is that the mediating models as investigative instruments (cf. Morgan and Morrison 1999) take questions as a starting point, and hence their construction is intentionally guided. This argument applies the interrogative model of inquiry (e.g., Sintonen 2005; Hintikka 1981), which conceives of all knowledge acquisition as process of seeking answers to questions. The first question addresses simulation models as Artificial Nature, which is manipulated in order to answer questions that initiated the model building. This account develops further the "epistemology of simulation" (cf. Winsberg 2003) by showing the interrelatedness of researchers and their objects in the process of modelling. The second question clarifies why interdisciplinary research collaboration is demanding and difficult to maintain. The nature of the impediments to disciplinary interaction are examined by introducing the idea of object-oriented interdisciplinarity, which provides an analytical framework to study the changes in the degree of interdisciplinarity, the tools and research practices developed to support the collaboration, and the mode of collaboration in relation to the historically mutable object of research. As my interest is in the models as interdisciplinary objects, the third research problem seeks to answer my question of how we might characterise these objects, what is typical for them, and what kind of changes happen in the process of modelling. Here I examine the tension between specified, question-oriented models and more general models, and suggest that the specified models form a group of their own. I call these Tailor-made models, in opposition to the process of building a simulation platform that aims at generalisability and utility for health-policy. This tension also underlines the challenge of applying research results (or methods and tools) to discuss and solve problems in decision-making processes.

WAIS seminar: Publication Workflows for Scientific Data

Wednesday 23rd April 2014 Speaker(s): Willi Hasselbring Organiser: Leslie Carr Time: 23/04/2014 11:00-11:50 Location: B32/3077 File size: 669 Mb Abstract For good scientific practice, it is important that research results may be properly checked by reviewers and possibly repeated and extended by other researchers. This is of particular interest for "digital science" i.e. for in-silico experiments. In this talk, I'll discuss some issues of how software systems and services may contribute to good scientific practice. Particularly, I'll present our PubFlow approach to automate publication workflows for scientific data. The PubFlow workflow management system is based on established technology. We integrate institutional repository systems (based on EPrints) and world data centers (in marine science). PubFlow collects provenance data automatically via our monitoring framework Kieker. Provenance information describes the origins and the history of scientific data in its life cycle, and the process by which it arrived. Thus, provenance information is highly relevant to repeatability and trustworthiness of scientific results. In our evaluation in marine science, we collaborate with the GEOMAR Helmholtz Centre for Ocean Research Kiel.

Standardization and omics science : technical and social dimensions are inseparable and demand symmetrical study

Standardization is critical to scientists and regulators to ensure the quality and interoperability of research processes, as well as the safety and efficacy of the attendant research products. This is perhaps most evident in the case of “omics science,” which is enabled by a host of diverse high-throughput technologies such as genomics, proteomics, and metabolomics. But standards are of interest to (and shaped by) others far beyond the immediate realm of individual scientists, laboratories, scientific consortia, or governments that develop, apply, and regulate them. Indeed, scientific standards have consequences for the social, ethical, and legal environment in which innovative technologies are regulated, and thereby command the attention of policy makers and citizens. This article argues that standardization of omics science is both technical and social. A critical synthesis of the social science literature indicates that: (1) standardization requires a degree of flexibility to be practical at the level of scientific practice in disparate sites; (2) the manner in which standards are created, and by whom, will impact their perceived legitimacy and therefore their potential to be used; and (3) the process of standardization itself is important to establishing the legitimacy of an area of scientific research.

Pedagogical tools designed to promote engagement and active learning in the biomedical sciences and allied health disciplines

Perceiving students, science students especially, as mere consumers of facts and information belies the importance of a need to engage them with the principles underlying those facts and is counter-intuitive to the facilitation of knowledge and understanding. Traditional didactic lecture approaches need a re-think if student classroom engagement and active learning are to be valued over fact memorisation and fact recall. In our undergraduate biomedical science programs across Years 1, 2 and 3 in the Faculty of Health at QUT, we have developed an authentic learning model with an embedded suite of pedagogical strategies that foster classroom engagement and allow for active learning in the sub-discipline area of medical bacteriology. The suite of pedagogical tools we have developed have been designed to enable their translation, with appropriate fine-tuning, to most biomedical and allied health discipline teaching and learning contexts. Indeed, aspects of the pedagogy have been successfully translated to the nursing microbiology study stream at QUT. The aims underpinning the pedagogy are for our students to: (1) Connect scientific theory with scientific practice in a more direct and authentic way, (2) Construct factual knowledge and facilitate a deeper understanding, and (3) Develop and refine their higher order flexible thinking and problem solving skills, both semi-independently and independently. The mindset and role of the teaching staff is critical to this approach since for the strategy to be successful tertiary teachers need to abandon traditional instructional modalities based on one-way information delivery. Face-to-face classroom interactions between students and lecturer enable realisation of pedagogical aims (1), (2) and (3). The strategy we have adopted encourages teachers to view themselves more as expert guides in what is very much a student-focused process of scientific exploration and learning. Specific pedagogical strategies embedded in the authentic learning model we have developed include: (i) interactive lecture-tutorial hybrids or lectorials featuring teacher role-plays as well as class-level question-and-answer sessions, (ii) inclusion of “dry” laboratory activities during lectorials to prepare students for the wet laboratory to follow, (iii) real-world problem-solving exercises conducted during both lectorials and wet laboratory sessions, and (iv) designing class activities and formative assessments that probe a student’s higher order flexible thinking skills. Flexible thinking in this context encompasses analytical, critical, deductive, scientific and professional thinking modes. The strategic approach outlined above is designed to provide multiple opportunities for students to apply principles flexibly according to a given situation or context, to adapt methods of inquiry strategically, to go beyond mechanical application of formulaic approaches, and to as much as possible self-appraise their own thinking and problem solving. The pedagogical tools have been developed within both workplace (real world) and theoretical frameworks. The philosophical core of the pedagogy is a coherent pathway of teaching and learning which we, and many of our students, believe is more conducive to student engagement and active learning in the classroom. Qualitative and quantitative data derived from online and hardcopy evaluations, solicited and unsolicited student and graduate feedback, anecdotal evidence as well as peer review indicate that: (i) our students are engaging with the pedagogy, (ii) a constructivist, authentic-learning approach promotes active learning, and (iii) students are better prepared for workplace transition.

Undervisning i forskningsetik

Abstract (Teaching in research ethics): The aim of this paper is to discuss teaching in research ethics. According to the guidelines issued by the National Advisory Board on Research Ethics in Finland (2002) the units providing researcher training have a duty to include good scientific practice and research ethics in this training. Various kinds of materials are needed in teaching in research ethics. One of them is fiction, which has appeared to be helpful in discussions of ethic problems. A number of examples taken from Finnish and Swedish fiction are discussed by referring to the above mentioned guidelines. The presentation is based on a chiasm, i.e. it goes from good scientific practice to fiction and further from fiction to teaching in research ethics.

A probability-based approach to setting annual catch levels.

The requirement of setting annual catch limits to prevent overfishing has been added to the Magnuson-Stevens Fishery Conservation and Management Reauthorization Act of 2006 (MSRA). Because this requirement is new, a body of applied scientific practice for deriving annual catch limits and accompanying targets does not yet exist. This article demonstrates an approach to setting levels of catch that is intended to keep the probability of future overfishing at a preset low level. The proposed framework is based on stochastic projection with uncertainty in population dynamics. The framework extends common projection methodology by including uncertainty in the limit reference point and in management implementation, and by making explicit the risk of overfishing that managers consider acceptable. The approach is illustrated with application to gag (Mycteroperca microlepis), a grouper that inhabits the waters off the southeastern United States. Although devised to satisfy new legislation of the MSRA, the framework has potential application to any fishery where the management goal is to limit the risk of overfishing by controlling catch.

Teoria marxista do conhecimento: contribuições do materialismo dialético para a pesquisa em Educação

A tese tem como objetivo central a apresentação do que chamamos de teoria marxista do conhecimento e resulta de um trabalho estritamente teórico através do qual buscamos extrair de escritos teóricos de K. Marx, I. Lênin, L. Althusser e de escritos metodológicos da cientista social M. Cardoso, os elementos de fundamentação epistemológica da ciência marxista, ou seja, a teorização marxista sobre a prática científica. Para tal, buscamos apoio na distinção althusseriana entre materialismo histórico e materialismo dialético, a partir da qual apresentamos as teses filosóficas do marxismo e os princípios da ciência marxista. A tese apresenta os elementos da filosofia marxista como uma teoria geral da ciência e, também, procura apresentar uma teorização particular sobre metodologia científica em relação à ciência marxista. A tese busca desenvolver uma reflexão epistemológica que possa contribuir para a produção de conhecimento em Educação e, também, para a luta teórica da filosofia marxista contra as vertentes idealistas e empiristas concernentes à pesquisa educacional atual.

Objetividade e matemática na epistemologia de Gaston Bachelard

O conceito de objetividade é central na epistemologia de Gaston Bachelard (1884-1962). O problema que a pesquisa busca solucionar é a definição de objetividade na filosofia bachelardiana, o que implica na necessidade de explicitar a relação entre a objetividade e a matemática. A partir da leitura e da análise da obra epistemológica de Bachelard que trata da questão da objetividade, é demonstrado que o filósofo utiliza dois diferentes conceitos de objetividade: o primeiro é o de objetividade como reconhecimento e afastamento dos obstáculos epistemológicos que se apresentam como imagens subjetivas na prática científica; o segundo conceito é o de objetividade como o processo de retificação do conhecimento científico. Apresenta-se um exemplo de objetivação: o conceito de substância, no sentido realista ingênuo, desaparece nas ciências físicas do século XX, e surge o conceito complexo de um átomo não substancial, mas matemático. A partir desse exemplo, é demonstrado que, para Bachelard, o processo de objetivação do conhecimento é sincrônico ao processo de matematização do objeto. e a razão para essa relação entre a matematização e a objetivação é explicada.

A Prática como Componente Curricular em licenciaturas de Letras: um estudo discursivo das relações entre teoria e prática

O objetivo deste trabalho foi investigar, a partir da reforma das licenciaturas nas universidades ocorrida em 2001, a constituição do eixo disciplinar Prática como Componente Curricular (PCC) nos currículos de licenciatura de cursos de Letras, Português / Espanhol da região sudeste brasileira, focando-nos na relação entre teoria e prática. Para tal discussão, utilizamo-nos das reflexões de Deleuze (1968) a fim de problematizar as possibilidades de repetição total ou de diferenciação total; Vázquez (1977), ao trazer sua discussão de práxis que trata da indissociabilidade da teoria e da prática e Schwartz (2010), para incorporar a discussão sobre o âmbito do trabalho, em particular no que concerne a impossibilidade de antecipação completa da atividade a ser realizada por um profissional. Operamos, também, com os preceitos da Análise do Discurso de base enunciativa (MAINGUENEAU, 1998, 2003) quando tratamos os enunciados como socio-historicamente situados em nossas análises. Para atingirmos nosso fim, realizamos uma contextualização documental que contou com a análise do Parecer CNE/CP 28/2001, no qual estão as determinações sobre carga horária e definição dos eixos de disciplinas da licenciatura, sendo eles: Acadêmico Científico, Prática como Componente Curricular e Estágio Supervisionado. Voltamo-nos, também, para os Projetos Políticos Pedagógicos das universidades analisadas, a fim de investigar qual o entendimento de prática construído nesses documentos. Por fim, recorremos às ementas das disciplinas obrigatórias de PCC oferecidas pelas universidades que compuseram o córpus, buscando identificar as marcas que aproximam a temática da disciplina com o trabalho que considere a prática docente, já que o eixo em questão pressupõe essa discussão. Como critérios de seleção de córpus, consideramos: contemplar uma universidade de cada estado da Região Sudeste; duas universidades que possuem disciplinas que contenham exclusivamente horas de PCC e outras duas que contenham, em uma mesmo disciplina, horas dos eixos de PCC e Acadêmico Científico. Com isso, as universidades analisadas são: UERJ, UFSCar, UFES e UFTM.

Paul Karl Feyerabend Las proyecciones de la proliferación teórica en la relación ciencia-metafísica

La doctrina de la Proliferación teórica de Paul Karl Feyerabend ha sido interpretada por sus especialistas como un intento de salvaguardar el ideal del progreso científico. Aunque tales estudios hacen justicia, en parte, a la intencionalidad de nuestro filósofo no explicitan la crítica fundamental que implica para Feyerabend el pluralismo teórico. La proliferación teórica constituye en sí misma una reductio ad absurdum de los distintos intentos del positivismo lógico y del racionalismo crítico por definir la ciencia a expensas de lo metafísico. Este artículo presenta la proliferación teórica como una reivindicación del papel positivo que ocupa la metafísica en el quehacer científico. Se consigna la defensa que hace Feyerabend de la metafísica en cuanto que ésta constituye la posibilidad de superar el conservadurismo conceptual, aumentar de contenido empírico de la ciencia y recuperar el valor descriptivo de las teorías científicas.

Mid-Century Molecular: The Material Culture of X-ray Crystallographic Visualisation across Postwar British Science and Industrial Design

This thesis investigates the use and significance of X-ray crystallographic visualisations of molecular structures in postwar British material culture across scientific practice and industrial design. It is based on research into artefacts from three areas: X-ray crystallographers’ postwar practices of visualising molecular structures using models and diagrams; the Festival Pattern Group scheme for the 1951 Festival of Britain, in which crystallographic visualisations formed the aesthetic basis of patterns for domestic objects; and postwar furnishings with a ‘ball-and-rod’ form and construction reminiscent of those of molecular models. A key component of the project is methodological. The research brings together subjects, themes and questions traditionally covered separately by two disciplines, the history of design and history of science. This focus necessitated developing an interdisciplinary set of methods, which results in the reassessment of disciplinary borders and productive cross-disciplinary methodological applications. This thesis also identifies new territory for shared methods: it employs network models to examine cross-disciplinary interaction between practitioners in crystallography and design, and a biographical approach to designed objects that over time became mediators of historical narratives about science. Artefact-based, archival and oral interviewing methods illuminate the production, use and circulation of the objects examined in this research. This interdisciplinary approach underpins the generation of new historical narratives in this thesis. It revises existing histories of the cultural transmissions between X-ray crystallography and the production and reception of designed objects in postwar Britain. I argue that these transmissions were more complex than has been acknowledged by historians: they were contingent upon postwar scientific and design practices, material conditions in postwar Britain and the dynamics of historical memory, both scholarly and popular. This thesis comprises four chapters. Chapter one explores X-ray crystallographers’ visualisation practices, conceived here as a form of craft. Chapter two builds on this, demonstrating that the Festival Pattern Group witnesses the encounter between crystallographic practice, design practice and aesthetic ideologies operating within social networks associated with postwar modernisms. Chapters three and four focus on ball-and-rod furnishings in postwar and present-day Britain, respectively. I contend that strong relationships between these designed objects and crystallographic visualisations, for example the appellation ‘atomic design’, have been largely realised through historical narratives active today in the consumption of ‘retro’ and ‘mid-century modern’ artefacts. The attention to contemporary historical narratives necessitates this dual historical focus: the research is rooted in the period from the end of the Second World War until the early 1960s, but extends to the history of now. This thesis responds to the need for practical research on methods for studying cross-disciplinary interactions and their histories. It reveals the effects of submitting historical subjects that are situated on disciplinary boundaries to interdisciplinary interpretation. Old models, such as that of unidirectional ‘influence’, subside and the resulting picture is a refracted one: this study demonstrates that the material form and meaning of crystallographic visualisations, within scientific practice and across their use and echoes in designed objects, are multiple and contingent.

De la pertinence d'une approche sélectionniste en épistémologie : Hull contre Kitcher

David Hull et Philip Kitcher présentent tous deux une description des sciences qui tient compte autant de l'articulation logique des théories que de leur dynamique sociale. Hull (1988a, 2001) tente de rendre compte du progrès scientifique par le biais d'une analyse sélectionniste, en s'appuyant sur les contingences sociales et les biais individuels en tant que pressions de sélections. Pour lui, un processus de sélection darwinien filtre les théories supérieures des théories inadéquates. Kitcher (1993) présente plutôt le progrès scientifique comme un changement de consensus résultant de processus sociaux et psychologiques qui mènent de manière fiable à la vérité. Les théories sont ainsi filtrées par une dynamique sociale qui sélectionne les théories selon la qualité de leur articulation logique. Kitcher (1988) exprime un doute à l'idée qu'un processus de sélection darwinien du type suggéré par Hull puisse ajouter quoi que ce soit à une explication du processus d'avancement des sciences. Ce mémoire tentera d'établir si cette critique de Kitcher est fondée. Dans cette optique, une analyse détaillée de l’approche de Hull sera nécessaire afin d’examiner comment il justifie le lien qu’il établit entre la pratique scientifique et un processus de sélection. Un contraste sera ensuite fait avec l’approche de Kitcher pour tester la force et la nécessité de ce lien et pour expliquer le désaccord de Kitcher. Cette analyse comparative permettra de préciser les avantages et les désavantages uniques à chacune des approches pour déterminer si une analyse sélectionniste est plus prometteuse qu’une analyse non-sélectionniste pour rendre compte du progrès scientifique.

Analise critica dos testes de inteligência ou aptidão psicológica

Este trabalho tem como objetivo fundamental proceder a uma análise teórico-critica dos testes de inteligência ou aptidão psicológica, entendidos como instrumentos que fornecem um tipo de medida "objetiva" do comportamento e que são construidos obedecendo a normas e critérios definidos pela "Psicometria" - ramo da "disciplina psicológica" que se ocupa da "teoria" e "metodologia" de construção de testes. A dissertação se compõe de quatro capítulos e uma conclusão. Nos dois primeiros capítulos examinam-se as categorias teóricas de "prática técnica': e "prática teórica ou iden¬tifica", procurando-se demonstrar que os testes de inteligência se constituem por um processo de construção técnico-ideológico, cujo mecanismo visa responder a uma determinação externa - uma "demanda social"- de "adaptação-readaptação" dos indivíduos na ordem social. No terceiro capitulo busca-se enfocar a "demanda social" dos testes de inteligência pela análise de determinadas concepções ideológicas que colocam a questão da inteligência e das aptidões como responsáveis pela hierarquização social. Evidencia-se que cumprindo "cientificamente" as funções de sele cionar, classificar e diferenciar os indivíduos, os testes sancionam um certo saber sobre a inteligência que tende a reproduzir as relações sociais especificas do modo de produção das chamadas sociedades capitalistas. No quarto capitulo analisam-se as contribuições de Michel Foucault sobre as práticas de exame (entre as quais se incluem os testes psicológicos) enfatizando-se que tais práticas emergem historicamente como objetos de saber e efeitos de poder e se constituem, fundamentalmente por essa articulação. Finalmente conclui-se por uma certa impossibilidade de se tratar os testes e a inteligência que eles produzem Unicamente ao nível da distinção ciência-ideologia, procurando-se avançar para uma posição em que se torna prioritário justamente identificar as articulações de poder presentes em qualquer produção de saber.

Vozes sociais e dimensão ética da lingüística aplicada: a construção discursiva da área nos CBLAs

This research deals with Applied Linguistics and its structure as a scientific field, in compliance with knowledge produced within the range of the Brazilian Congresses of Applied Linguistics (CBLA). The purpose of this research is to understand the meanings disclosed by the voices that make up the scientific discourse on this field, pointing toward its course of development, the ethical position that is peculiar to it and how this position is represented in its scientific practice. The scientific discourse typical of the production of knowledge of Applied Linguistics is now construed as leading to practices that define the production of this field of learning whose object is to study man and man s relationship to language. Theoretical groundwork is anchored on the work the Social Sciences have developed on the paradigmatic crises of science and the social changes resulting from modern and post-modern times, on Applied Linguistics researches on the identity of the field of study, its courses and ethics, and on the bakhtinian theory that supports a view of language as a social practice built under the aegis of the subject s ethics and responsibility. The corpus of this work comprises qualitative and quantitative data made into articles presented at the CBLA. The research methodology conforms to the interpretive paradigm and has the concept of social voices as its category of analysis. Results point towards the progress of Applied Linguistics that, from its role as a mediator discipline between linguistic theory and practical applications, is assuming a position in a field of study of its own, independent, with transdisciplinary characteristics, pursuing through its quests and redefinitions to get closer to the dimension of life and assuming the ethical position of taking on responsibility for its doings and sayings

A produção de conhecimento científico da educação física na Sociedade Brasileira para o Progesso da Ciência (SBPC)

Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)