Nucleotide variation and recombination along the fourth chromosome in Drosophila simulans

The fourth chromosome of Drosophila melanogaster and its sister species are believed to be nonrecombining and have been a model system for testing predictions of the effects of selection on linked, neutral variation. We recently examined nucleotide variat

Sex chromosomes in the black muntjac recapitulate incipient evolution of mammalian sex chromosomes

Background: The regular mammalian X and Y chromosomes diverged from each other at least 166 to 148 million years ago, leaving few traces of their early evolution, including degeneration of the Y chromosome and evolution of dosage compensation. Results: We

Study of physicochemical, microbial and sensory properties of surimi produced from black mouth croaker (Atrobucca nibe) at freezing condition (-18ºC)

Black mouth croaker (Atrobucca nibe) is considered as a new valuable fish stock in the Oman Sea. In this study, surimi was manufactured from nonmarket size of the fish, manually and different cryoprotectant agents were added to the surimi. Finally changes in physiochemical, microbiological and sensory quality, characteristics of the surimi and kamaboko gel samples were assessed during 6 months at freezing storage (-18ºC). Surimi samples with the addition of Iranian tragacanth gum (TG), xanthan gum (XG), chitosan (CS) and whey protein concentrate (WPC) at 1% (w/w) were prepared to evaluate their impacts as a cryoprotectant on the surimi, individually. The results showed that the whiteness and lightness indexes in all surimi samples were gradually decreased during frozen storage. This trend of decreasing was more intensity in the control sample from 61.08±0.131 to 54.21±0.067 was recorded (p<0.05). Water holding capacity (WHC) in all treatments was decreased during 6 months. The lowest WHC (g/g) was obtained in the surimi without cryoprotectants and maximum WHC was measured in Tcs and Twpc samples, respectively (p<0.05). The lowest breaking force was calculated in Txg (166.00±22.627 g) and Tc (271.50±263.16 g) during 6 months at frozen storage, respectively (p<0.05), while Twpc treatment with slight variations showed the highest breaking force (p<0.05). Also, the lowest gel strength was obtained in Txg (68.22±6.740 g.cm) after 6 month of frozen storage (p<0.05). All Kamaboko surimi gels texture profile analysis parameters decreaced with increasing shelf life. This decreasing trend in the control sample was more severe. Floding results were reduced in all samples during storage (p<0.05). The best protective results probably were obtained in WPC, chitosan and commercial cryoprotectant agents, respectively due to protein stabilization of myofibrillar proteins and the protein-protein network structure, leading to the formation of surimi gel with strong textural properties during frozen conditions. The average number of surimi polygonal structures were significantly decreased (number per mm2) and their area were significantly increased (μm2) in all treatments (p<0.05). With increasing storage time, moisture, protein contents and pH were decreaced. Maximun TVB-N index was calculated in Tc (7.93±0.400 mg/100g) and Txg (7.88±0.477), respectively (p<0.05). TBRAs index was increased in all treatments during frozen storage, while this trend was reached in maximum value in Tc (p<0.05). Sensory evaluation of the fish finger quality characteristics (color, odor, texture and overall acceptability) preapare from frozen black mouth croaker surimi was decreaced during 6 month frozen storage. After the period of frozen storage the highest quality scores were measured in Twpc, Tcs and Tcc samples, respectively (p<0.05). In this study, coliform bacteria were not found in all treatments during frozen storage. The surimi sample containing chitosan showed lower mesophilic and psychrotropic bacteria (log cfu/g) than other treatments during frozen storage (p<0.05). Salt-soluble proteins extractions of all treatments were decreased during frozen storage. This decreacing trend was highest in Tcs (45.74±0.176%) and lowest in Tc treatments after 6 month of frozen storage (29.92±0.224%) (p<0.05). Although commercial cryoprotectant agents were successful in limiting the denaturation of proteins but sugar contents were not accepted for diabetics or those who disagree with the sweet taste and high calorie food. Hence, commercial cryoprotectant agents can be replaced with whey protein concentrate and chitosan at 1% level (w/w) consider that they were showed proper protection of the surimi myofibrillar proteins during storage.

不同渗透压的稀释液对猕猴精子低温冷冻保存的影响

以稀释液TTE (382 mOsm/ kg) 为对照, 研究了5 种渗透压(688 、389 、329 、166 、43 mOsm/ kg) 的TEST 稀释液(TEST、mTEST1、mTEST2、mTEST3、mTEST4) 在冷冻过程中对猕猴精子功能的影响。精液一 步稀释于含甘油的防冻液中, 甘油的终浓度为5 % (v/ v) 。在冷冻前后分别检测精子的运动度和质膜完整性, 后者用Hoechst 33342 和碘化丙锭双色标记流式细胞术分析。结果表明: 冷冻之前, 与鲜精相比, 用TEST 和 mTEST4 稀释的精子运动度和质膜完整性显著降低( P < 01001) , 其余组中除mTEST2 稀释的精子质膜完整性显 著降低( P < 0105) 外, 精子运动度无差异; 冷冻复苏后, TTE、mTEST3 和mTEST1 冻存精子的运动度和质膜 完整性最高, 其次是mTEST2 , TEST和mTEST4 冷冻效果最差( P < 0105) 。提示等渗、适当高渗或低渗的稀释 液适合猕猴精子的冷冻保存; 对精子产生高渗毒害作用是导致猕猴精子用TEST 冷冻存活率低的主要原因。

中国澜沧江(鱼芒)科鱼类种群现状及洄游原因分析

我国曾经记录有(鱼芒)科鱼类4种.国际上近年来对(鱼芒)科鱼类的分类进行了许多重要的修订,物种数量已达3属22种.我国的(鱼芒)科鱼类也因长时间没有进行及时的分类修订而存在许多疑问.基于国内自1960年以来所收集的珍贵标本和记录,确认我国记录有(鱼芒)科鱼类1属3种.它们是:长丝(鱼芒)(Pangasius sanitwongsei Smith)、贾巴(鱼芒)(Pangasius djambal Bleeker)、短须(鱼芒)(Pangasius micronemus Bleeker).在此基础上,根据掌握的资料对我国(鱼芒)科鱼类的种群现状和濒危原因、洄游的性质及洄游群体数量下降原因以及水电站建设对大型洄游鱼类的影响进行了分析.以往记录显示,捕获时间都集中于4-5月份,无冬季捕获记录.捕获季节与(鱼芒)科鱼类产卵繁殖季节高度吻合,提示其上溯到我国澜沧江下游应属生殖洄游,而不是索饵洄游.被捕获记录主要出现于20世纪60-70年代,之后则数量锐减.导致这种情况发生的主要原因可能有三方面:1)下游湄公河对(鱼芒)科鱼类的捕捞压力过大;2)湄公河-澜沧江航运船只对(鱼芒)科鱼类有损害作用;3)由于西南季风变化的影响,澜沧江径流量发生变化,可能间接导致(鱼芒)科鱼类洄游行为发生改变.分析显示,(鱼芒)科鱼类的洄游与3-4月份澜沧江流量呈密切相关规律,提示适合鱼类产卵的雨季及西南夏季风比往年较早到达该地区,从而激发它们较往年提前启动生殖洄游,并且溯河的高度较高.以往的捕获记录还表明,(鱼芒)科鱼类主要洄游至景洪下方的澜沧江河段及支流补远江,上述水域是其喜好的产卵场之一.景洪大桥以下的干支流不适合建设水电站,因为电站大坝必然会阻断(鱼芒)科鱼类的繁殖洄游,影响其繁殖活动.而景洪大桥上方的干流电站不在(鱼芒)科鱼类正常繁殖洄游通道中,大坝阻隔作用对(鱼芒)科鱼类的影响相对较小.建议把补远江建设成为鱼类和水生生物保护区.

卵黄萤荧光素再生酶基因的克隆与序列分析

目的 克隆和分析荧光素再生酶基因(LRE).方法 通过GeneBank中已知的荧光素再生酶基因保守区段设计引物,利用5'RACE(rapid-amplification of cDNA ends)和3'RACE技术克隆了来自云南省两双版纳州的卵黄萤(Luciola ovalis)荧光素再生酶基因cDNA和全基因序列.通过GeneBank、National Center for Bioteclmology Information和ProDom at the ExPASy Server软件和数据库进行序列分析.结果 卵黄萤荧光素再牛酶的cDNA序列和基因序列存在2个不同碱基位点,但是它们编码的荧光素再生酶是相同的.卵黄萤荧光素再生酶基因全长(从起始密码子到终止密码子)为1131 bp,包含5个外显子4个内含子,其cDNA 序列为1008 bp,包含924bp的荧光素酶基因开放阅读框和84 bp的3'UTR序列.卵黄萤荧光素酶基因的开放阅读框编码1个307个氨基酸的蛋白质.它与北美萤火虫(Photinus pyralis)荧光素再生酶在碱基序列和氨基酸序列上分别有61.8%和53.3%的相似性.结论 成功地克隆了荧光素再生酶的cDNA和基因序列,为其在基因工程中的应用奠定了基础.

Studies on distribution, diversity and production of macrobenthic fauna in the Chahbahar Bay

The population density, distribution, diversity and secondry production of macrobenthic fauna of the inner Chahbahar Bay were studied through bi-monthly sampling from April 1995 to March 1996. Samples were collected from water near the bottom and sediment at 14 stations inside the Bay and one reference station located outside at the entrance to the Bay. The environmental parameters Such as temperature, water depth, salinity, pH and dissolved oxygen as well as percentage silt-clay and total organic matter of the sediment were measured. The faunal population density and their distribution is discussed in relation to the environmental changes. results obtained indicated both spatial and temporal heterogeneity in faunal distribution of the Chahbahar Bay. The total of 18 groups of macrofauna were identified in all samples. Amphipods formed the dominant group (21%) followed by polychaetes (19%), gastropods (15.7%) bivalves (10.6%) and all other groups (33.7%). Seasonal changes in faunal density is shown in relation to Indian Ocean southwest monsoon,the result of which indicated lower population density during monsoon (June to September) than that of the premonsoon (February to May) and post monsoon (October to January) periods. The numerical abundance of macrobenthos varied from 10260.m2 before monsoon to 5190 m2 during monsoon season. Three dominant groups of macrofauna including polychaetes, gastropods, and bivalves were identified in all collected samples. Indices of diversity, richness and evenness were calculated for these three dominant groups. The Shannon-Weaver information index was used to describe the spatially and temporally variation in diversity of these three major faunal groups. The results exhibited lower faunal diversity during monsoon period. The annual production of two dominant macrofauna species including a species of bivalve, Nuculana acuta and a species of Cephalochordata, Branchiostoma lanceolatum were measured by using age group determination. Furthermore the mean biomass and total annual production of macrobenthic fauna were estimated for the whole studied area. The potential yield of demersal fishery resources (fish and crustacean) then estimated and worked out to be 15360 tons/year asuming 10% ecological efficiency of hypothetical pyramid from 3rd to 4th marine trophic level. Accordingly the annual exploitable demersal fishery resources for the entire Chahbahar Bay was estimated to be 7600 to 8500 tons/year by taking 50 to 55% of the total estimated potential in to account.

Nutritive value of fish of Lake Tanganyika [part] I: Amino acid composition

The amino acid composition was determined of three economic important fish species of Lake Tanganyika, representing 95% of the tolal catch:Stolothrissa tanganicae Regan, Limnothrissa miodon Boulenger and Luciolates stapersii Boulenger. The analysis of the whole sun dried fish indicate that, compared with Tilapia macrochir, beef and the whole hen's egg, the fish is of a very high nutritive value. The free amino acids in the dried fish count for an average of 11 %, indicating the degree of auteolysis.

The future prospects of the fish stocks of Lake Victoria, Uganda

Experimental trawling during the period 1981/86 and analysis of past commercial catch landings, mainly in the northern portion of Lake Victoria have indicated that the standing stocks and therefore, the estimates of sustainable yields of the most important fish species have unquestionably changed since the 1969/71 comprehensive lake-wide stock assessment survey. Lake Victoria which was originally a multi-species fishery now relies on two introduced species (Lates niloticus and Oreochromis niloticus) and one indigenous cyprinid (Rastrineobola argentea). Most of the traditional fish species, including the once dominant haplochromines, have either declined or disappeared. The catch rates in the experimental trawl catches declined from 797 kg/hr in 1969/71 to 575 kg/hr in 1981 and 166 kg/hr in 1985. The contribution of L. niloticus in the trawl catch increased from 0.9% in 1981 to 95.6% in 1985 while the contribution of the haplochromines decreased from about 91% to about 1% over the same period. The mean size of the individual fish caught (particularly the Nile perch) was also on the decline. Similar trends were also observed in the commercial fishery. However, recent observations in the Lake Kyoga commercial fishery that O. niloticus has now surpassed L.niloticus in importance may create more uncertainty regarding the future trends of the fish stocks of Lake Victoria. Inspite of the above situation, developments to increasingly exploit the fish stocks of the lake for export continue to take place. A number of fish processing and/or handling plants have been established in the Jinja, Kampala and Entebbe areas of the lake. Each of these plants is capable of handling upwards of 10 tons of fish a day, the target fish being L. niloticus and O. niloticus.

A key to the families and genera of freshwater fishes of Tanzania

The purpose of this key is to facilitate rapid and accurate identification, in the field, for fisheries workers. It is therefore based as much as possible on external characters only and an attempt has been made to keep it simple and straight forward. The only real difficulty arises in clearly demarcating the numerous cichlid genera of the great lakes, despite the fact that these have been treated in separate sections for each lake. Moreover, it hasn't been possible to revise the key to the lake Nyasa genera (taken from Jackson, 1961) to any significant extent, my experience with L. Nyasa fishes being limited; also, a few new genera have been or are still in the process of being published and I unfortunately haven't had access to these papers. A short bibliography is appended covering the major publications relevant to the systematics of Tanzania freshwater fishes and the sources from which these keys have been drawn up.

Past and present limnological investigations in Uganda: an overview

The limnological investigations in Uganda freshwaters which were started in the 1920s looked into: the origins, the changing geological and climatic factors which gave rise to the characteristic inland waters; the primary production; the constituent small aquatic organisms and their ecology; and their bordering swamps. Most of them were formed immediately after the formation of the great Western rift valley. Almost all the inland waters in Uganda are typical tropical freshwaters which, because of their relative shallowness, experience rather frequent wind stirrings and therefore nutrient circulation which would make them relatively productive. Many physical, biological and chemical factors come into play to finally determine this. The present investigations continue to bridge the gaps which were left and also to collect the baseline data needed to later manage, monitor and control any possible pollution risks.