Characterization of thirty two microsatellite loci for three Atlanto-Mediterranean echinoderm species

Thirty two microsatellites were optimized from 454 pyrosequencing libraries for three Atlanto-Mediterranean echinoderms: Coscinasterias tenuispina, Echinaster sepositus and Arbacia lixula. We observed different frequency of microsatellite types (di-, tri-, tetra- and pentanucleotide) throughout the genome of the species, but no significant differences were observed in allele richness among different microsatellite repeats. No loci showed linkage disequilibrium. Heterozygosity deficit and departure from Hardy Weinberg equilibrium were observed for some loci, in two species, probably due to high levels of inbreeding. Heterozygosity excess observed in C. tenuispina could be explained by selection against homozygotes and/or outcrossing.

La vegetacio litoral de Torredembarra (sud de Catalunya)

Se estudia la vegetación litoral de Torredembarra desde el punto de vista fitosociológico. Los pequeños terófitos, que crecen en primavera sobre suelo arenoso-arcilloso, son objeto de un estudio especial. Se describe una asociación nueva, el Junco (minutuli)-Parapholidetum filiformis, perteneciente a la clase Saginetea maritimae, y se estudia la fenología de las plantas que la forman. Se publica también un transecto y una catena de la vegetación.

Characterization of thirty two microsatellite loci for three Atlanto-Mediterranean echinoderm species

Thirty two microsatellites were optimized from 454 pyrosequencing libraries for three Atlanto-Mediterranean echinoderms: Coscinasterias tenuispina, Echinaster sepositus and Arbacia lixula. We observed different frequency of microsatellite types (di-, tri-, tetra- and pentanucleotide) throughout the genome of the species, but no significant differences were observed in allele richness among different microsatellite repeats. No loci showed linkage disequilibrium. Heterozygosity deficit and departure from Hardy Weinberg equilibrium were observed for some loci, in two species, probably due to high levels of inbreeding. Heterozygosity excess observed in C. tenuispina could be explained by selection against homozygotes and/or outcrossing.

Biodiversity and ecosystem functioning in angiosperm communities in the Baltic Sea

The biological variation in nature is called biodiversity. Anthropogenic pressures have led to a loss of biodiversity, alarming scientists as to what consequences declining diversity has for ecosystem functioning. The general consensus is that diversity (e.g. species richness or identity) affects functioning and provides services from which humans benefit. The aim of this thesis was to investigate how aquatic plant species richness and identity affect ecosystem functioning in terms of processes such as primary production, nutrient availability, epifaunal colonization and properties e.g. stability of Zostera marina subjected to shading. The main work was carried out in the field and ranged temporally from weeklong to 3.5 months-long experiments. The experimental plants used frequently co-occur in submerged meadows in the northern Baltic Sea and consist of eelgrass (Z. marina), perfoliate pondweed (Potamogeton perfoliatus), sago pondweed (P. pectinatus), slender-leaved pondweed (P. filiformis) and horned pondweed (Zannichellia palustris). The results showed that plant richness affected epifaunal community variables weakly, but had a strong positive effect on infaunal species number and functional diversity, while plant identity had strong effects on amphipods (Gammarus spp.), of which abundances were higher in plant assemblages consisting of P. perfoliatus. Depending on the starting standardizing unit, plant richness showed varying effects on primary production. In shoot density-standardized plots, plant richness increased the shoot densities of three out of four species and enhanced the plant biomass production. Both positive complementarity and selection effects were found to underpin the positive biodiversity effects. In shoot biomass-standardized plots, richness effects only affected biomass production of one species. Negative selection was prevalent, counteracting positive complementarity, which resulted in no significant biodiversity effect. The stability of Z. marina was affected by plant richness in such that Z. marina growing in polycultures lost proportionally less biomass than Z. marina in monocultures and thus had a higher resistance to shading. Monoculture plants in turn gained biomass faster, and thereby had a faster recovery than Z. marina growing in polycultures. These results indicate that positive interspecific interactions occurred during shading, while the faster recovery of monocultures suggests that the change from shading stress to recovery resulted in a shift from positive interactions to resource competition between species. The results derived from this thesis show that plant diversity affects ecosystem functioning and contribute to the growing knowledge of plant diversity being an important component of aquatic ecosystems. Diverse plant communities sustain higher primary productivity than comparable monocultures, affect faunal communities positively and enhance stability. Richness and identity effects vary, and identity has generally stronger effects on more variables than richness. However, species-rich communities are likely to contain several species with differing effects on functions, which renders species richness important for functioning. Mixed meadows add to coastal ecosystem functioning in the northern Baltic Sea and may provide with services essential for human well-being.

Efeitos de dessecantes no controle de plantas daninhas na cultura da soja

Este trabalho teve como objetivo avaliar a eficiência do glyphosate e da mistura comercial paraquat + diuron, bem como o efeito do intervalo entre as aplicações desses herbicidas e a semeadura da soja, sobre o controle e a rebrota de Digitaria insularis, Synedrellopsis grisebachii e Leptochloa filiformis. O experimento foi conduzido em área de soja em sistema de plantio direto, utilizando-se o delineamento de blocos casualizados com nove tratamentos e quatro repetições. Foram avaliados os seguintes tratamentos: glyphosate no dia da semeadura e um, dois e cinco dias antes desta; paraquat + diuron 20 dias antes e no dia da semeadura; glyphosate 10 dias antes da semeadura e paraquat + diuron no dia da semeadura; glyphosate 15 dias antes da semeadura e paraquat + diuron no dia da semeadura; glyphosate 20 dias antes da semeadura e paraquat + diuron no dia da semeadura; e testemunha infestada. Verificou-se controle satisfatório e impedimento de rebrota de D. insularis e L. filiformis quando o glyphosate foi aplicado cinco dias antes da semeadura da soja ou quando foi realizada aplicação seqüencial de glyphosate e paraquat + diuron. Aplicações seqüenciais da mistura comercial de paraquat + diuron não foram eficientes no controle e no impedimento da rebrota de D. insularis e L. filiformis. S. grisebachii mostrou-se tolerante ao glyphosate.

Eficácia de imazethapyr e chlorimuron-ethyl em aplicações de pré-semeadura da cultura da soja

O trabalho teve como objetivo avaliar a ação dos herbicidas imazethapyr e chlorimuron-ethyl em aplicações de pré-semeadura da cultura da soja, visando o controle das plantas daninhas presentes antes da semeadura e a redução na emergência de plantas daninhas durante o ciclo da cultura. O experimento foi conduzido a campo, em área de produção de soja em sistema de plantio direto. O delineamento experimental utilizado foi o de blocos casualizados, com quatro repetições, em esquema fatorial (4 x 4 + 1), sendo quatro tratamentos herbicidas [glyphosate (1,62 kg ha-1); glyphosate (1,62 kg ha-1) + imazethapyr (100 g ha-1); glyphosate (1,62 kg ha-1) + chlorimuron-ethyl (10 g ha-1); glyphosate (1,62 kg ha-1) + chlorimuron-ethyl (20 g ha-1)] e quatro intervalos entre a aplicação dos herbicidas e a semeadura da soja (0, 1, 3 e 7 dias), mais uma testemunha não-dessecada. A adição dos herbicidas imazethapyr (100 g ha¹) e chlorimuron-ethyl (10 ou 20 g ha-1) junto ao glyphosate não melhorou o controle e também não diminuiu a rebrota posterior das plantas daninhas Digitaria insularis, Tridax procumbens e Leptochloa filiformis. Três dias antes da semeadura da soja foi o intervalo mínimo para que o controle dessas três espécies de plantas daninhas não fosse prejudicado pela operação de semeadura mecânica. Constatou-se que os tratamentos herbicidas não afetaram o número de plantas emergidas das espécies Sida santaremnensis, Digitaria insularis, Eleusine indica, Chamaesyce hirta, Bidens pilosa e Senna obtusifolia. Apenas para a espécie Althernantela tenella foi verificado que a adição de imazethapyr ou de chlorimuron-ethyl junto ao glyphosate reduziu a emergência dessa planta daninha na área, mostrando eficiência em pré-emergência. Todos os tratamentos herbicidas aplicados em pré-semeadura proporcionaram maior produtividade da cultura da soja em relação à testemunha não-dessecada, mas o incremento dos herbicidas imazethapyr e chlorimuron-ethyl ao glyphosate não resultou em aumento de produtividade da soja.

Aquatic Hyphomycetes in the Parque Estadual das Fontes do Ipiranga - PEFI, São Paulo, Brazil

In the State Park Parque Estadual das Fontes do Ipiranga - PEFI, located in the city of São Paulo, samples of submerged mixed leaf litter were collected monthly from 10 sites with different levels of eutrophication, from October 2003 to April 2005. Some abiotic factors, such as pH, temperature, conductivity and dissolved oxygen were simultaneously measured in 20 cm deep water at each site. The leaf litter samples were washed in laboratory, cut into 1 cm² pieces and incubated in Petri dishes containing distilled sterile water for five to seven days at 15 °C to 20 °C. Twenty-four aquatic Hyphomycete species were identified, with predominance of Anguillospora crassa Ingold, Lunulospora curvula Ingold, Tetrachaetum elegans Ingold and Camposporium pellucidum (Grove) Hughes. First reports for South America are: Anguillospora filiformis Greathead, Dendrospora erecta Ingold and Pyramidospora casuarinae Nilsson. These species, as well as Tetracladium setigerum (Grove) Ingold, Tricladium splendens Ingold and Varicosporium elodeae Kegel, are reported for the first time in Brazil. According to the multivariate analysis, the occurrence of the aquatic Hyphomycetes was mainly influenced by the trophic level of the aquatic environments.

Morphologie évolutive et fonctionnelle des hémichordés

L’embranchement Hemichordata regroupe les classes Enteropneusta et Pterobranchia. Hemichordata constitue, avec l’embranchement Echinodermata, le groupe-frère des chordés. Les entéropneustes sont des organismes vermiformes solitaires qui vivent sous ou à la surface du substrat et s’alimentent généralement par déposivorie, alors que les ptérobranches sont des organismes coloniaux filtreurs habitant dans un réseau de tubes appelé coenecium. Ce mémoire présente trois études dont le point commun est l’utilisation des hémichordés actuels pour répondre à des questions concernant l’évolution des hémichordés, des chordés, et du super-embranchement qui les regroupe, Deuterostomia. Notre première étude démontre que les fentes pharyngiennes, l’organe pré-oral cilié (POCO) et le pharynx de l’entéropneuste Protoglossus graveolens sont utilisés pour l’alimentation par filtration. Le système de filtration de P. graveolens permet la capture de particules jusqu’à 1.3 um, à un débit de 4.05 mm.s-1, pour une demande énergétique de 0.009 uW. Les similarités structurales et fonctionnelles avec le système de filtration des céphalochordés suggèrent que la filtration pharyngienne est ancestrale aux deutérostomes. Lors de notre deuxième étude, nous avons exploré l’hypothèse selon laquelle le POCO des entéropneustes, une structure ciliée pré-buccale au rôle possiblement chémorécepteur, serait homologue au « wheel organ » des céphalochordés et à l’adénohypophyse des vertébrés. Pour cela, nous avons déterminé par immunohistochimie l’expression de Pit-1, un facteur de transcription spécifique à ces deux structures, chez l’entéropneuste Saccoglossus pusillus. Pit-1 est exprimé dans des cellules sensorielles du POCO, mais aussi dans des cellules épithéliales distribuées dans le proboscis, collet et tronc. Ce patron d’expression ne permet pas de confirmer ou rejeter l’homologie du POCO et de l’adénohypophyse des vertébrés. Lors de notre troisième étude, nous avons caractérisé l’ultrastructure du coenecium des ptérobranches Cephalodiscus hodgsoni, Cephalodiscus nigrescens et Cephalodiscus densus par microscopie électronique à transmisison et à balayage. Cephalodiscus est le groupe frère de Graptolithina, un groupe qui inclut les graptolithes éteints ainsi que les ptérobranches du genre Rhabdopleura. Nous avons décrit les types de fibrilles de collagène présents, leur taille et leur organisation, ainsi que l’organisation globale du coenecium. Nous avons ainsi démontré la présence chez Cephalodiscus d’une organisation similaire au paracortex, pseudocortex et eucortex des graptolithes. La présence chez Cephalodiscus de ce type d’organisation suggère que le cortex est ancestral à la classe Pterobranchia. Ces trois études illustrent plusieurs axes importants de la recherche sur les hémichordés, qui en intégrant des données morphologiques, fonctionnelles et moléculaires permet de reconstruire certains évènements clés de l’évolution des deutérostomes.

Intranuclear crystalloids of Antarctic sea urchins as a biomarker for oil contamination

Because of human actions, biomarkers have become important to detect and mitigate pollution. This study showed that crystalloids can be a biomarker for analyses of low levels of water-soluble fractions of oil (WSF). Antarctic sea urchins (Sterechinus neumayeri) from regions free of pollution were exposed for 2, 5, 10 and 15 days at different levels of WSF (0.4, 0.8 and 1.2 ppm). No significant differences were observed in the phagocytic rates or the germicide capacity for the yeast Saccharomyces cerevisiae; however, there was a significant increase in the quantity of intranuclear iron crystalloids in phagocytic amoebocytes of urchins exposed to higher levels of WSF. This study characterizes histological alterations in crystalloids of S. neumayeri that could be used as a biomarker for oil contaminants, with a simple and inexpensive protocol.

Lipid, fatty acid, protein, amino acid and ash contents in four Brazilian red algae species

Four species of marine benthic algae (Laurencia filiformis, L. intricata, Gracilaria domingensis and G. birdiae) that belong to the phylum Rhodophyta were collected in Espirito Santo State, Brazil and investigated concerning their biochemical composition (fatty acid, total lipid, soluble proteins, amino acid and ash). The total content of lipid (% dry weight) ranged from 1.1% to 6.2%: fatty acid from 0.7% to 1.0%: soluble protein from 4.6% to 18.3%, amino acid from 6.7% to 11.3% and ash from 22.5% to 38.4%. judging from their composition, the four species of algae appear to be potential sources of dietary proteins, amino acids, lipids and essential fatty acids for humans and animals. (C) 2009 Elsevier Ltd. All rights reserved.

Bioecologia da ictiofauna marinha descartada pelo arrasto camaroeiro em praias da Bacia Potiguar, Brasil

The composition of ichthyofauna discarded by trawling shrimping, their reproductive status and feeding ecology were studied on the beaches of Basin Rio Grande do Norte, Brazil. Fish were collected monthly in the year of 2012. During biometrics, portions of the digestive tract and of gonads were removed, fixed in formalin 10% and Bouin, respectively, for be submitted to histological processing by the techniques of hematoxylin-eosin. Stomach content analyzes were performed using the methods of Frequency of Occurrence and Volumetric and was calculated the repletion index. Throughout the study period were recorded a total of 49 species. The fish assemblages differed between sections monitoring, with the highest abundance, biomass and indices of richness and diversity in sections B, D and C. Already the excerpt A, showed higher values for dominance and equitability. In the cluster analysis according to the faunal similarity was observed the formation of three groups: group I formed by excerpts B and D, group II by excerpt C and group III formed by excerpt A. The assessment of reproductive stage revealed that the fish assemblages discarded by trawling are composed mainly of juveniles. Regarding the feeding ecology, the species Larimus breviceps, Menticirrhus littoralis and Pomadasys corvinaeformis characterized as carnivorous with tendency to carcinofagia. Already Conodon nobilis characterized as carnivorous with tendency to piscivory, but all proved generalist-opportunistic with increase of feeding activity during drought. The dendrogram of grouping of the species developed based on the food items used shows the formation of four groups: Group I consists of species that feed mainly of "gastropod" and "sediment"; group II of "teleost fish"; the group III of "crustacea" and group IV of "echinodermata" and "bivalve". The anatomical and histological characteristics of the digestive tract were consistent with the dietary habits of the analyzed species. In this context, the Costa Branca of Rio Grande do Norte can be considered a feeding site and recruitment for juveniles, which, opportunistically, utilize resources associated with the background

Eficácia de imazethapyr e chlorimuron-ethyl em aplicações de pré-semeadura da cultura da soja

O trabalho teve como objetivo avaliar a ação dos herbicidas imazethapyr e chlorimuron-ethyl em aplicações de pré-semeadura da cultura da soja, visando o controle das plantas daninhas presentes antes da semeadura e a redução na emergência de plantas daninhas durante o ciclo da cultura. O experimento foi conduzido a campo, em área de produção de soja em sistema de plantio direto. O delineamento experimental utilizado foi o de blocos casualizados, com quatro repetições, em esquema fatorial (4 x 4 + 1), sendo quatro tratamentos herbicidas [glyphosate (1,62 kg ha-1); glyphosate (1,62 kg ha-1) + imazethapyr (100 g ha-1); glyphosate (1,62 kg ha-1) + chlorimuron-ethyl (10 g ha-1); glyphosate (1,62 kg ha-1) + chlorimuron-ethyl (20 g ha-1)] e quatro intervalos entre a aplicação dos herbicidas e a semeadura da soja (0, 1, 3 e 7 dias), mais uma testemunha não-dessecada. A adição dos herbicidas imazethapyr (100 g ha¹) e chlorimuron-ethyl (10 ou 20 g ha-1) junto ao glyphosate não melhorou o controle e também não diminuiu a rebrota posterior das plantas daninhas Digitaria insularis, Tridax procumbens e Leptochloa filiformis. Três dias antes da semeadura da soja foi o intervalo mínimo para que o controle dessas três espécies de plantas daninhas não fosse prejudicado pela operação de semeadura mecânica. Constatou-se que os tratamentos herbicidas não afetaram o número de plantas emergidas das espécies Sida santaremnensis, Digitaria insularis, Eleusine indica, Chamaesyce hirta, Bidens pilosa e Senna obtusifolia. Apenas para a espécie Althernantela tenella foi verificado que a adição de imazethapyr ou de chlorimuron-ethyl junto ao glyphosate reduziu a emergência dessa planta daninha na área, mostrando eficiência em pré-emergência. Todos os tratamentos herbicidas aplicados em pré-semeadura proporcionaram maior produtividade da cultura da soja em relação à testemunha não-dessecada, mas o incremento dos herbicidas imazethapyr e chlorimuron-ethyl ao glyphosate não resultou em aumento de produtividade da soja.

Invertebrates from the Low Head Member (Polonez Cove Formation, Oligocene) at Vaureal Peak, King George Island, West Antarctica

Eight taxa of marine invertebrates, including two new bivalve species, are described from the Low Head Member of the Polonez Cove Formation (latest early Oligocene) cropping out in the Vaureal Peak area, King George Island, West Antarctica. The fossil assemblage includes representatives of Brachiopoda (genera Neothyris sp. and Liothyrella sp.), Bivalvia (Adamussium auristriatum sp. nov., ?Adamussium cf. A. alanbeui Jonkers, and Limatula (Antarctolima) ferraziana sp. nov.), Bryozoa, Polychaeta (serpulid tubes) and Echinodermata. Specimens occur in debris flows deposits of the Low Head Member, as part of a fan delta setting in a high energy, shallow marine environment. Liothyrella sp., Adamussium auristriatum sp. nov. and Limatula ferraziana sp. nov. are among the oldest records for these genera in King George Island. In spite of their restrict number and diversification, bivalves and brachiopods from this study display an overall dispersal pattern that roughly fits in the clockwise circulation of marine currents around Antarctica accomplished in two steps. The first followed the opening of the Tasmanian Gateway at the Eocene/Oligocene boundary, along the eastern margin of Antarctica, and the second took place in post-Palaeogene time, following the Drake Passage opening between Antarctic Peninsula and South America, along the western margin of Antarctica.

Dermatologia ambiental: Manifestações dermatológicas de acidentes por animais aquáticos (invertebrados)

Contact between humans and coastal areas has increased in recent decades, which has led to an increase in injuries from aquatic animals. The majority of these present dermatological manifestations, and some of them show typical lesions. The highest percentages of injuries that occur in marine environments are associated with invertebrates such as sea urchins, jellyfish and Portuguese men-of-war (echinoderms and cnidarians). In this review, we discuss the clinical, therapeutic and preventive aspects of injuries caused by marine and freshwater invertebrates, focusing on first aid measures and diagnosis for dermatologists and professionals in coastal areas. © 2013 by Anais Brasileiros de Dermatologia.