Comparative studies on the efficiency of energy transfer of two R-phycoerythrin-C-phycocyanin conjugates constructed from sodium periodate and glutaraldehyde respectively

The C-phycocyanin and the R-phycoerythrin were purified from the blue-green alga Spirulina platensis and red alga Polysiphonia urceolata respectively. Both sodium periodate and glutaraldehyde are effective coupling agents being capable of constructing the R-phycoerythrin-C-phycocyanin conjugate, which was also called phycobiliproteins energy transfer model. The two artificial conjugates constructed with different methods were purified by Sephadex G-200 chromatography respectively. Spectra analysis indicated that energy transfer occurred in the two conjugates. The conjugate with sodium periodate had the higher efficiency of energy transfer than that with glutaraldehyde conjugate.

Effects of temperature, hypoxia, ammonia and nitrate on the bleaching among three coral species

Coral bleaching, which is defined as the loss of colour in corals due to the loss of their symbiotic algae (commonly called zooxanthellae) or pigments or both, is occurring globally at increasing rates, and its harm becomes more and more serious during these two decades. The significance of these bleaching events to the health of coral reef ecosystems is extreme, as bleached corals exhibited high mortality, reduced fecundity and productivity and increased susceptibility to diseases. This decreased coral fitness is easily to lead to reef degradation and ultimately to the breakdown of the coral reef ecosystems. Recently, the reasons leading to coral bleaching are thought to be as follows: too high or too low temperature, excess ultraviolet exposure, heavy metal pollution, cyanide poison and seasonal cycle. To date there has been little knowledge of whether mariculture can result in coral bleaching and which substance has the worst effect on corals. And no research was conducted on the effect of hypoxia on corals. To address these questions, effects of temperature, hypoxia, ammonia and nitrate on bleaching of three coral species were studied through examination of morphology and the measurement of the number of symbiotic algae of three coral species Acropora nobilis, Palythoa sp. and Alveopora verrilliana. Results showed that increase in temperature and decrease in dissolved oxygen could lead to increasing number of symbiotic algae and more serious bleaching. In addition, the concentration of 0.001 mmol/L ammonia or nitrate could increase significantly the expulsion of the symbiotic algae of the three coral species. Except for Acropora nobilis, the numbers of symbiotic algae of other two corals did not significantly increase with the increasing concentration of ammonia and nitrate. Furthermore, different hosts have different stress susceptibilities on coral bleaching.

Characterization of the artificially covalent conjugate of B-phycoerythrin and R-phycocyanin and the phycobilisome from Porphyridium cruentum

B-phycoerythrin (BPE) and R-phycocyanin (RPC) were purified from Porphyridium cruentum by Sephadex G-200 chromatography, then the BPE was attached covalently to the RPC by reacting their amino groups to form the artificially covalent BPE-RPC conjugate in which the excitation energy can transfer from the BPE to the RPC with low efficiency. Meanwhile, the intact phycobilisome (PBS) consisting of BPE, RPC, APC and L-CM was isolated and purified from Porphyridium cruentum, and the purified PBS was found to keep intact if the solution contains sucrose. Comparison of spectroscopic properties between the purified PBS and the BPE-RPC conjugate suggests that the BPE-RPC conjugate is much more stable than the purified PBS. The construction of BPE-RPC conjugate with low efficiency of the excitation energy transfer may be useful for preparing phycobiliprotein probes. (C) 2002 Elsevier Science Ireland Ltd. All rights reserved.

The experimental research of R-phycoerythrin subunits on cancer treatment: A new photosensitizer in PDT

The mouse tumor cell 5180 and human liver carcinoma cell SMC 7721 cells were first treated with R-PE and its subunits (alpha, beta, gamma subunits), then irradiated with Argon laser (496 nm, 28.8 J/cm(2)). Survival rate was measured by MTT method. In order to compare the phototoxicity in normal cells, the mouse marrow cells were treated with photofrin II and beta-subunit, irradiated with 45 J/cm(2) of light; survival rate was also measured by MTT method. The result showed that R-PE subunits had better PDT effect on s180 cells than R-PE and lower phototoxicity in marrow cells than photofrin II Flow cytometric analysis showed that PDT results in a growth inhibition and a G(0)-G(1) cell cycle arrest in SMC 7721 cells. The tumor cells inhibited by PDT in vivo were morphologically observed by TEM, the tumor cell death was daze to the occlusion of tumor blood vessels and inducement of cell programmed death in nuclei. Therefore, with the advantage in special fluorescence activity, loth molecular weight, good light absorbent character and weak phototoxicity, R-PE subunit is art attractive option for improving the selectivity of PDT.

Isolation and purification of phycoerythrin from red alga Garcilaria verrucosa by expanded-bed-adsorption and ion-exchange chromatogaphy

R-phycoerythrin was isolated and purified from Gracilaria verrucosa on an expanded-bed adsorption column combined with ion-exchange chromatography, which can effectively solve the problem of blockage of chromatographic columns due to polysaccharides during isolation and purification of phycobiliproteins. 0.1 M (NH4)(2)SO4 proved best to elute R-phycoerythrin from the expanded-bed column, and desalted 0.1 M (NH4)(2)SO4 eluate was used on an ion-exchange column to purify the R-phycoerythrin. Using this two-stage chromatography, the purity (OD565/OD280) of the R-phycoerythrin from G. verrucosa is increased to 4.4, and the yield of purified R-phycoerythrin can reach 0.141 mg . g(-1) of the frozen alga.

Large-scale isolation and purification of R-phycoerythrin from red alga Palmaria palmata using the expanded bed adsorption method

R-phycoerythrin, a light-harvesting protein in some marine algae, and can be widely used in medicine, was isolated and purified from a red alga, Palmaria palmata (Lannaeus) Kuntze, using the streamline column (expanded bed adsorption) combined with ion-exchange chromatography. Because the crude extract was applied to the column upwardly, the column would not be blocked by polysaccharides usually very abundant in the extract of marine alga, this kind of blockage could hardly lie overcome in ordinary chromatographic column. After applying the crude extract containing 0.5 mol/L (NH4)(2)SO4, (NH4)(2)SO4 solution of different concentrations (0.2 mol/L, 0.1 mol/L and 0.05 mol/L) was used to elute the column downwardly and the eluates were collected and desalted. The desalted eluates were then applied onto all ion-exchange chromatographic column loaded with Q-sepharose for further purification of the R-phycoerythrin. Through these two steps, the purity (OD565/OD280) of the R-phycoerythrin from P. palmata was up to 3.5, more than 3.2, the commonly accepted criterion for purity, and the yield of the purified R-phycoerythrin could reach 0.122 mg/g of frozen P. palmata, much higher than that of phycobiliproteins purified with the previous methods. The result indicated that the cost of R-phycoerythrin will drop down with the method reported in this article.

White spot syndrome virus (WSSV) infects specific hemocytes of the shrimp Penaeus merguiensis

White spot syndrome virus (WSSV) was specifically detected by PCR in Penaeus merguiensis hemocytes, hemolymph and plasma. This suggested a close association between the shrimp hemolymph and the virus. Three types of hemocyte from shrimp were isolated using flow cytometry. Dynamic changes of the hemocyte subpopulations in P. merguiensis at different times after infection were observed, indicating that the WSSV infection selectively affected specific subpopulations. Immunofluorescence assay (IFA) and a Wright-Giemsa double staining study of hemocyte types further confirmed the cellular localization of the virus in the infected hemocytes. Electron microscopy revealed virus particles in both vacuoles and the nucleus of the semigranular cells (SGC), as well as in the vacuoles of the granular cells (GC). However, no virus could be detected in the hyaline cells (HC). Our results suggest that the virus infects 2 types of shrimp hemocytes-GCs and SGCs. The SGC type contains higher virus loads and exhibits faster infection rates, and is apparently more susceptible to WSSV infection.

An acidic polysaccharide with xylose branches from Porphyra yezoensis

An acidic polysaccharide (PY3) was isolated from the hot water extract of the red algae Porphyra yezoensis by successive column chromatographies over DEAE-cellulose and Sephadex G-200. PY3 with an average molecular weight of 1.8x10(5) was demonstrated to be composed of galactose (Gal), 3,6-anhydrogalactose (3,6-AnGal), 6-OSO3-galactose (6-OSO3-Gal) and xylose (Xyl) in an approximate molar ratio of 25 : 15, 10, 1. In view of Smith degradation and methylation and on the basis of spectral evidence including those of IR, GC, GC-MS, and H-1 and C-13 NMR, the most probable repeating unit of PY3 could be proposed as [(1-->3)beta -D-Gal(1 --> 4)alpha -L-3,6-AnGal](3)-[(1 --> 3)beta -D-Gal(1 --> 4)alpha -L-6-OSO3-Gal](2) with a xylose moiety at the C-6 of one of every twenty-five beta -D-Gal residues. To our knowledge, PY3 was shown to be the first porphyran possessing occasional xylose branches.

Spectroscopic properties of the C-phycocyanin-allophycocyanin conjugate and the isolated phycobilisomes from Spirulina platensis

C-phycocyanin (CPC) and allophycocyanin (APC) were purified from Spirulina platensis, then the CPC was attached covalently to the APC by reacting their epsilon-amino groups. The excitation energy could be transferred from the CPC to the APC in the CPC-APC conjugate. Intact phycobilisomes (PBS), consisting of CPC, APC, colourless linker polypeptides, and APC B or L-cm, were isolated from S. platensis. Spectroscopic properties of the isolated PBSs kept at 20 degrees C for various times showed that the connection between the APC and the APC B or L-cm was looser than that between the CPC and the APC in the isolated PBSs. The CPC-APC conjugate was more stable than the isolated PBSs, and the linker polypeptides had a minor influence on the excitation energy transfer characteristic between different phycobiliproteins in the PBS.

Sequence analysis of Arthrospira maxima based on fosmid library

Arthrospira (Spirulina) (Setchell& Gardner) is an important cyanobacterium not only in its nutritional potential but in its special biological characteristics. An unbiased fosmid library of Arthrospira maxima FACHB438 that contains 4300 clones was constructed. The size distribution of insert fragments is from 15.5 to 48.9 kb and the average size is 37.6 kb. The recombination frequency is 100%. Therefore the library is 29.9 equivalents to the Arthrospira genome size of 5.4 Mb. A total of 719 sample clones were randomly chosen from the library and 602 available sequences, which consisted of 307,547 bases, covering 5.70% of the whole genome. The codon usage of A. maxima was not strongly biased. GC content at the first position of codons (46.9%) was higher than the second (39.8%) and the third (45.5%) positions. GC content of the genome was 43.6%. Of these sequences, 287 (47.7%) showed high similarities to known genes, 63 (10.5%) to hypothetical genes and the remaining 252 (41.8%) had no significant similarities. The assigned genes were classified into 22 categories with respect to different biological roles. Remarkably, the high presence of 25 sequences (4.2%) encoding reverse transcriptase indicates the RT gene may have multiple copies in the A. maxima genome and might play an important role in the evolutionary history and metabolic regulation. In addition, the sequences encoding the ATP-binding cassette transport system and the two-component signal transduction system were the second and third most frequent genes, respectively. These genomic features provide some clues as to the mechanisms by which this organism adapts to the high concentration of bicarbonate and to the high pH environment.

Growth of Gracilaria lemaneiformis under different cultivation conditions and its effects on nutrient removal in Chinese coastal waters

Gracilaria lemaneiformis (Bory) Daws has been extensively cultivated as a source of commercial agar and the ecomaterials in Shenao Bay, Guangdong Province, Jiaozhou Bay, Shandong Province and other waters in China. This paper examines the in situ suspended farming of G. lemaneiformis using raft cultivation under different conditions and its effects on nutrient removal in the laboratory. The results showed that cultivated Gracilaria grew well in both Shenao Bay and Jiaozhou Bay. The biomass of Gracilaria increased from 50 to 775 g m(-1) (fresh weight) during 28 days, with special growth rate (SPG) 13.9% d(-1) under horizontal cultivation in Jiaozhou Bay. Light, temperature, nutrient supply, as well as cultivation treatments such as initial density, and depth of suspension seaweed were important to the growth of Gracilaria. The highest biomass production was observed in the horizontal culture condition (0.0 m) and 0.5-1.5 m deep layer in Jiaozhou Bay. However, the highest growth rate in Shenao Bay appeared under the lowest initial stocking density treatment. In the laboratory, the aquarium experiments (fish and seaweed culture systems) demonstrated that Gracilaria was able to remove inorganic nutrients effectively. The concentration of NH4+-N decreased by 85.53% and 69.45%, and the concentration of PO4-P decreased 65.97% and 26.74% in aquaria with Gracilaria after 23 days and 40 days, respectively. The results indicate that Gracilaria has the potential to remove excess nutrient from coastal areas, and the large-scale cultivation of G. lemaneiformis could be effective to control eutrophication in Chinese coastal waters. (c) 2005 Elsevier B.V. All rights reserved.

Formation and early development of tetraspores of Gracilaria lemaneiformis (Gracilaria, Gracilariaceae) under laboratory conditions

Morphological and culture studies of tetraspores of Gracilaria lemaneiformis were carried out under laboratory conditions. Relationships of germination rate, diameter and survival rate of tetraspores from 1st generation branches with grads of temperature and irradiance were determined, respectively. The result showed that 1st generation branches is in the majority of the tetraspores shedding and tetraspores from which had highest survival rates than other parts of the sporophytic plant. The time tetraspores used developing from giant unicells to diads, which both existed on the epidermis, then to tetraspores off the matrix, was only approximately 3 weeks all through. However, tetraspores spent more than two months developing into germlings of gametophytes. It was shown that temperature variation (10, 15, 25, 30 degrees C) with the light of 30 mu mol m(-2) s(-1) had significant effects on the germination rate and diameter, but had no apparent effect on survival rate (ANOVA, P < 0.01). Germination rates of tetraspores reached the maximum at 20 degrees C, which was significantly higher than those at other temperature levels (P < 0.01), whereas 15 degrees C seemed to be optimal temperature for the diameter. All the three growth parameters (germination rate, diameter and survival rate) yield highly significant variations with irradiance treatments at room temperature (ANOVA, P < 0.01). The optimal germination rate was detected at the irradiance of 30 mu mol m(-2) s(-1) (P < 0.01). The photon flux density which exceeds 480 nnol m(-2) s(-1) have apparently negative effect on diameter and survival rate. (c) 2005 Elsevier B.V. All rights reserved.

东黄海海洋蓝细菌（Svnechococcus）生态学研究

该文对中国黄海和东海的蓝细菌在春、秋两季的生态分布特点进行了研究和比较,对黄海蓝细胞从10月至次年6月的生态分布进行了研究.1.东黄海海区：在秋季（2000年10月19日至11月29日）和春季（2001年3月26日至4月24日）两个季节中蓝细菌丰度在0.19～7.84×10<'4>cell/ml之间,生物量在0.56～13.74μgC/L之间,整体水平上春季比秋季高（蓝细菌的丰充与生物量平均值春季分析为4.83×10<'4>cell/ml和7.25μgC/L;秋季分别为1.72×10<'4>cell/ml和5.07μgC/L）,东海比黄海高（蓝细菌生物量平均值春季黄海和东海分别为4.42μgC/L和5.52μgC/L;秋季黄海和东海分别为7.02μgC/L和7.45μgC/L）.2.黄海海区：黄海蓝细菌丰度与生物量随时间变化趋势为10月至12月降低（蓝细菌丰度分别为15×10<'4>cell/ml和1.19×10<'4>cell/ml,生物量分别为4.41μgC/L和3.49×10<'4>cell/ml）,4月（蓝细菌丰度与生物量分别为4.68×10<'4>cell/ml和7.02μgC/L）与12月相比有明显增高,蓝细菌丰度4月是12月的3.93倍,生物量4月是12月的2.01倍,4月至6月蓝细菌生物量大致稳定,略有增加（5月和6月蓝细菌丰度分别为5.23×10<'4>cell/ml和5.25×10<'4>cell/ml,生物量分别为7.85μgC/L和7.88μgC/L）.研究发现蓝细菌在水体中的垂直分布与温度变化比较一致.

潮间带纤毛虫原生动物和小型底栖动物生态学研究

微型和小型底栖动物是底栖微/小食物网的重要构成。相对浮游生态系统, 迄今国际间对底栖食物网的认知极为欠缺。这一方面是由于微型生物形态和功能上的复杂性和多样性, 另一方面原因在于研究方法的障碍—主要是微型和小型底栖动物的定量提取和定性分析。本研究首先进行了方法学改良, 并应用新方法对底栖微食物网的重要功能类群—纤毛虫原生动物和小型底栖动物进行了不同生境的周年按月采样, 定性及定量研究的同时, 联系环境因子对微型和小型底栖生物的环境监测进行了探讨。 微型和小型底栖生物的定量研究首先涉及到目标生物在沉积物中的有效提取, 目前硅胶液提取是普遍使用的方法, 其中Ludox液主要应用于小型生物, 它不但价格便宜而且比重合适, 因此在常规生态研究中被广为接受。不过, Ludox易与于海水中的阳离子产生凝结而无法直接用于微型生物; 目前唯一直接应用于微型生物提取的是Percoll硅胶液, 但其昂贵的价格使其在常规生态研究中受到极大限制。本研究以价格低廉的Ludox 硅胶液结合定量蛋白银染色 (QPS) 技术开发了一种新的方法, 即Ludox-QPS法。主要流程为: 样品采集与固定、淘洗/稀释降盐、Ludox密度梯度离心、过滤浓缩和琼脂包埋, QPS染色、永久封片及鉴定计数。添加已知数量的纤毛虫至无生物底泥的重获实验表明, 该密度梯度离心的提取率大于94%; 该方法对自然沉积物中纤毛虫的提取率达97.6%, 对沙质、泥沙质和泥质中海洋线虫的提取率分别达97%、96.9% 和97.8%。对比实验表明, 经QPS制片获得的小型动物的丰度和类群数量与传统方法相当或更高, 尤其当小个体虫体占优势时, 该法显示出较传统方法 (导致数量低估) 更为明显的定量优越性。该方法除用于纤毛虫和小型动物的定量分析外, 还具有较高的分类分辨率, 染色后的纤毛虫原生动物大多类群可鉴定到属, 部分可鉴定到种, 以此可在群落水平上研究其生态作用。 根据新开发的Ludox-QPS技术, 在大沽河潮间带依据盐度梯度选定2个站位 (IIQ和营海) 进行了周年按月采样, 对底栖纤毛虫和小型底栖动物进行了定量研究。纤毛虫原生动物在IIQ和营海的年平均丰度分别为2236 inds./10 cm2 和935 inds./10 cm2 (28 inds./ml 和12 inds./ml), 平均生物量分别为119.1 gC/10 cm2和54.2 gC/10 cm2 (1.5 gC /ml 0.7 gC/ml)。丰度的季节变化趋势为: 春天 > 秋天 > 夏天 > 冬天。垂直分布上, 在营海分布于表层0-0.5 cm 的比例为57.1%, 分布于0.5-2 cm、2-4 cm和4-8 cm比例分别为23.1%、11.4% 和8.5%; 13个月中除12月份外, 4-8 cm均有一定数量的纤毛虫分布; 而在IIQ, 97% 的纤毛虫分布在0-0.5 cm, 分布在0.5-2 cm、2-4 cm和4-8 cm比例分别为2.4%、0.4%和0.2%, 4-8 cm的分布只发生在春季和秋季。纤毛虫的多样性季节变化明显, 春秋季物种丰富, 两个站点每毫升沉积物的平均物种数分别为18和6。Two-Way Crossed ANOSIM 分析表明纤毛虫群落在月份间和站点间的差异极其显著。Pseudochilodonopsis sp., Chilodontopsis sp., Euplotes sp.及Prorodon sp.是表征两个生镜中纤毛虫群落的主要类群。 同时, 发现了14个小型生物类群, 其中线虫在IIQ和营海的丰度优势度分别为97.4% 和78.6%。小型动物在IIQ和营海的年平均丰度分别为4793 inds./10 cm2和8915 inds./10 cm2 (60 inds./ml和111 inds./ml), 其生物量分别为1068.8 gC /10 cm2和1790 gC /10 cm2 (13.4 gC/ml和22.4 gC/ml)。小型底栖动物的丰度在IIQ的季节变化为: 夏季 (7888 inds./10cm2) > 秋季 (5447 inds./10cm2) > 春季 (3731 inds./10cm2) > 冬季 (2780 inds./10cm2); 在营海则完全相反: 冬季 (15579 inds./10cm2) > 春季 (10691 inds./10cm2) > 秋季 (6611 inds./10cm2) > 夏季 (4667 inds./10cm2)。小型底栖动物和纤毛虫的相对重要性存在明显的区域和季节差异。 纤毛虫原生动物、小型动物及环境因子的相关分析表明, 纤毛虫的丰度和多样性与温度和盐度及有机质含量显著相关, 与小型动物没有显著相关性; 群落结构分析表明, 温度、有机质和小型动物的丰度的组合与纤毛虫群落丰度的相关系数为0.345; 盐度、脱镁叶绿素、有机质和小型动物生物量的组合与纤毛虫群落多样性的相关系数为0.403。依据海洋线虫和桡足类的比值 (N/C) 推测, IIQ 可能存在严重的有机污染, 营海则存在明显的季节波动, 8月和9月及2月可能是污染最严重的季节, 这种状况在纤毛虫群落结构的CLUSTER聚类中得到验证。虽然目前尚没有形成有关微型底栖生物-纤毛虫原生动物的污染检测的直接依据, 但本研究说明纤毛虫群落的确对环境污染具有一定的感应度, 而且这种感应和利用小型生物的主要类群估算的污染检测 (N/C) 存在一定程度的关联。 90年代早期有关青岛湾有机污染带的研究表明, 经彻底截污后, 其环境状况向良性发展。进一步了解该湾的健康状况, 2006.5-2007.5月对该湾沙质和泥沙质的小型动物进行周年按月采样。小型动物在泥沙质和砂质沉积物中的年平均丰度分别为4853 ± 1292 inds./10 cm2和1528 ± 569 inds./10 cm2; 年平均总生物量分别为1434.1 ± 897.0 gC /10cm2和720.7 ± 353.8 gC/10cm2。沙质底小型生物的丰度季节波动明显, 6月份和12月份最高, 3月份和9月份最低; 泥沙质季节波动不明显, 6月份最高。两个站点均有48%的小型动物分布在0-0.5 cm 表层, 海洋线虫在表层的分布比例分别为48% (泥沙质) 和34% (砂质)。共检获14个小型动物类群, 其中线虫在泥沙质和砂质沉积物中的年平均丰度分别4619 ± 1255 inds./10cm2和1014 ± 376 inds./10cm2, 其丰度优势度分别为95.2%和66.4%。其它在丰度上占优势的类群, 泥沙质依次为多毛类 (1.5%)、甲壳幼体 (1.5%) 和桡足类 (0.7%); 沙质依次为: 甲壳类幼体 (12.6%)、腹毛类 (8.3%) 和 桡足类 (6.2%)。CLUSTER聚类分析表明, 泥沙质和和砂质中小型生物的丰度组成具有64%的相似性。BIOENV分析表明, 温度、盐度、中值粒径和粘土粉砂含量的组合最能解释不同月份之间和不同站位间的差异, 其相关系数为0.614。依据小型生物的丰度和类群组成, 表明泥沙质底尚存一定的有机污染。