The in situ physiology of "Nostocoida limicola" II, a filamentous bacterial morphotype in bulking activated sludge, using fluorescence in situ hybridization and microautoradiography

The in situ physiology of the actinobacterial bulking and foaming filamentous bacterium "Nostocoida limicola" II was studied by fluorescence in situ hybridization/microautoradiography. Substrate assimilation patterns of pure cultures of this bacterium were different to those seen in activated sludge biomass samples. There was no evidence to suggest that "N. limicola" II preferred hydrophobic substrates, but evidence was produced to support the view that it is metabolically active under anaerobic conditions in activated sludge.

Isolates of 'Candidatus Nostocoida limicola' Blackall et al. 2000 should be described as three novel species of the genus Tetrasphaera, as Tetrasphaera jenkinsii sp nov., Tetrasphaera vanveenii sp nov and Tetrasphaera veronensis sp nov.

Despite differences in their morphologies, comparative analyses of 16S rRNA gene sequences revealed high levels of similarity (> 94 %) between strains of the filamentous bacterium 'Candidatus Nostocoida limicola' and the cocci Tetrasphaera australiensis and Tetrasphaera japonica and the rod Tetrasphaera elongata, all isolated from activated sludge. These sequence data and their chemotaxonomic characters, including cell wall, menaquinone and lipid compositions and fingerprints of their 16S-23S rRNA intergenic regions, support the proposition that these isolates should be combined into a single genus containing six species, in the family Intrasporangiaceae in the Actinobacteria. This suggestion receives additional support from DNA-DNA hybridization data and when partial sequences of the rpoC1 gene are compared between these strains. Even though few phenotypic characterization data were obtained for these slowly growing isolates, it is proposed, on the basis of the extensive chemotaxonomic and molecular evidence presented here, that 'Candidatus N. limicola' strains Ben 17, Ben 18, Ben 67, Ben 68 and Ben 74 all be placed into the species Tetrasphaera jenkinsii sp. nov. (type strain Ben 74(T) = DSM 17519(T) = NCIMB 14128(T)), 'Candidatus N. limicola' strain Ben 70 into Tetrasphaera vanveenii sp. nov. (type strain Ben 70(T) = DSM 17518(T) = NCIMB 14127(T)) and 'Candidatus N. limicola' strains Ver 1 and Ver 2 into Tetrasphaera veronensis sp. nov. (type strain Ver 1(T) = DSM 17520(T) = NCIMB 14129(T)).

泥生绿菌的分离鉴定及其在净化废水中作用的初步探讨

本文介绍了从厌氧间歇膨胀光合反应器内的活性污泥中分离并鉴定的泥生绿菌(Chlorobium limicola Nadson)S1,它属严格厌氧光能自养型细菌，在有硫化物和少量碳酸氢盐存在下，有广泛利用有机物的能力，它的最适生长温度为28-30℃,最适生长PH为6.5-7.0，且含有氢化酶。因此，它能与甲烷发酵菌共存而共同作用，达到废水净化之目的。通过光照(2#反应器)和黑暗(1#反应器)对比实验，表明了在光照条件下即有泥生绿菌S1存在下，反应系统能更好地降低CODcr、BOD5 和提高CH4 含量，在四个负荷段的运行中，2#反应器在后三个负荷段的甲烷含量能稳定在91.6%而1#反应器为87%，2#反应器的二氧化碳含量为4.5%而1#反应器为8.8%，于28.35g/l.d的负荷下，2#反应器CODcr去除率达83.4%，BOD去除率达74.53%，分别较1#反应器高10.8%,6.4%。COD去除率提高了14%，BOD去除率提高了9.3%。本试验的试验条件为：白天自然光照，晚上电源光照，光照强度为1000-2500lux，通过连续动态运转，并以恒定的流速将废液注入反应器中，进水PH控制在6.5-7.2，反应器厌氧，恒温室温度控制在30±1℃。为使整个试验中同一水质条件下进行，进水采用化学合成培养基。This paper reports a Chlorobium Liwicola S1's isolation and identification. It is a strictly anaerobic and photosynthetic autotrophic bacterium. Along with sulfidedepondent CO2 assiwilaton,a few simple organic compounds can be photoassimilated. Acetate is most effectively used. Its best conditons of growth are 28-30℃,PH 6.5-7.0, and it contains hydrogenase. So it can live with methanefermentative bacteria in order to treat wastewater. At the same time, the treatment of wastwater using Chlorobium Limicola S1 with methane-fermontative bacteria under dark anaerobic and light anaerobic conditions is studied. In contrast with 1# reactor-darken, 2# reactor-illuminated can lossen wastewater's CODcr, BOD5 and on hance CH4 content better. In the test, 2# reactor's CH4 content is stable at 91.6%, but 1# reactor's is 87%. The CO2 content of 2# reactor is 4.5%, but 1# reactor's is 8.8%. When the load of teatment is 28.35g/l.d, the COD removal effficiency is 83.4% and the BOD removal efficiency is 74.53% in 2# reactor. They are separately 10.8%, 6.4% higher than 1# reactor's.

Abundance and biomass of the benthic infauna of the North Sea

In 1986 participants of the Benthos Ecology Working Group of ICES conducted a synoptic mapping of the infauna of the southern and central North Sea. Together with a mapping of the infauna of the northern North Sea by Eleftheriou and Basford (1989, doi:10.1017/S0025315400049158) this provides the database for the description of the benthic infauna of the whole North Sea in this paper. Division of the infauna into assemblages by TWINSPAN analysis separated northern assemblages from southern assemblages along the 70 m depth contour. Assemblages were further separated by the 30, 50 m and 100 m depth contour as well as by the sediment type. In addition to widely distributed species, cold water species do not occur further south than the northern edge of the Dogger Bank, which corresponds to the 50 m depth contour. Warm water species were not found north of the 100 m depth contour. Some species occur on all types of sediment but most are restricted to a special sediment and therefore these species are limited in their distribution. The factors structuring species distributions and assemblages seem to be temperature, the influence of different water masses, e.g. Atlantic water, the type of sediment and the food supply to the benthos.

Abundance and biomass of in- and epibenthic invertebrate macrofauna in the German Bight from 1969 to 2000

In order to examine the long-term development of offshore macrozoobenthic soft-bottom communities of the German Bight, four representative permanent stations (MZB-SSd, -FSd, -Slt, -WB) have been sampled continuously since 1969. Inter-annual variability and possible long-term trends were analysed based on spring-time samples from 1969 until 2000. This is part of the ecological long-term series of the AWI and is supplemented by periodic large-scale mapping of the benthos. The main factors influencing the development of the benthic communities are biological interactions, climate, food supply (eutrophication) and the disturbance regime. The most frequent disturbances are sediment relocations during strong storms or by bottom trawling, while occasional oxygen deficiencies and extremely cold winters are important disturbance events working on a much larger scale. Benthic communities at the sampling stations show a large inter-annual variability combined with a variation on a roughly decadal scale. In accordance with large-scale system shifts reported for the North Sea, benthic community transitions occurred between roughly the 1970ies, 80ies and 90ies. The transitions between periods are not distinctly marked by strong changes but rather reflected in gradual changes of the species composition and dominance structure.

Ostracoda in five sediment cores from the Laptev and Kara seas

Fossil ostracods were investigated in five AMS14C-dated cores from different parts of the Laptev and Kara seas. Three cores from the Laptev Sea shelf are located in river paleovalleys, and one core originates from the western continental slope. The core from the Kara Sea was obtained in the eastern shelf region. Six fossil assemblages were distinguished: estuarine (1), inner-shelf (2), middle-shelf (3), outer-shelf (4), Pre-Holocene upper continental slope (5), and Holocene upper continental slope (6). They show that during the Postglacial sea-level rise there was a transition from estuarine brackish-water environment to modern marine conditions. Assemblages 1-3 are present in the eastern Laptev Sea with the oldest ostracod-bearing samples aging back to 11.4-11.3 cal.ka. Cores from the western Laptev Sea (12.3 cal.ka, assemblages 1-4) and the Kara Sea (8.1 cal.ka, assemblages 2-4) demonstrate similar pattern in assemblage replacement, but contain a number of relatively deep-water species reflecting stronger influence of open-sea waters. Core from the continental slope, water depth 270 m (~ 17 cal.ka) encompasses assemblages 5 and 6, which are absent in the shelf cores. Assemblage 5 stands out as a specific community dominated by relatively deep-water Arctic and North Atlantic species together with euryhaline ones. The assemblages indicate inflows of Atlantic-derived waters and downslope slides due to the proximity to the paleocoastline. Assemblage (6) is similar to the modern local ostracod assemblage at this site.

Ostracodes in bottom sediments of the Laptev Sea

This work is the first detailed description of the Late Pleistocene-Holocene and Recent Ostracoda of the Laptev Sea. A total of 45 species in 22 genera and 13 families have been identified. All these species are described monographically. Three different ecological assemblages of ostracodes corresponding to different combinations of environmental parameters have been established; they are restricted to three regions of the sea: western-central, eastern, and southern. The recent ostracode assemblages of the Laptev Sea have been compared with those from other Arctic areas and are most similar to those of the Beaufort and Kara seas. Data on recent Ostracoda are used for paleoenvironmental reconstructions on the eastern shelf and western continental slope of the Laptev Sea. For this purpose, ostracodes from five sections obtained from these parts of the sea have been examined. The oldest sediments, which are of Late Pleistocene age (15.8 cal. ka BP), have been recovered in a core from the western continental slope. These yielded five ostracode assemblages, which correspond to different paleoenvironments and replaced each other in the course of the rapid postglacial sea-level rise, thus showing variations in the Atlantic water inflow from the west and freshwater discharge from the subaerially exposed shelf. On the outer shelf of the eastern part of the sea, the rapid sea-level rise in the Early Holocene (lowermost dating 11.3 cal. ka BP) led to a rapid transition from assemblages of brackish-water nearshore environments to those of modernlike normal marine environments; modern environments were established about 8.2 cal. ka ago. Since core sections from the inner shelf correspond to the time when the level of the sea had already reached its modern values, changes in taxonomic composition of ostracode assemblages primarily mirror variations in river runoff.