Detection of K-ras exon 1 mutations by constant denaturant capillary electrophoresis

Among various mutation detection methods, constant denaturant capillary electrophoresis (CDCE) is one of the most common techniques for rapid identification of known or unknown mutations. In this report, a CDCE analysis method with homemade linear polyacrylamide (LPA) kit was developed on ABI 310 genetic analyzer, the effect and relationship of various denaturing factors in CDCE analysis were investigated and K-ras gene mutations of 31 coloerctal cancer patients were detected. Results indicate that, with the increase of chemical danaturant concentration, the optimum temperature was lowered, and when the concentration of urea (formamide) was higher than 7 M (40%), the homoduplex and heteroduplex of mutant samples were separated with difficulty. Detection results of K-ras gene in colorectal samples indicated that mutations were present in eight (26%) of 31 patients; most mutations were localized in codon 12, which is thought to be a critical step and plays an important role in human colorectal carcinogenesisas. Copyright (C) 2004 John Wiley Sons, Ltd.

Applications of homemade kit in mutation detection of genes

Several methods of mutation detection, such as single-strand conformation polymorphism (SSCP), tandem SSCP/heteroduplex analysis and SNaPshot analysis were developed using homemade kit on ABI 310 genetic analyzer, and were successfully applied to mutation detection of 31 colorectal tumor samples. The sieving capability of homemade kit and commercial kit were compared, results demonstrate that homemade kit has higher resolution and shorter analysis time. In clinical tumor samples, 26% K-ras (exon 1) and 24% p53 (exons 7-8) were found to have mutations, and all mutations were single point variations. A majority of mutations occurred in one gene, only 1 tumor contained alterations in the two genes, which indicates that development of colorectal cancer lies on alternate pathways, and may correlate with different gene mutations.

A single-strand conformation polymorphism method by capillary electrophoresis with laser-induced fluorescence for detection of the T1151A mutation in hMLH1 gene

Mutation of hMLH1 gene plays an important role in human tumorigenesis. A highly sensitive single-strand conformation polymorphism (SSCP) method for detection of the T1151A mutation in exon 12 of the hMLH1 gene was for the first time developed employing laser-induced fluorescence capillary electrophoresis (LIF-CE). Effects of the concentration of linear polyacrylamide solution, running temperature, running voltage and the addition of glycerol on SSCP analysis were investigated, and the optimum separation conditions were defined. Thirty colorectal cancer patients and eight lung cancer patients were screened and the T1151A mutation was found in four of them. Based on CE-sequencing the mutation was further confirmed. To our knowledge, this is for the first time that the T1151A mutation is found in lung cancer. Our method is simple, rapid, and highly sensitive and is well suited to the analysis of large numbers of clinical samples.

Simultaneous genotyping of multiplex single nucleotide polymorphisms of the K-ras gene with a home-made kit

Accurate and fast genotyping of single nucleotide polymorphisms (SNPs) is important in the human genome project. Here an automated fluorescent method that can rapidly and accurately genotype multiplex known SNPs was developed by using a homemade kit, which has lower cost but higher resolution than commercial kit. With this method, oncogene K-ras was investigated, four known SNPs of K-ras gene exon 1 in 31 coloerctal cancer patients were detected. Results indicate that mutations were present in 8(26%) of 31 patients, and most mutations were localized in codon 12. The presence of these mutations is thought to be a critical step and plays an important role in human colorectal carcinogenesisas. (C) 2003 Elsevier B.V. All rights reserved.

陕北黄土区生物结皮条件下土壤养分的积累及流失风险

分析了陕北黄土高原典型流域生物结皮的形成和发育对土壤养分的积累效应,同时对生物结皮条件下土壤养分的流失风险进行评价.结果表明:生物结皮生长发育后能够迅速增加结皮层及2cm土层的养分含量,但对深层土壤影响较小;退耕0～20年间结皮层的养分含量与退耕年限之间的关系可用指数函数(y=a[b-exp(-cx)])拟合,其中有机质、全氮和碱解氮在退耕20年间的增加速度变化不大,而全磷、速效磷和速效钾在退耕初期增加迅速,后期增加缓慢;自然发育生物结皮对土壤养分的年均净贡献量为:有机质50.15g.m-2、全氮1.95g.m-2、全磷0.44g.m-2、碱解氮164.33mg.m-2、速效磷9.64mg.m-2和速效钾126.21mg.m-2,人工培育条件下生物结皮发育更快,对养分尤其是速效养分的贡献速率更高;生物结皮条件下养分含量的提高增加了养分流失风险,尤其是养分随泥沙流失大幅度增加,生物结皮增加的养分中平均有39.06%随泥沙流失,仅有60.94%得以保留.总之,生物结皮可迅速、全面增加表层土壤养分,但同时会加大养分流失风险.尽管如此,土壤养分的净增加量仍相当可观,显示生物结皮具有较好的土壤养分积累效应.

20世纪90年代内蒙古自治区土地利用动态与风力侵蚀动态对比研究

内蒙古是我国风力侵蚀较为严重的地区之一,同时也是我国土地利用方式剧烈变化的地区之一。依据两期土地利用数据以及相应年代的土壤风力侵蚀数据,研究了20世纪90年代内蒙古自治区土地利用和风力侵蚀的静、动态格局。根据土地利用和风力侵蚀的空间分布及动态变化特点,设计了内蒙古土地利用—风力侵蚀动态区划,基于该区划详细讨论了内蒙古不同地区占主导地位的土地利用动态与风力侵蚀动态,由此揭示了两者之间存在的驱动——被驱动关系。研究发现,在过去10年里,内蒙古土地利用和风力侵蚀的基本格局没有太大变化,但风力侵蚀在总体上是增强了,而土地利用的变化主要反映为草地的退化和耕地的扩张。土地利用动态与风力侵蚀动态有着良好的时空对应关系草地的退化与耕地的扩张导致了显著的风力侵蚀增强,而草地的改善以及耕地的收缩对风力侵蚀的影响不是很大,这同时也表明了土地利用动态对风力侵蚀动态正、反向驱动力的不平衡性。

千烟洲中亚热带人工林生态系统CO_2通量的季节变异特征

作为中国陆地生态系统通量网络(ChinaFLUX)的组成部分,利用涡度相关技术对千烟洲中亚热带人工林生态系统CO2通量进行了长期观测．本研究集中探讨了千烟洲人工林2003年和2004年净生态系统CO2交换量(NEE)、生态系统呼吸(Re)和总生态系统CO2交换量(GEE)的季节变异特征及其源汇状况与强度．研究结果表明:(i)NEE,Re和GEE具有明显的季节变化趋势且密切相关,冬季和干旱期量级较低而夏季量级较高．(ii)光照、温度和水分条件是控制千烟洲人工林生态系统NEE,Re和GEE季节动态的主导因素．

Bioactive, Luminescent and Mesoporous Europium-doped Hydroxyapatite as a Drug Carrier

Bioactive, luminescent and mesoporous europium-doped hydroxyapatite (Eu:HAp) was successfully prepared through a simple one-step route using cationic surfactant as template. The obtained multifunctional hydroxyapatite was performed as a drug delivery carrier to investigate the drug storage/release properties using ibuprofen (IBU) as a model drug

Fabrication, characterization of spherical CaWO4:Ln@MCM-41(Ln=Eu3+, Dy3+, Sm3+, Er3+) composites and their applications as drug release systems

Spherical MCM-41 particles with a diameter of about 150 nm have been successfully coated with CaWO4:Ln (Ln = Eu3+, Dy3+, Sm3+, Er3+) phosphor layers through a simple Pechini sol-gel process. The obtained CaWO4:Ln@MCM-41 composites, which kept the mesoporous structure of MCM-41 and the luminescent properties of phosphors, were investigated as a drug delivery system using aspirin (ASPL) as a model drug.

Self-assembly of rod-coil-rod ABA-type triblock copolymers

Self-assembled behavior of symmetric ABA rod-coil-rod triblock copolymer melts is studied by applying self-consistent-field lattice techniques in three-dimensional space. The phase diagram is constructed to understand the effects of the chain architecture on the self-assembled behavior. Four stable structures are observed for the ABA rod-coil-rod triblock, i.e., spherelike, lamellar, gyroidlike, and cylindrical structures. Different from AB rod-coil diblock and BAB coil-rod-coil triblock copolymers, the lamellar structure observed in ABA rod-coil-rod triblock copolymer melts is not stable for high volume fraction of the rod component (f(rod)=0.8), which is attributed to the intramolecular interactions between the two rod blocks of the polymer chain.

Self-assembled 3D Architectures of LuBO3 : Eu3+: Phase-selective synthesis, growth mechanism, and tunable luminescent properties

Rhombohedral-calcite and hexagonal-vaterite types of LuBO:Eu3+ microparticles with various complex self-assembled 3D architectures have been prepared selectively by an efficient surfactant- and template-free hydrothermal process for the first time. X-ray diffraction, scanning electron microscopy, energy-dispersive X-ray spectrometry, transmission electron microscopy, high-resolution transmission electron microscopy, selected area electron diffraction, photoluminescence, and cathodoluminescence spectra as well as kinetic decays were used to characterize the samples.

Preparation and Luminescence Properties of YVO4:Ln and Y(V, P)O-4:Ln (Ln = Eu3+, Sm3+, Dy3+) Nanofibers and Microbelts by Sol-Gel/Electrospinning Process

One-dimensional YVO4:Ln and Y(V, P)O-4:Ln nanofibers and quasi-one-dimensional YVO4:Ln microbelts (Ln = Eu3+, Sm3+, Dy3+) have been prepared by a combination method of sol-gel process and electrospinning. X-ray diffraction (XRD), Fourier transform infrared spectroscopy (FT-IR), thermogravimetric and differential thermal analysis (TG-DTA), scanning electron microscopy (SEM), transmission electron microscopy (TEM), high-resolution transmission electron microscopy (HRTEM), photoluminescence (PL), low-voltage cathodoluminescence (CL), and time-resolved emission spectra as well as kinetic decays were used to characterize the resulting samples.

Hydrothermal synthesis of lanthanide fluorides LnF(3) (Ln = La to Lu) nano-/microcrystals with multiform structures and morphologies

Lanthanide fluoride LnF(3) (Ln = La to Lu) nano-/microcrystals with multiform crystal structures (hexagonal and orthorhombic) and morphologies (separated elongated nanoparticles, aggregated nanoparticles, polyhedral microcrystals) were successfully synthesized by a facile, effective, and environmentally friendly hydrothermal method. X-ray diffraction, Fourier transform infrared spectroscopy, scanning electron microscopy, transmission electron microscopy, high-resolution transmission electron microscopy, and photoluminescence spectra were used to characterize the samples. The experimental results indicated that the use of NaBF4 is indispensable for obtaining LnF(3) crystal structures.

Shape controllable synthesis and upconversion properties of NaYbF4/NaYbF4 : Er3+ and YbF3/YbF3 : Er3+ microstructures

Ytterbium fluoride compounds with different crystal phases and morphologies, such as beta-NaYbF4 hexagonal microdisks, microprisms, microtubes, and alpha-NaYbF4 submicrospheres as well as YbF3 octahedra, have been synthesized via a facile hydrothermal route. X-Ray diffraction (XRD), scanning electron microscopy (SEM), transmission electron microscopy (TEM), high-resolution transmission electron microscopy (HRTEM), selected area electron diffraction (SAED) and photoluminescence (PL) spectra were used to characterize the samples.

Energy transfer and tunable luminescence properties of Eu3+ in TbBO3 microspheres via a facile hydrothermal process

Tb(1-x)BO3:xEu(3+) (x = 0-1) microsphere phosphors have been successfully prepared by a simple hydrothermal process directly without further sintering treatment. X-ray diffraction (XRD), Fourier transform infrared spectroscopy (FTIR), thermogravimetric analysis (TGA), scanning electron microscopy (SEM), transmission electron microscopy (TEM), high-resolution transmission electron microscopy (HRTEM), selected area electron diffraction (SAED), photoluminescence (PL), low-voltage cathodoluminescence (CL), and time-resolved emission spectra as well as lifetimes were used to characterize the samples.