Characterization of thirty two microsatellite loci for three Atlanto-Mediterranean echinoderm species


Autoria(s): Garcia Cisneros, Alex; Valero Jiménez, Claudio; Palacín Cabañas, Cruz; Pérez Portela, Rocío
Contribuinte(s)

Universitat de Barcelona

Resumo

Thirty two microsatellites were optimized from 454 pyrosequencing libraries for three Atlanto-Mediterranean echinoderms: Coscinasterias tenuispina, Echinaster sepositus and Arbacia lixula. We observed different frequency of microsatellite types (di-, tri-, tetra- and pentanucleotide) throughout the genome of the species, but no significant differences were observed in allele richness among different microsatellite repeats. No loci showed linkage disequilibrium. Heterozygosity deficit and departure from Hardy Weinberg equilibrium were observed for some loci, in two species, probably due to high levels of inbreeding. Heterozygosity excess observed in C. tenuispina could be explained by selection against homozygotes and/or outcrossing.

Identificador

http://hdl.handle.net/2445/45786

Idioma(s)

eng

Publicador

Springer Science + Business Media

Direitos

(c) Springer Science + Business Media, 2013

info:eu-repo/semantics/openAccess

Palavras-Chave #Equinoderms #Mediterrània (Mar) #Echinodermata #Mediterranean Sea
Tipo

info:eu-repo/semantics/article

info:eu-repo/semantics/acceptedVersion