Colonization of rocky and leaf pack substrates by benthic macroinvertebrates in a stream in southeast Brazil.

A comparative analysis was conducted of the colonization by benthic macroinvertebrates of rocky and leaf pack substrates, both natural and artificial. This colonization was evaluated by season, with the objective of ascertaining the influence of rainfall on the rate of colonization. The total density of macroinvertebrates after 21 days of colonization was significantly greater in the dry than in the wet season. When the substrate types were compared, artificial leaf pack substrate presented the smallest density for both seasons. In the wet season, Chironomidae, Leptohyphidae, Hydropsychidae, Elmidae, immature stages of Trichoptera, and Hydroptilidae showed a more representative density. In the dry season, Chironomidae, Baetidae and Oligochaeta were the most abundant taxa. The artificial rocky substrate used in this experiment was the most appropriate, due to its resemblance with natural substrate conditions in terms of the maintenance of the structural integrity of the substrate throughout the experimental period. Successional and seasonal effects were of great relevance, playing an important role in the colonization process.

Influences of agricultural landuse and seasonal changes in abiotic conditions on invertebrate colonisation of riparian leaf detritus in intermittent streams

The structure and function of agricultural stream reaches with sparse riparian and floodplain vegetation differ from those of forested reaches, but may be ‘reset’ as these streams flow through reaches with forested riparian zones. We investigated whether invertebrate colonisation of River Red Gum (Eucalyptus camaldulensis) leaf packs in lowland intermittent streams was influenced by the adjacent reach-scale landuse (cleared farmland or forested reserve) within an agricultural catchment in Victoria, Australia. Further, we examined the influence of seasonal changes in hydrology and associated changes in abiotic conditions on the colonisation of leaves by repeating experiments over two summers and one spring. Across these experiments, there were no consistent differences in the structure of communities that colonised leaves in farmland and reserve reaches. In both seasons, most leaf colonists were collectors and few were shredders in both farmland and reserve reaches. Relative abundances of gastropod grazers were much higher in summer than in spring. The structure of invertebrate communities colonising leaves in the different reaches converged over time when streams flowed in spring, but diverged over time as the streams dried and abiotic conditions within disconnected pools became increasingly harsh in summer. Thus, patterns of leaf pack colonisation were influenced by the regional climate causing large seasonal changes in hydrology, but not by reach-scale landuse. The large-scale disturbances of agricultural landuse across the catchment and a supra-seasonal drought probably contributed to low diversities of invertebrate communities in the streams.

Decomposição foliar e produção secundária como indicadores funcionais em um gradiente de impacto de cobertura do solo ripário em rios tropicais

Atualmente a maior ameaça à integridade de ecossistemas aquáticos reside nas ações antrópicas, que através de alterações na cobertura vegetal ripária, atingem todos os compartimentos dos sistemas lóticos, alterando a estrutura física, química e biológica do rio e os padrões de ligação entre ecossistemas terrestres e aquáticos. A importância dos macroinvertebrados fragmentadores ainda não é bem conhecida nos trópicos. Eles podem contribuir para a decomposição de folhas em córregos, que é um processo fundamental para o fluxo de energia em rios de pequeno porte. Os processos de decomposição e produção secundária de macroinvertebrados aquáticos nos ecossistemas lóticos são intimamente relacionados com o aporte da vegetação terrestre, e podem ser sensíveis às alterações na cobertura vegetal ripária. Os objetivos desse estudo foram avaliar: (a) quais mudanças o desmatamento pode causar nos parâmetros físicos e químicos de rios; (b) os efeitos do desmatamento sobre a estrutura da comunidade de macroinvertebrados bentônicos associados às folhas, (c) nos processos ecossistêmicos, como decomposição foliar e produção secundária, e (d) a associação entre produção secundária de fragmentadores e decomposição foliar. O estudo foi realizado em 27 locais distribuídos em quatro córregos (7-8 locais por rio) de segunda-terceira ordem e que apresentavam um gradiente de desmatamento. Para estimar a taxa de decomposição, cinco pacotes de folha foram imersos em cada um dos pontos. Um pacote de folha foi retirado de cada ponto após 2, 7, 15 e 28 dias de imersão. O quinto pacote de folha foi retirado no 37 dia de imersão para as estimativas de produção secundária, biodiversidade e a diversidade funcional de insetos aquáticos. As concentrações de amônio aumentaram e a riqueza de espécies de insetos aquáticos e de EPTs (Ephemeroptera, Plecoptera e Trichoptera) dos pacotes de folhas diminuíram com o aumento do desmatamento. As taxas de decomposição diminuíram com o aumento do desmatamento. Os dados sugerem que a perda de vegetação ripária pela conversão em agropecuária teve impacto em parâmetros químicos e bióticos, tanto na estrutura da comunidade de macroinvertebrados quanto no funcionamento do ecossistema. Concluímos que a restauração e preservação da mata ripária deve ser um foco central das estratégias de gestão de ecossistemas lóticos para assegurar que os processos ecossistêmicos e a estrutura das comunidades em bacias hidrográficas estejam agindo como provedores dos serviços ambientais esperados.

Pathways for algal recolonization in seasonally-flowing streams

1. In semi-arid climates, seasonally-flowing streams provide most of the water required for human use, but knowledge of how water extraction affects ecological processes is limited. Predicted alterations in stream flows associated with the impacts of climate change further emphasize the need to understand these processes. Benthic algae are an important base for stream food webs, but we have little knowledge of how algae survive dry periods or respond to altered flow regimes.

2. We sampled 19 streams within the Grampians National Park, south-eastern Australia and included four components: a survey of different drought refuges (e.g. permanent pools, dry biofilm on stones and dry leaf packs) and associated algal taxa; a survey of algal regrowth on stones after flows recommenced to determine which refuges contributed to regrowth; reciprocal transplant experiments to determine the relative importance of algal drift and regrowth from dry biofilm in recolonization; direct measurement of algal drift to determine taxonomic composition in relation to benthic assemblage composition.

3. Algae showed little specificity for drought refuges but did depend on them; no species were found that were not present in at least one of the perennial pool, dry biofilm or leaf pack refuges. Perennial pools were most closely correlated with the composition of algal assemblages once flows resumed, but the loss or gain of perennial pools that might arise from stream regulation is unlikely to affect the composition of algal regrowth. However, regulated streams were associated with strong increases in algal density in dry biofilm, including increased densities of Cyanobacteria.

4. A model for algal recolonization in seasonally-flowing streams identified three pathways for algal recolonization (drift-dependent, dry biofilm-dependent and contributions from both), depending on whether streams are diatom-dominated or dominated by filamentous algae. The model predicted the effects of changes to stream flow regimes on benthic algal recolonization and provides a basis for hypotheses testable in streams elsewhere.

The effects of land use on leaf-litter processing by macro-invertebrates in an Australian temperate coastal stream

Replacement of riparian vegetation by pasture has occurred worldwide and is predicted to have strong effects on macroinvertebrate community structure and function in streams, but this has rarely been examined. In this study, leaf processing and macroinvertebrate community structure were examined in a single stream using experimental leaf-packs and surveys of natural leaf-packs. Two sites in each of three land use categories were selected to represent reaches in forest, pasture and forest-pasture boundary regions. In two experiments using tethered leaf-packs, no differences were found in mean leaf breakdown between land use types. However, shredding invertebrates were absent from the pasture sites, so leaf breakdown in pasture resulted from chemical, physical and microbial processes only. Amounts of fine particulate organic matter in experimental leaf-packs were higher in pasture reaches than the forest and boundary reaches but did not influence leaf breakdown. Macroinvertebrate species richness did not differ between land uses. A predictive model developed for species richness and total abundance enabled direct comparison of assemblages on experimental packs to natural leaf-packs. In the forest reach and at the forest-pasture boundary, macroinvertebrate species richness and total abundance increased proportionally with the number of leaves within a pack, but this relationship was not observed in the pasture reach. Pasture land use on Skenes Creek was therefore associated with weakened relationships between allochthonous inputs and macroinvertebrate communities, but this did not alter leaf breakdown.

Modelling water droplet movement on a leaf surface

The central aim for the research undertaken in this PhD thesis is the development of a model for simulating water droplet movement on a leaf surface and to compare the model behavior with experimental observations. A series of five papers has been presented to explain systematically the way in which this droplet modelling work has been realised. Knowing the path of the droplet on the leaf surface is important for understanding how a droplet of water, pesticide, or nutrient will be absorbed through the leaf surface. An important aspect of the research is the generation of a leaf surface representation that acts as the foundation of the droplet model. Initially a laser scanner is used to capture the surface characteristics for two types of leaves in the form of a large scattered data set. After the identification of the leaf surface boundary, a set of internal points is chosen over which a triangulation of the surface is constructed. We present a novel hybrid approach for leaf surface fitting on this triangulation that combines Clough-Tocher (CT) and radial basis function (RBF) methods to achieve a surface with a continuously turning normal. The accuracy of the hybrid technique is assessed using numerical experimentation. The hybrid CT-RBF method is shown to give good representations of Frangipani and Anthurium leaves. Such leaf models facilitate an understanding of plant development and permit the modelling of the interaction of plants with their environment. The motion of a droplet traversing this virtual leaf surface is affected by various forces including gravity, friction and resistance between the surface and the droplet. The innovation of our model is the use of thin-film theory in the context of droplet movement to determine the thickness of the droplet as it moves on the surface. Experimental verification shows that the droplet model captures reality quite well and produces realistic droplet motion on the leaf surface. Most importantly, we observed that the simulated droplet motion follows the contours of the surface and spreads as a thin film. In the future, the model may be applied to determine the path of a droplet of pesticide along a leaf surface before it falls from or comes to a standstill on the surface. It will also be used to study the paths of many droplets of water or pesticide moving and colliding on the surface.

Modelling water droplet movement on a leaf surface

Modelling droplet movement on leaf surfaces is an important component in understanding how water, pesticide or nutrient is absorbed through the leaf surface. A simple mathematical model is proposed in this paper for generating a realistic, or natural looking trajectory of a water droplet traversing a virtual leaf surface. The virtual surface is comprised of a triangular mesh structure over which a hybrid Clough-Tocher seamed element interpolant is constructed from real-life scattered data captured by a laser scanner. The motion of the droplet is assumed to be affected by gravitational, frictional and surface resistance forces and the innovation of our approach is the use of thin-film theory to develop a stopping criterion for the droplet as it moves on the surface. The droplet model is verified and calibrated using experimental measurement; the results are promising and appear to capture reality quite well.

Molecular characterisation of six badnavirus species associated with leaf streak disease of banana in East Africa

Banana leaf streak disease, caused by several species of Banana streak virus (BSV), is widespread in East Africa. We surveyed for this disease in Uganda and Kenya, and used rolling-circle amplification (RCA) to detect the presence of BSV in banana. Six distinct badnavirus sequences, three from Uganda and three from Kenya, were amplified for which only partial sequences were previously available. The complete genomes were sequenced and characterised. The size and organisation of all six sequences was characteristic of other badnaviruses, including conserved functional domains present in the putative polyprotein encoded by open reading frame (ORF) 3. Based on nucleotide sequence analysis within the reverse transcriptase/ribonuclease H-coding region of open reading frame 3, we propose that these sequences be recognised as six new species and be designated as Banana streak UA virus, Banana streak UI virus, Banana streak UL virus, Banana streak UM virus, Banana streak CA virus and Banana streak IM virus. Using PCR and species-specific primers to test for the presence of integrated sequences, we demonstrated that sequences with high similarity to BSIMV only were present in several banana cultivars which had tested negative for episomal BSV sequences.

UK pre-pack reforms : pause for thought in Australia?

On 31 March 2011 the UK Government announced new measures to regulate the use of pre-packaged sales in administration. The legislation is not expected until later in 2011, but the announcement heralds a shift in regulatory attitudes towards pre-packs in the UK which should give all local pre-pack advocates pause for thought when considering the merits of embracing the procedure in Australia. In the Jan-March 2011 edition of the Australian Insolvency Journal, an interesting article by Nicholas Crouch and Shabnam Amirbeaggi extolled the virtues of pre-packs and called for “legislative reform to embrace pre-packs” in Australia. By way of reply (and in a spirit of constructive debate) this article respectfully contends that while pre-packs certainly have their place in preserving business value in certain circumstances, Australia should be careful not to sleepwalk into adopting a procedure which legitimises phoenixing at the expense of creditor confidence and participation in our insolvency regime.