Experimental and computational study of methane and methyl formate pyrolysis and oxidation in a flow reactor

A study of the pyrolysis and oxidation (phi 0.5-1-2) of methane and methyl formate (phi 0.5) in a laboratory flow reactor (Length = 50 cm, inner diameter = 2.5 cm) has been carried out at 1-4 atm and 300-1300 K temperature range. Exhaust gaseous species analysis was realized using a gas chromatographic system, Varian CP-4900 PRO Mirco-GC, with a TCD detector and using helium as carrier for a Molecular Sieve 5Å column and nitrogen for a COX column, whose temperatures and pressures were respectively of 65°C and 150kPa. Model simulations using NTUA [1], Fisher et al. [12], Grana [13] and Dooley [14] kinetic mechanisms have been performed with CHEMKIN. The work provides a basis for further development and optimization of existing detailed chemical kinetic schemes.

Ecological distribution of semi-demersal fishes in space and time on the shelf of Antalya Gulf

In this study we provide a baseline data on semidemersal fish assemblages and biology in a heterogeneous and yet less studied portion of the shelf of Antalya Gulf. The distribution of fish abundance in three transects subjected to different fisheries regulations (fishery vs non fishery areas), and including depths of 10, 25, 75, 125, 200 m, was studied between May 2014 and February 2015 in representative months of winter, spring, summer and autumn seasons. A total of 76 fish species belonging to 40 families was collected and semidemersal species distribution was analyzed in comparison with the whole community. Spatial distribution of fish was driven mainly by depth and two main assemblages were observed: shallow waters (10-25; 75 m) and deep waters (125-200 m). Significant differences among transects were found for the whole community but not for the semidemersal species. Analysis showed that this was due to a strong relation of these species with local environmental characteristics rather than to a different fishing pressure over transects. Firstly all species distribute according to the bathymetrical gradient and secondly to the bottom type structure. Semidemersal species were then found more related to zooplankton and suspended matter availability. The main morphological characteristics, sex and size distribution of the target semidemersal species Spicara smaris (Linnaeus, 1758), Saurida undosquamis (Richardson, 1848), Pagellus acarne (Risso, 1827) were also investigated.

Management impacts on Carex assiniboinensis and Cardamine concatenata on the Ottawa National Forest

Monitoring of herbaceous plants on the Ottawa National Forest (ONF) is used to understand the impact of forest management on understory composition and site conditions. In their planning, national forests are required to take into account management impacts on diversity and ecosystem health. The effect of management on understory species is dependent on various factors, including the intensity of disturbance and the biology of the plant. In the first study in this report, a population of Carex assiniboinensis, a Michigan state threatened species, was monitored for seven seasons including before logging commenced, in order to determine the sedge’s response to a single-tree selection harvest. Analyses provided insights for management of C. assiniboinensis at the stand level over the short-term. In the second study in this report, the use of the cutleaf toothwort (Cardamine concatenata) as a Management Indicator Species on the ONF was reviewed. Data were analyzed to determine the suitability of using C. concatenata to monitor impacts of forest management on site conditions. The various factors that affect understory species population dynamics illuminated the challenges of using indicator species to monitor site conditions. Insights from the study provide a greater understanding of management impacts on understory species across the Ottawa National Forest.

Genetic relationships of Aeromonas strains inferred from 16S rRNA, gyrB and rpoB gene sequences

Genetic relationships among bacterial strains belonging to the genus Aeromonas were inferred from 16S rRNA, gyrB and rpoB gene sequences. Twenty-eight type or collection strains of the recognized species or subspecies and 33 Aeromonas strains isolated from human and animal specimens as well as from environmental samples were included in the study. As reported previously, the 16S rRNA gene sequence is highly conserved within the genus Aeromonas, having only limited resolution for this very tight group of species. Analysis of a 1.1 kb gyrB sequence confirmed that this gene has high resolving power, with maximal interspecies divergence of 15.2 %. Similar results were obtained by sequencing only 517 bp of the rpoB gene, which showed maximal interspecies divergence of 13 %. The topologies of the gyrB- and rpoB-derived trees were similar. The results confirm the close relationship of species within the genus Aeromonas and show that a phylogenetic approach including several genes is suitable for improving the complicated taxonomy of the genus.

Spider Ecophysiology

With over 43,000 species, spiders are the largest predacious arthropod group. They have developed key characteristics such as multi-purpose silk types, venoms consisting of hundreds of components, locomotion driven by muscles and hydraulic pressure, a highly evolved key-lock mechanism between the complex genital structures, and many more unique features. After 300 million years of evolutionary refinement, spiders are present in all land habitats and represent one of the most successful groups of terrestrial organisms. Ecophysiology combines functional and evolutionary aspects of morphology, physiology, biochemistry and molecular biology with ecology. Cutting-edge science in spiders focuses on the circulatory and respiratory system, locomotion and dispersal abilities, the immune system, endosymbionts and pathogens, chemical communication, gland secretions, venom components, silk structure, structure and perception of colours as well as nutritional requirements. Spiders are valuable indicator species in agroecosystems and for conservation biology. Modern transfer and application technologies research spiders and their products with respect to their value for biomimetics, material sciences, and the agrochemical and pharmaceutical industries.

Forest structure and composition of previously selectively logged and non-logged montane forests at Mt. Kilimanjaro

The montane forests of Mount Kilimanjaro in Tanzania have been subjected to a long history of selective logging. However, since 1984 logging of indigenous trees is prohibited. Today, these forests allow us to evaluate the long-term effects of selective logging. We mapped the height and diameter at breast height (DBH) of all trees >10 cm DBH on 10 sites of 0.25 ha. Five sites represent non-logged forests, another five selectively logged forests. We tested whether forests were still visibly affected 30–40 years after selective logging in terms of their forest structure and tree diversity. Additionally we compared tree densities of different species guilds, including disturbance-indicator species, late-successional species and main timber species. Furthermore, we specifically compared the community size distributions of selectively logged and non-logged forests, first across all species and then for the most important timber species, Ocotea usambarensis, alone. 30–40 years after selective logging forests still showed a higher overall stem density, mainly due to higher relative abundances of small trees (<50 cm DBH) in general, and higher densities of small size class stems of late-successional species specifically. For O. usambarensis, the selectively logged sites harboured higher relative abundances of small trees and lower relative abundances of harvestable trees. The higher relative abundance of small O. usambarensis-stems in selectively logged forests appears promising for future forest recovery. Thus, outside protected areas, selective logging may be a sustainable management option if logging cycles are considerably longer than 40 years, enough large source trees remain, and the recruiting O. usambarensis individuals find open space for their establishment.

Long-term hydrological dynamics and fire history over the last 2000 years in CE Europe reconstructed from a high-resolution peat archive

Sphagnum peatlands in the oceanic-continental transition zone of Poland are currently influenced by climatic and anthropogenic factors that lead to peat desiccation and susceptibility to fire. Little is known about the response of Sphagnum peatland testate amoebae (TA) to the combined effects of drought and fire. To understand the relationships between hydrology and fire dynamics, we used high-resolution multi-proxy palaeoecological data to reconstruct 2000 years of mire history in northern Poland. We employed a new approach for Polish peatlands – joint TA-based water table depth and charcoal-inferred fire activity reconstructions. In addition, the response of most abundant TA hydrological indicators to charcoal-inferred fire activity was assessed. The results show four hydrological stages of peatland development: moderately wet (from ∼35 BC to 800 AD), wet (from ∼800 to 1390 AD), dry (from ∼1390 to 1700 AD) and with an instable water table (from ∼1700 to 2012 AD). Fire activity has increased in the last millennium after constant human presence in the mire surroundings. Higher fire activity caused a rise in the water table, but later an abrupt drought appeared at the onset of the Little Ice Age. This dry phase is characterized by high ash contents and high charcoal-inferred fire activity. Fires preceded hydrological change and the response of TA to fire was indirect. Peatland drying and hydrological instability was connected with TA community changes from wet (dominance of Archerella flavum, Hyalosphenia papilio, Amphitrema wrightianum) to dry (dominance of Cryptodifflugia oviformis, Euglypha rotunda); however, no clear fire indicator species was found. Anthropogenic activities can increase peat fires and cause substantial hydrology changes. Our data suggest that increased human fire activity was one of the main factors that influenced peatland hydrology, though the mire response through hydrological changes towards drier conditions was delayed in relation to the surrounding vegetation changes.

Determinación de reducción del crecimiento radical (CE50) por una formulación de glifosato utilizando lechuga y trigo como especies bioindicadoras

El objetivo fue determinar la concentración efectiva media de reducción del crecimiento radical (CE50), de una formulación del herbicida glifosato mediante bioensayos de germinación con semillas de lechuga y de trigo. Para lechuga se probaron 9 dosis/tratamientos decrecientes entre 1.215 y 0,01215 g i.a.ha-1 (formulado: Sal amónica de la N-Fosfonometil glicina, 40,5 [g e.a. glifosato 36,9% p/v]) y para trigo 5 dosis decrecientes (entre 12,15 y 1,215 g i.a.ha-1) y su respectivo control negativo (agua destilada). Se utilizaron cajas de Petri, con papel de filtro en la base humedecido con 3 ml de la solución correspondiente. Se sembraron 20 semillas por caja, distribuyéndose los tratamientos en bloques al azar con 4 repeticiones, en cámara de crecimiento a 20°C con alternancia de luz y oscuridad. Se midió la longitud radicular de todas las semillas de cada tratamiento con calibre digital. Se determinó el porcentaje de germinación y se calculó el índice de germinación. Las CE50, es decir, las dosis que redujeron en un 50% el crecimiento radical para lechuga y trigo, fueron 6,682 y 9,416 g i.a.ha-1, respectivamente. Los materiales probados resultaron sensibles a distintas dosis de glifosato y por lo tanto pueden utilizarse como indicadores biológicos de toxicidad específica.

A late Quaternary planktonic foraminifer faunal record of rapid climatic changes of sediment core GIK17938-2

A high-resolution planktonic foraminifer record from a core recovered from the South China Sea (SCS) (Sonne 17938-2: 19°47.2'N, 117° 32.3E; 2840 m; Delta t c. 250-1000 years) shows rapid millennial-scale changes in the western Pacific marginal sea climate during the last 30,000 years. The SCS is the largest western Pacific marginal sea off the southeast Asian continent, the area today dominated by seasonal monsoon changes. Quantitative analyses of planktonic foraminifer faunal abundance data frorn the core indicate large downcore variations in the relative abundances of the dominant taxa since about 30,000 years ago in the isotope stage 3. Further analyses indicate that the abundance of G. inflata, a good indicator species for cold SST (~13°-19°C) and deep MLD (~100-125 m) waters shows abrupt shifts. During stages 2 and 3, the abundance record of G. infiata tends to be punctuated by quasi-periodie short intervals (~2000-3000 yrs) where its abundance reaches 15% or greater, superimposed on generally low (5-10%) background values. This pattern suggests an instability of surface ocean conditions of the SCS during the past 30,000 years. The abrupt abundance changes of G. infiata correlate well with similar climatic changes observed from a GISP2 ice core 8180, and North Atlantic core DSDP 609 N. pachyderma (s.) and lithic grain abundances during 'Heinrich evcnts'. These results suggest that the millennial-scale variability of climate is not peculiar to the Atlantic region. Apparently, the rapid SCS climatic changes during Heinrich events are driven by effective mechanisms, of particularly the effects of shifts in the latitudinal position of the Siberia High Pressure System.

The hydropolyp fauna of the Red Sea area

46 hydropolyp species of 28 genera and 10 families were sampled during the "Meteor" passage 1964/65 (IIOE) through the Red Sea and its northern and southern exits and on the occasion of several ecological investigations of 29 selected coral reef sections of the central Red Sea and the Gulf of Aqaba. These collections comprise 128 single records of hydropolyp species. Three species and two genera each with one species are doubtful. 25 species, seven genera, one family and one subfamily, together from 49 records have not previously been found in the Red Sea and its exits. Including these newly reported species, the total list increases from 64 species and 112 records to 89 species and 240 single records and 51 additional ones. Scanning microscopical photos, made for the first time for the illustration of the hydropolyps, have been shown to be suitable for a better characterization and diagnosis of the species. Qualified results on the reasons for the horizontal distribution of the species known from the Red Sea area cannot be given because of the low number of samples sporadically distributed through the whole area. In contrast with this fact, the vertical spread of the species sampled seems primarily to be regulated by water exchange and light intensity. For example, four species of hydropolyps are excellent indicators of certain abiotic factors or combinations of them: Gymnangium eximium reacts extremely stenophote-photophobe-rheophil, Eudendrium ramosum moderately stenophote-photophobe-rheophobe, Lytocarpus philippinus moderately stenophote-photophil-rheophil, and Halocordyle disticha var. australis extremely stenophote-photophil but moderately rheophil. Other species have been found throughout all the light zones. Combined with the small size of their colonies their euryphotic behaviour does not allow their use as indicator species.

Stable isotope record and distribution of foraminifera in sediment core GeoB3004-1

Fluctuations in the abundance of selected foraminiferal indicator species and diversity allowed the reconstruction of changes in deepwater oxygenation and monsoon-driven organic matter fluxes in the deep western Arabian Sea during the last 190 kyr. Times of maximum surface production coincide with periods of intensified SW monsoon as shown by the abundance of Globigerina bulloides and enhanced carbonate corrosion. Benthic ecosystem variability in the deep Arabian Sea is not exclusively driven by variations in monsoonal upwelling and related organic matter supply to the seafloor but also by changes in deepwater ventilation. Deepening of the base of the oxygen minimum zone (OMZ) below 1800 m water depth is strongly coherent on the precessional band but lags proxies of SW monsoon strength by 4 to 6 kyr. The "out-of-phase" relationship between OMZ deepening and maximum SW monsoon strength is explained by temporal changes in the advection of oxygen-rich deepwater masses of North Atlantic and Antarctic origin. This process affected the remineralization and burial efficiency of organic matter in the deep Arabian Sea, resulting in the observed phase lag between maximum monsoon strength and organic carbon preservation.

Diatoms in Paleocene sediments of the southwestern South Atlantic

The taxonomy and stratigraphy of pelagic Paleocene diatoms from ODP Sites 698, 700, and 702 and DSDP Site 524 in the South Atlantic and DSDP Site 214 in the Indian Ocean are presented, as well as paleogeographic and paleoecologic implications. Eleven new species and one new variety are described and one new combination is proposed: Coscinodiscus cruxii sp. nov. Grunowiella palaeocaenica var. alternans var. nov. Hemiaulusl beatus sp. nov. Hemiaulusl ciesielskii sp. nov. Hemiaulusl conicus sp. nov. Hemiaulus kristoffersenii sp. nov. Hemiaulus nocchiae sp. nov. Hemiaulusl oonkii sp. nov. Hemiaulusl velatus sp. nov. Triceratium gombosii sp. nov. Trochosira gracillima comb. nov. Trochosira marginata sp. nov. Trochosira radiata sp. nov. Hole 700B provides one of the most continuous diatomaceous Paleocene profiles known. Stratigraphic ranges of diatom species from this and other Southern Hemisphere sites are calibrated against calcareous microfossil zones. The first-appearance datums of Triceratium gombosii, Hemiaulus incurvus, and Triceratium mirabile in Paleocene deep-sea sediments are useful for regional stratigraphic correlations. Quantitative analysis of the biosiliceous microfossil groups (diatoms, silicoflagellates, radiolarians, and archaeomonadaceae) shows that preservation of diatoms is confined primarily to the upper Paleocene (planktonic foraminifer Zones P3 and P4 and calcareous nannofossil Zones upper NP5 to lower NP9). In the lower Paleocene only short intervals in Hole 700B are diatomaceous. A correlation between the degree of silica diagenesis and the calcium carbonate content of the sediment is not obvious. Diatom species analysis reflects changes in the paleoenvironment between island-related upwelling conditions with highly diverse and well-preserved diatom assemblages and less productive periods resulting in less wellpreserved diatom assemblages with a higher content of robust neritic diatoms.

Oligocene and Neogene radiolarians from the Labrador Sea

Two sites in the Labrador Sea and one site in Baffin Bay were drilled during Leg 105. Radiolarians were recovered at all three sites, although at Site 645 (Baffin Bay), radiolarians were present in useful numbers only in the mudline sample. Radiolarians of late Neogene age were recovered at Site 646 south of Greenland, while early Oligocene and early Miocene radiolarians were recovered from the Labrador Sea at Site 647. In Site 646, radiolarian and other coarse-fraction abundances vary dramatically from sample to sample and may reflect deep-water depositional processes as well as changes in surface-water conditions. Site 647 siliceous microfossils reach their peak abundance and preservation in Core 105-647A-25R and decline gradually upward into the lower Miocene (Cores 105-647A-13R and -14R). Siliceous microfossil abundances in counts of the > 38-µm Carbonate-free coarse fraction from the siliceous interval are correlated to each other, but not to the abundance of nonbiogenic coarse-fraction components. Radiolarian abundances in specimens per gram (but not diatom abundances) are correlated to bulk opal concentration and to the organic carbon content of the sediment. The abundance of radiolarians and other siliceous microfossils within the lower Oligocene to lower Miocene is interpreted as reflecting changes in surface-water productivity. With only a few exceptions, no stratigraphic indicator species were seen in samples from either Site 646 or Site 647. The absence of both tropical/subtropical and Norwegian-Greenland Sea stratigraphic forms is due to the dominance of subarctic North Atlantic taxa in Leg 105 assemblages. The early Oligocene and early Miocene assemblages recovered at Site 647 are of particular interest, as very little material of these ages has previously been recovered from the subarctic North Atlantic region, and virtually no descriptive work has been conducted on the more endemic components of the radiolarian assemblages from these time intervals. Thus, this report concentrates on providing, at least in part, the first comprehensive documentation of early Oligocene and early Miocene radiolarians from the subarctic North Atlantic, with emphasis on basic descriptions, measurements, and photographic documentation. However, synonymic work and formal designation of new species names has been deferred until additional material from other regions can be examined. The sole exception is the emendation of Theocalyptra tetracantha Bjorklund and Kellogg 1972 to Cycladophora tetracantha n. comb.

Tintinnids of the western Arabian Sea

The results of an investigation of tintinnids from the western Arabian Sea are described. A total of 134 closing-net samples was obtained from 22 stations of the German "Meteor" expedition 1964/1965. Distribution charts of the dominant species of tintinnids from the study area are presented as well as a list of the world-wide distribution of these species as derived from the literature. Tintinnids were most abundant in the surface waters. The layer from 0 - 25 m yielded a maximum 94.3% and a minimum of 61.3% of the tintinnids present from 0 - 175 m; the mean was 80%. There was no significant difference in the vertical distribution between day and night stations nor was there any indication of the influence of the thermocline upon vertical distribution of tintinnids. TS-diagrams show different water types in the western Arabian Sea. Temperatur-salinity-tintinnid -diagrams indicate regional patterns in the distribution of various species of tintinnids. Some tintinnids can be used as indicator species: Climacocylis scalaria, Parundella lohmanni and Amphorella amphora were typical for the Somali Current whereas Rhabdonella apophysata and Branditella palliata indicated the presence of East African Coastal Current water. The concentration of tintinnids in the upper 25 m raged between 4,800 and 39,300 individuals/m**3 (mean 19,000/m**3). Plasma volume of tintinnids was calculated to permit comparison of different links in the food chain. There was a mean of 51 mm**3/m**2 in the upper layer, equivalent to a concentration of 2 mm**3/m**3. Carbon values were computed from the plasma volume of tintinnids, phytoplankton and larger zooplankton. The ratio of phytoplankton plus microzooplankton carbon to large zooplankton carbon was 1 : 0.8 in the Somali Current, 1 : 0.4 in the East African Coastal Current and 1 : 1.2 in the mixing zone of these current systems. Tintinnids are one of the first links in the food chain. It is very likely that a part of the organic detritus and of the nanoplankton is transfered to large herbivores or omnivores via tintinnids and other protozoans. This mechanism might be especially effective during seasons when large phytoplankters are not available in the ocean.