Phytoplankton composition and biomass during leg 7 of Galathea 3 cruise across the southern Indian Ocean

Phytoplankton composition and biomass was investigated across the southern Indian Ocean. Phytoplankton composition was determined from pigment analysis with subsequent calculations of group contributions to total chlorophyll a (Chl a) using CHEMTAX and, in addition, by examination in the microscope. The different plankton communities detected reflected the different water masses along a transect from Cape Town, South Africa, to Broome, Australia. The first station was influenced by the Agulhas Current with a very deep mixed surface layer. Based on pigment analysis this station was dominated by haptophytes, pelagophytes, cyanobacteria, and prasinophytes. Sub-Antarctic waters of the Southern Ocean were encountered at the next station, where new nutrients were intruded to the surface layer and the total Chl a concentration reached high concentrations of 1.7 µg Chl a/L with increased proportions of diatoms and dinoflagellates. The third station was also influenced by Southern Ocean waters, but located in a transition area on the boundary to subtropical water. Prochlorophytes appeared in the samples and Chl a was low, i.e., 0.3 µg/L in the surface with prevalence of haptophytes, pelagophytes, and cyanobacteria. The next two stations were located in the subtropical gyre with little mixing and general oligotrophic conditions where prochlorophytes, haptophytes and pelagophytes dominated. The last two stations were located in tropical waters influenced by down-welling of the Leeuwin Current and particularly prochlorophytes dominated at these two stations, but also pelagophytes, haptophytes and cyanobacteria were abundant. Haptophytes Type 6 (sensu Zapata et al., 2004), most likely Emiliania huxleyi, and pelagophytes were the dominating eucaryotes in the southern Indian Ocean. Prochlorophytes dominated in the subtrophic and oligotrophic eastern Indian Ocean where Chl a was low, i.e., 0.043-0.086 µg total Chl a/L in the surface, and up to 0.4 µg Chl a/L at deep Chl a maximum. From the pigment analyses it was found that the dinoflagellates of unknown trophy enumerated in the microscope at the oligotrophic stations were possibly heterotrophic or mixotrophic. Presence of zeaxanthin containing heterotrophic bacteria may have increased the abundance of cyanobacteria determined by CHEMTAX.

Major and trace elements and interelement ratios at DSDP Leg 81 Holes

Fifty-two samples of basalt from the four holes drilled on the Leg 81 transect across the Rockall margin were analyzed by X-ray fluorescence for Rb, Sr, Y, Zr, and Nb. On the basis of these results 13 samples were chosen for major and supplementary trace-element analysis. The results show no progressive change in the character of the volcanism, from Hole 555 in the continental domain through Holes 552 and 553A in the dipping reflector sequence to Hole 554A on the outer high. Two distinct magma types are present, apparently reflecting heterogeneity of the underlying mantle, but both types are present in both Holes 553A and 555, while Hole 552 and Hole 554 are each composed of a single type. Both magma types have a clear ocean-floor basalt signature when examined by discrimination diagrams, as does the basalt from Deep Sea Drilling Project Site 112, which formed at the same time as the Leg 81 basalts slightly farther south along the spreading center. In contrast, the basalts of East Greenland, formed at the same time, are more enriched in incompatible elements and have a within-plate geochemical signature, as is found in some basalts of Iceland today. Clearly the present distinction in geochemistry between the basalts of Iceland and those erupting well south on the Reykjanes Ridge was already established when continental splitting took place.

Magnesium/calcium ratio of the foraminifera Oridorsalis umbonatus in surface sediment samples off Namibia

A laser ablation system connected to an inductively coupled plasma mass spectrometer was used to determine Mg/Ca ratios of the benthic foraminifera Oridorsalis umbonatus. A set of modern core top samples collected along a depth transect on the continental slope off Namibia (320-2300 m water depth; 2.9° to 10.4°C) was used to calibrate the Mg/Ca ratio against bottom water temperature. The resulting Mg/Ca-bottom water temperature relationship of O. umbonatus is described by the exponential equation Mg/Ca = 1.528*e**0.09*BWT. The temperature sensitivity of this equation is similar to previously published calibrations based on Cibicidoides species, suggesting that the Mg/Ca ratio of O. umbonatus is a valuable proxy for thermocline and deep water temperature.

Physicochemical parameters of water sample the four coastal lagoons at the Peninsula of Yucatan

Study sites. Samples of surface water were taken from 4 coastal lagoons on the Yucatan Peninsula in Mexico: Celestun (20° 45' N - 90° 22' W), Chelem (21° 15' N - 89° 45' W), Rosada Lagoon (21º 19' N - 89º 19' W), and Sabancuy Estuary (18° 58' N - 91° 12' W). The sampling was performed from august to October of 2011 (Chelem 08/24; Laguna Rosada 09/06; Celestún 09/28; Sabancuy 10/25). The sampling was random without replacement and 10 samples of surface water were collected along a transect parallel to the coastal axis. Samples were deposited in sterile plastic bottles and conserved in refrigeration at 4°C. All samples were processed within 24 hours after sampling. According to the Mexican laws and regulations no permissions are required to obtain water and sediment samples from open public areas. Analysis of environmental and physicochemical parameters. Determinations of the environmental parameters were performed with a Hach 5465000 model 156 multi-parameter measuring instrument. The Lorenzen method was used to determine chlorophyll-a (21) with 90% acetone and the concentration was calculated according to the formula: Chla= 27.63 (OD665o - OD665a)(VA)/VM x L Where, OD665o: absorbance at 665 nm before acidification; OD665a: absorbance at 665 nm after acidification; VA: volume (ml) of acetone for extraction; VM: volume (ml) of filtered water; L: length (cm) of the photometric cell. Determinations of the physicochemical parameters (silicates, phosphates, nitrates, nitrites and ammonia) were performed using the spectrophotometric techniques described and modified by Strickland and Parsons (1972).

Geochemical composition and atomic formulas of saponites, celadonites and clays from ODP Leg 168 sites

A drilling transect across the sedimented eastern flank of the Juan de Fuca Ridge, conducted during Leg 168 of the Ocean Drilling Program, resulted in the recovery of samples of volcanic basement rocks (pillow basalts, massive basalts, and volcanic glass breccias) that exhibit the effects of low-temperature hydrothermal alteration. Secondary clays are ubiquitous, with Mg-rich and Fe-rich saponite and celadonitic clays commonly accounting for several percent, and up to 10%-20% by volume. Present-day temperatures of the basement sites vary from 15° to 64°C, with the coolest site being about 0.8 Ma, and the warmest site being about 3.5 Ma. Whereas clays are abundant at sites that have been heated to present temperatures of 23°C and higher, the youngest site at 15°C has only a small trace of secondary clay alteration. Alteration increases as temperatures increase and as the volcanic basement ages. The chemical compositions of secondary clays were determined by electron microprobe, and additional trace element data were determined by both conventional nebulization inductively coupled plasma-mass spectroscopy (ICP-MS) and laser-ablation ICP-MS. Trioctahedral saponite and pyrite are characteristic of the interior of altered rock pieces, forming under conditions of low-oxygen fugacity. Dioctahedral celadonite-like clays along with iron oxyhydroxide and Mg-saponite are characteristic of oxidized haloes surrounding the nonoxidized rock interiors. Chemical compositions of the clays are very similar to those determined from other deep-sea basalts altered at low temperature. The variable Mg:Fe of saponite appears to be a systematic function both of the Mg:Fe of the host rock and the oxidation state during water-rock interaction.

Carbonate and terrigenous content and chemical composition of sediments in the Central Equatorial Pacific

This study addresses changes in the absolute magnitude and spatial geometry of particle flux and export production in a meridional transect across the central equatorial Pacific Ocean's upwelling system during oxygen isotope Stage 11 and Stage 12 and compares these time periods to the current Holocene interglacial system. Temporal and spatial variability in several chemical proxies of export production, and in particular the distributions of Ba, scavenged Al, and P, are studied in a suite of sediment cores gathered along a cross-equator transect at 5°S, 2°S, 0°, 2°N, and 4°N. Because this latitudinal range preserves strong gradients in biogenic particle flux in the modern equatorial Pacific Ocean, we are able to assess variations in the relative magnitude of export production as well as the meridional width of the equatorial system through the late Quaternary glacial/interglacial cycles. During interglacial oxygen isotope Stage 11 the chemical proxies each indicate lower particle flux and export production than during Stage 12. These records are consistent throughout the transect during this time period, but geographic narrowing (during the interglacial) and widening (during the glacial) of the meridional gradient also occurs. Although carbonate concentration varies dramatically through glacial/interglacial cycles at all latitudes studied, the productivity proxies record only minimal glacial/interglacial change at 5°S and 4°N, indicating that the carbonate minima at these latitudes is controlled dominantly by dissolution rather than production. The chemical data indicate that although the spatial geometry of the system during Stages 11 and 12 indicates maximum productivity at the equator during both glacial and interglacial conditions, the absolute magnitude of export production integrated from 5°S to 4°N during Stage 11 was 25-50% less than during Stage 12, and also was 25-50% less than it is now.

Multi-temporal mapping of seagrass cover, species and biomass of the Eastern Banks, Moreton Bay, Australia, with links to shapefiles

The spatial and temporal dynamics of seagrasses have been studied from the leaf to patch (100 m**2) scales. However, landscape scale (> 100 km**2) seagrass population dynamics are unresolved in seagrass ecology. Previous remote sensing approaches have lacked the temporal or spatial resolution, or ecologically appropriate mapping, to fully address this issue. This paper presents a robust, semi-automated object-based image analysis approach for mapping dominant seagrass species, percentage cover and above ground biomass using a time series of field data and coincident high spatial resolution satellite imagery. The study area was a 142 km**2 shallow, clear water seagrass habitat (the Eastern Banks, Moreton Bay, Australia). Nine data sets acquired between 2004 and 2013 were used to create seagrass species and percentage cover maps through the integration of seagrass photo transect field data, and atmospherically and geometrically corrected high spatial resolution satellite image data (WorldView-2, IKONOS and Quickbird-2) using an object based image analysis approach. Biomass maps were derived using empirical models trained with in-situ above ground biomass data per seagrass species. Maps and summary plots identified inter- and intra-annual variation of seagrass species composition, percentage cover level and above ground biomass. The methods provide a rigorous approach for field and image data collection and pre-processing, a semi-automated approach to extract seagrass species and cover maps and assess accuracy, and the subsequent empirical modelling of seagrass biomass. The resultant maps provide a fundamental data set for understanding landscape scale seagrass dynamics in a shallow water environment. Our findings provide proof of concept for the use of time-series analysis of remotely sensed seagrass products for use in seagrass ecology and management.

Neogene benthic foraminifers from the Kerguelen Plateau

Benthic foraminifers were studied quantitatively in 120 lower Miocene through upper Pleistocene samples from Ocean Drilling Program Site 747 (Central Kerguelen Plateau) and Sites 748 and 751 (Southern Kerguelen Plateau). These sites are situated on an 450-km-long, north-south transect between 54°49'S and 58°26'S at present water depths between 1696 and 1288 m. Principal component analysis on the census data of the most abundant 92 taxa helped to identify 8 benthic foraminifer assemblages. These benthic foraminifer assemblages were compared with Holocene faunas from southern high latitudes to reconstruct paleoenvironmental conditions. Middle lower Miocene sediments are characterized by a Uvigerina hispidocostata assemblage, indicating high paleoproductivity and/or not well-ventilated bottom water. From late early to late middle Miocene time, the Southern Kerguelen Plateau was bathed by a young, well-oxygenated, and carbonate-aggressive water mass, as indicated by a Nuttallides umbonifer-dominated benthic foraminifer assemblage. During late middle Miocene time, an Astrononion pusillum assemblage took over for only about 1 m.y., probably indicating the first injection of an aged water mass, similar to the North Atlantic Deep Water (NADW), into a developing circumpolar current system. Around the middle to late Miocene boundary, the fauna again became dominated by N. umbonifer. After the last appearance of N. umbonifer, reestablishment of the A. pusillum assemblage from the early late through at least the late late Miocene, indicated the established influence of a NADW-like water mass. The latest Miocene through middle late Pliocene benthic foraminifer assemblage was characterized by Epistominella exigua and strong carbonate dissolution, indicating very high biosiliceous production, and this in turn may indicate the formation and paleoposition of an Antarctic Polar Frontal Zone. From the late late Pliocene, a Trifarina angulosa assemblage (indicative today of sandy substrate and vigorous bottom currents) strongly dominated the fauna up to the late Pleistocene, when Bulimina aculeata (indicative today of calm sedimentation with high organic matter fluxes) became an important and partly dominating constituent of the fauna. This is interpreted as the faunal response to the decreased winnowing force (bottom current velocities) of the Antarctic Circumpolar Current during periods of global climatic amelioration and raised sea level.

Predominance of heavily calcified coccolithophores at low CaCO3 saturation during winter in the Bay of Biscay

Coccolithophores are an important component of the Earth system, and, as calcifiers, their possible susceptibility to ocean acidification is of major concern. Laboratory studies at enhanced pCO2 levels have produced divergent results without overall consensus. However, it has been predicted from these studies that, although calcification may not be depressed in all species, acidification will produce "a transition in dominance from more to less heavily calcified coccolithophores" [Ridgwell A, et al., (2009) Biogeosciences 6:2611-2623]. A recent observational study [Beaufort L, et al., (2011) Nature 476:80-83] also suggested that coccolithophores are less calcified in more acidic conditions. We present the results of a large observational study of coccolithophore morphology in the Bay of Biscay. Samples were collected once a month for over a year, along a 1,000-km-long transect. Our data clearly show that there is a pronounced seasonality in the morphotypes of Emiliania huxleyi, the most abundant coccolithophore species. Whereas pH and CaCO3 saturation are lowest in winter, the E. huxleyi population shifts from <10% (summer) to >90% (winter) of the heavily calcified form. However, it is unlikely that the shifts in carbonate chemistry alone caused the morphotype shift. Our finding that the most heavily calcified morphotype dominates when conditions are most acidic is contrary to the earlier predictions and raises further questions about the fate of coccolithophores in a high-CO2 world.

210Pb dates, radiocarbon ages and sedimentation and accumulation rates of sediment cores JM99-1198 and MD99-2297

The magnitude of Late Holocene climatic variations are less significant than those that took place during ice ages and deglaciations. However, detailed knowledge about this period is vital in order to understand and model future climate scenarios both as a result of natural climate variation and the effects of global warming. Oceanic heat flux is important for the sensitive climate regime of northern Europe. Our aim is to connect hydrographical changes, reflected by the dinoflagellates cyst (dinocysts) assemblages in the sediments in the Malangen fjord, to local and regional climatic phases. Previous studies have shown that dinocyst assemblages are influenced by temperature, salinity, and the availability of nutrients (e.g. de Vernal et al. 2005, doi:10.1016/j.quascirev.2004.06.014; de Vernal et al. 2001, doi:10.1002/jqs.659; Grosfjeld et al. this volume; Rochon et al. 2008, doi:10.1016/j.marmicro.2008.04.001; Solignac et al. this volume). Dinoflagellates are mostly unicellular organisms that make up one of the main groups of phytoplankton. They are able to regulate their depth within the photic zone and to concentrate along oceanic fronts, which provide nutrient-enriched waters. The dinoflagellate cysts are the hypnozygotes of dinoflagellates naturally produced during the life cycle. Their wall is composed of a highly resistant organic material, which has a high potential to fossilize. Because dinocysts species are linked to particular abiotic and biotic parameters, the dinocyst assemblages provide information about past surface water conditions. Since each fjord has its own hydrographic setting, it is necessary to establish a firm link between the dinocyst composition of the sediment surface samples and the surface water conditions. Indeed the modern dinocyst distribution in subarctic fjords is little known. Thus, in addition to detailing dinocyst results from two shallow cores, several sediment surface samples located along a transect running from the head to the mouth of the fjord, and extending onto the shelf, are also presented.

Swath sonar bathymetry during POLARSTERN cruise ANT-XV/4 (PS49) with links to multibeam raw data files

Multibeam data were collected without operator supervision on R/V Polarstern cruise ANT-XV/4 along track lines of about 7000 NM total length. Data were achieved during transits and stationary work in the western Weddell Sea, at the Weddell-Scotia Confluence, and on a transect along the Prime Meridian of about 1300 NM length, between 69°S and 47°S. The multibeam sonar system Hydrosweep DS-2 was operated using 59 beams and 90° aperture angle. The quality of data might be reduced during bad weather periods or adverse sea ice conditions. The dataset contains raw data that are not processed and thus may contain errors and blunders in depth and position.

Oxygen and Carbon stable isotope ratios for Site U1334

The Oligocene-Miocene transition (OMT) (~23 Ma) is interpreted as a transient global cooling event, associated with a large-scale Antarctic ice sheet expansion. Here we present a 2.23 Myr long high-resolution (~3 kyr) benthic foraminiferal oxygen and carbon isotope (d18O and d13C) record from Integrated Ocean Drilling Program Site U1334 (eastern equatorial Pacific Ocean), covering the interval from 21.91 to 24.14 Ma. To date, five other high-resolution benthic foraminiferal stable isotope stratigraphies across this time interval have been published, showing a ~1 per mil increase in benthic foraminiferal d18O across the OMT. However, these records are still few and spatially limited and no clear understanding exists of the global versus local imprints. We show that trends and the amplitudes of change are similar at Site U1334 as in other high-resolution stable isotope records, suggesting that these represent global deep water signals. We create a benthic foraminiferal stable isotope stack across the OMT by combining Site U1334 with records from ODP Sites 926, 929, 1090, 1264, and 1218 to best approximate the global signal. We find that isotopic gradients between sites indicate interbasinal and intrabasinal variabilities in deep water masses and, in particular, note an offset between the equatorial Atlantic and the equatorial Pacific, suggesting that a distinct temperature gradient was present during the OMT between these deep water masses at low latitudes. A convergence in the d18O values between infaunal and epifaunal species occurs between 22.8 and 23.2 Ma, associated with the maximum d18O excursion at the OMT, suggesting climatic changes associated with the OMT had an effect on interspecies offsets of benthic foraminifera. Our data indicate a maximum glacioeustatic sea level change of ~50 m across the OMT.