Comportamento biológico "in vitro" de "novas espécies" de Leishmania no Velho Mundo

As leishmanioses são um grupo de doenças causadas pelo parasita protozoário Leishmania sp. Na Bacia mediterrânica, Leishmania infantum, é a principal espécie causadora de leishmaniose visceral, a forma mais severa da doença, sendo L. major um dos agentes etiológicos da leishmaniose cutânea. Apesar de se considerar que estes parasitas têm uma reprodução essencialmente clonal, nos últimos 20 anos tem vindo a ser descrita a recombinação genética entre diferentes estirpes e espécies, com ocorrência de híbridos naturais, quer no Velho quer no Novo Mundo. Recentemente, em Portugal, foram isoladas e identificadas pela primeira vez, estirpes híbridas de L. infantum/L. major. O presente estudo teve como principais objetivos, a pesquisa de “novas espécies” de Leishmania e a análise do comportamento “in vitro” de estirpes parentais e híbridas de L. infantum e L. major. Numa primeira parte do trabalho efetuou-se a cultura e pesquisa de DNA de Leishmania sp., em amostras de sangue medular de 229 cães provenientes de uma região endémica de Portugal, utilizando diferentes marcadores moleculares (kDNA, ITS1 e SSU rRNA) e protocolos de PCR. Não foi encontrado DNA de espécies híbridas, tendo-se no entanto, identificado DNA de Leishmania sp. em 45,85% (105/229) das amostras, incluindo cães sem sinais clínicos. Na segunda parte do trabalho, realizaram-se diversos ensaios “in vitro” com estirpes híbridas naturais L. infantum/L. major e parentais L. infantum e L. major. Em condições normais de crescimento, observou-se um padrão de crescimento distinto para cada estirpe estudada. Em condições de “stress” oxidativo, destacou-se uma diferença significativa entre as duas estirpes híbridas estudadas. Em condições de “stress” nutricional, as estirpes não apresentaram diferenças entre si. Após avaliação da suscetibilidade das estirpes na presença de Anfotericina B, todas se mostraram suscetíveis, com concentrações inibitórias (CI50) entre 0.21 e 1.15 μg/mL. Após infeção em linhas celulares monocíticas, não se verificaram diferenças estatisticamente significativas na taxa e intensidade de infeção das estirpes híbridas em comparação às putativas parentais. Os resultados obtidos, contribuíram para um melhor conhecimento sobre o comportamento biológico destas estirpes híbridas naturais L. infantum/L. major. Estas demonstraram um comportamento “in vitro” intermédio, relativamente às estirpes parentais. Estes resultados poderão servir de base para o desenvolvimento de outros estudos com estas “novas espécies”, nomeadamente estudos de patogenicidade “in vivo” e o papel de biomarcadores de virulência, que permitam um potencial prognóstico da infeção e avaliação do seu risco epidemiológico.

Influence of ageing on the properties of bitumen from asphalt mixtures with recycled concrete aggregates

The reuse of recycled concrete aggregates in new hot-mix asphalt can be a more sustainable method of production, but these mixtures may need a heat treatment before compaction to improve their water sensitivity performance. A direct consequence of this treatment is an increase in the hot-mix asphalt resilient modulus. The aim of this paper is to analyse the effect of ageing on the stiffness of asphalt mixtures with different amounts of recycled concrete aggregates, before and after a heat treatment, which was analysed through the assessment of its bitumen properties. Moreover, this paper also aims to analyse whether the rolling thin-film oven test is able to simulate the ageing effect of the heat treatment. In the laboratory work, a paving grade bitumen B50/70 has been used to produce asphalt mixtures with 0% and 30% recycled concrete aggregates, and the bitumen was later characterised (using penetration, softening point, dynamic viscosity and dynamic shear rheometer tests) in various situations, such as when using virgin bitumen, short-term aged bitumen, aged bitumen after heat treatment (simulated with 4 h of rolling thin-film oven test) and bitumen samples recovered from asphalt mixtures with different production mixes (0% and 30% recycled concrete aggregate) and heat treatment conditions (0 and 4 h of curing time in the oven). Based on the results obtained, it could be concluded that the ageing resulting from the heat treatment is the primary cause of the hot-mix asphalt's increased stiffness, while recycled concrete aggregate content has a small influence. Moreover, it could be concluded that when there is no curing time, the recycled concrete aggregate protects the bitumen against ageing. Additionally, it could be stated that the rolling thin-film test is able to adequately simulate the ageing effect of the heat treatment. Thus, this test is useful for determining the ageing suffered by the bitumen when the recycled concrete aggregate mixture is manufactured using a heat treatment.

Tensile stress–crack width law for steel fibre reinforced self-compacting concrete obtained from indirect (splitting) tensile tests

In this work, the fracture mode I parameters of steel fibre reinforced self-compacting concrete (SFRSCC) were derived from the numerical simulation of indirect splitting tensile tests. The combined experimental and numerical research allowed a comparison between the stress-crack width (σ - w) relationship acquired straightforwardly from direct tensile tests, and the σ - w response derived from inverse analysis of the splitting tensile tests results. For this purpose a comprehensive nonlinear 3D finite element (FE) modeling strategy was developed. A comparison between the experimental results obtained from splitting tensile tests and the corresponding FE simulations confirmed the good accuracy of the proposed strategy to derive the σ – w for these composites. It is concluded that the post-cracking tensile laws obtained from inverse analysis provided a close relationship with the ones obtained from the experimental uniaxial tensile tests.

Relação entre desempenho motor e variáveis antropométricas em crianças e adolescentes de Florianópolis, SC/Brasil

O objetivo foi analisar a relação entre desempenho motor (DM) e variáveis antropométricas de crianças e adolescentes de escolas públicas de Florianópolis. Metodologia: 300 alunos do 3º ao 5º ano e da 4ª a 6ª série do Ensino Fundamental, entre os 8 e 16 anos. Os resultados vão ao encontro à literatura, que indicam correlações negativas entre DM e variáveis antropométricas em crianças e adolescentes.

Combining analytical methodologies for the identification of Aspergillus section Flavi strains isolated from Brazilian agricultural commodities

The use of chemical analysis of microbial components, including proteins, became an important achievement in the 80’s of the last century to the microbial identification. This led a more objective microbial identification scheme, called chemotaxonomy, and the analytical tools used in the field are mainly 1D/2D gel electrophoresis, spectrophotometry, high-performance liquid chromatography, gas chromatography, and combined gas chromatography-mass spectrometry. The Edman degradation reaction was also applied to peptides sequence giving important insights to the microbial identification. The rapid development of these techniques, in association with knowledge generated by DNA sequencing and phylogeny based on rRNA gene and housekeeping genes sequences, boosted the microbial identification to an unparalleled scale. The recent results of mass spectrometry (MS), like Matrix-Assisted Laser Desorption/Ionisation Time-of-Flight (MALDI-TOF), for rapid and reliable microbial identification showed considerable promise. In addition, the technique is rapid, reliable and inexpensive in terms of labour and consumables when compared with other biological techniques. At present, MALDI-TOF MS adds an additional step for polyphasic identification which is essential when there is a paucity of characters or high DNA homologies for delimiting very close related species. The full impact of this approach is now being appreciated when more diverse species are studied in detail and successfully identified. However, even with the best polyphasic system, identification of some taxa remains time-consuming and determining what represents a species remains subjective. The possibilities opened with new and even more robust mass spectrometers combined with sound and reliable databases allow not only the microbial identification based on the proteome fingerprinting but also include de novo specific proteins sequencing as additional step. These approaches are pushing the boundaries in the microbial identification field.

Proteins on microbial identification: past achievements, present state-of-the-art, and future challenges

The use of chemical analysis of microbial components, including proteins, became an important achievement in the 80’s of the last century to the microbial identification. This led a more objective microbial identification scheme, called chemotaxonomy, and the analytical tools used in the field are mainly 1D/2D gel electrophoresis, spectrophotometry, high-performance liquid chromatography, gas chromatography, and combined gas chromatography-mass spectrometry. The Edman degradation reaction was also applied to peptides sequence giving important insights to the microbial identification. The rapid development of these techniques, in association with knowledge generated by DNA sequencing and phylogeny based on rRNA gene and housekeeping genes sequences, boosted the microbial identification to an unparalleled scale. The recent results of mass spectrometry (MS), like Matrix-Assisted Laser Desorption/Ionisation Time-of-Flight (MALDI-TOF), for rapid and reliable microbial identification showed considerable promise. In addition, the technique is rapid, reliable and inexpensive in terms of labour and consumables when compared with other biological techniques. At present, MALDI-TOF MS adds an additional step for polyphasic identification which is essential when there is a paucity of characters or high DNA homologies for delimiting very close related species. The full impact of this approach is now being appreciated when more diverse species are studied in detail and successfully identified. However, even with the best polyphasic system, identification of some taxa remains time-consuming and determining what represents a species remains subjective. The possibilities opened with new and even more robust mass spectrometers combined with sound and reliable databases allow not only the microbial identification based on the proteome fingerprinting but also include de novo specific proteins sequencing as additional step. These approaches are pushing the boundaries in the microbial identification field.

Filamentous fungi in free water and biofilms from Brazilian drinking water systems

In some regions of Brazil, especially where the water is scarce, drinking water is stored in water storage tanks. This practice gives the consumer the guarantee of available water. The water storage conditions such as the exposure to hot weather when the tanks are on rooftops allow the development of microorganisms and microbial biofilms which can deteriorate the water quality and increase the risk to human health [1,2]. This study describes the filamentous fungi (FF) detected in free water and biofilms in drinking water storage tanks in Recife - Pernambuco, Brazil. Five sampling times in triplicate were performed at two distinct points. Colony-forming units (CFU) of FF fungi were determined with 0.45 µm filtration membranes using peptone glucose rose Bengal agar (PGRBA). From the 30 samples analysed a total of 1136 CFU were obtained. The water biofilms were collected from samplers consisting of polyethylene coupons, previously installed in the reservoirs. These coupons were transferred to PGRBA plates and incubated using with the same conditions described for free FF. For the in situ detection of FF in biofilms the Calcofluor White staining technique was used. This procedure demonstrated FF forming biofilms on the surfaces of the coupons. Brazilian legislation does not define limits for FF in drinking water. However considering the potential risk of fungal contamination, the data obtained in this study will contribute to developing future quantitative and qualitative parameters for the presence of fungi in drinking water distribution systems in Brazil. [1] HageskaL, G, Lima, N, Skaar, I. The study of fungi in drinking water. Mycological Research, 113, 2009, 165-172. [2] Skaar I, Hageskal G. Fungi in Drinking Water. In.: Paterson RRM, Lima N. (Eds.) Molecular Biology of Food and Water Borne Mycotoxigenic and Mycotic Fungi. CRC Press, Taylor & Francis Group, Boca Raton, 2015, 597-606.

Potencial fisiológico de diásporos de Tectona grandis L.f. derrubados pelo vento

Nas áreas de produção de sementes de Tectona grandis em Cáceres, MT, ventos fortes podem causar queda precoce de frutos. Diásporos de três lotes de teca, um obtido após a queda natural e os outros dois após queda precoce, foram inicialmente qualificados quanto ao teor de água, massa de mil diásporos, número de diásporos por quilograma, emergência em canteiro e respectivo tempo médio. Essas duas últimas variáveis foram novamente determinadas em intervalos de 50 dias até 331 dias após a colheita com o uso de 200 diásporos divididos em quatro repetições. Para os diásporos de queda natural, a emergência de plântulas e o tempo médio não diferiram nos períodos de análise com média geral de 60,6% e 10,8 dias. Os diásporos dos lotes de colheita precoce apresentaram a emergência inicial de 23,5 e 17,5% e os tempos médios de 19,4 e 22,6 dias, respectivamente. Até 115 dias após a colheita, a emergência aumentou (55,5 e 59,5%) e o tempo médio diminuiu (15,0 e 14,1 dias) e a partir daí ocorreu o inverso. Os diásporos de colheita precoce derrubados pelo vento apresentam maturação e o maior potencial fisiológico aos 115 dias após a colheita. No período de 64 a 269 dias após a colheita, esses diásporos atingem o padrão mínimo estabelecido para a teca e o período entre 115 a 165 dias é o mais adequado para sua utilização.

Conceções de amor desenhadas por crianças de 1.º e 2.º Ciclos de Ensino Básico: Análise de discurso

Tendo como intervenientes estudantes de ensino superior, realizou-se um estudo de carácter qualitativo (Amado & Ferreira, 2013), mais especificamente um estudo de caso (Yin, 2005), cujos objetivos foram definidos de acordo com orientações internacionais para a educação para a sexualidade (WHO, 2010a; UNESCO, 2009), nomeadamente: (1) perceber relacionamentos privilegiados; e (2) identificar conceções de futuros partilhados. Para a recolha de dados solicitou-se às crianças que representassem pares por meio de desenho e que dialogassem sobre a interação e o amor. A amostra foi constituída por 55 crianças com idades compreendidas entre os 5-12 anos, sendo 33 do género feminino e 22 do género masculino. Os dados recolhidos foram tratados com vista à análise de conteúdo e análise de discurso. Entre outros resultados, clarificou-se que os pares desenhados eram em menor número de membros da “família” (7 raparigas e 7 rapazes), nomeadamente, “casados”, “pai e filho”, “primo/as”, “avós” ou “sobrinha-tia”. Noutra categoria enquadraram-se as relações “não familiares” (23 raparigas e 13 rapazes), de “amizade”, “amor” e “paixão”, definidos os pares de “namorados”, exprimindo “carinho” ou estando “apaixonados”. Como conclusões verificaram-se os desejados finais felizes e foram debatidos os significados do amor, tendo as raparigas afirmado que o amor é “muito bom”, podendo ter como sentido “carinho”, “amizade”, “lealdade” ou “paixão”. Assim, quando uma pessoa gosta de outra, o amor “une-as”, é uma “coisa natural”, para duas meninas, mas vive-se o amor, segundo outra, «quando se anda juntos, dando passeios». Pode o amor ser para rapazes «tipo amigos a dar beijinhos na boca», mas são elas a desenhar o beijar. Um outro rapaz também valorizou o ser «mais do que amigo». Por acréscimo, depois dos 12 anos, foi aludido o “saber amar” quando se é “amigo”.

Curry-Howard for sequent calculus at last!

This paper tries to remove what seems to be the remaining stumbling blocks in the way to a full understanding of the Curry-Howard isomorphism for sequent calculus, namely the questions: What do variables in proof terms stand for? What is co-control and a co-continuation? How to define the dual of Parigot's mu-operator so that it is a co-control operator? Answering these questions leads to the interpretation that sequent calculus is a formal vector notation with first-class co-control. But this is just the "internal" interpretation, which has to be developed simultaneously with, and is justified by, an "external" one, offered by natural deduction: the sequent calculus corresponds to a bi-directional, agnostic (w.r.t. the call strategy), computational lambda-calculus. Next, the duality between control and co-control is studied and proved in the context of classical logic, where one discovers that the classical sequent calculus has a distortion towards control, and that sequent calculus is the de Morgan dual of natural deduction.

Fitossociologia de uma Floresta Ombrófila Densa na Amazônia Setentrional, Roraima, Brasil

O presente estudo teve como objetivo caracterizar a composição florística e fitossociológica de uma floresta nativa no município de Caracaraí, Roraima, Brasil. Foram inventariadas todas as árvores com DAP > 10 cm em 9 parcelas permanentes de 100 x 100 m (1 ha cada). Foram observados 4.724 indivíduos (525ind.ha-1), distribuídos em 42 famílias botânicas, 111 gêneros e 165 espécies. As famílias com maior número de indivíduos foram Fabaceae (1.883), Lecythidaceae (609) e Sapotaceae (434), perfazendo 52% do total de indivíduos amostrados. O grupo composto por espécies pioneiras apresentou maior número de indivíduos (219ind.ha-1), seguido das secundárias (193ind.ha-1) e climácicas (113ind.ha-1). No entanto, as secundárias obtiveram maior número de espécies (95), em detrimento de climácicas (44) e pioneiras (26). O índice de diversidade de Shannon (H' = 3,27) e o valor de equabilidade de Pielou (J = 0,64) foram inferiores aos obtidos em outros inventários florísticos na Amazônia Legal, contribuindo para isso o tamanho populacional de Pentaclethra macroloba. As espécies Pentaclethra macroloba (52,1), Eschweilera bracteosa (23,7) e Pouteria caimito (8,1) apresentaram os maiores valores de importância, perfazendo 28% do VI total. A maior parte dos indivíduos amostrados (71,3% = 374ind.ha-1) foram registrados no estrato médio (12,4 m < altura < 26,5 m) da floresta. A comunidade florestal pode ser considerada bem estruturada, madura e diversa, portanto em bom estado de conservação.

Caracterização do microbioma e dos perfis de resistência nos afluentes e efluentes de ETAR

Dissertação de mestrado integrado em Engenharia Biomédica (área de especialização em Engenharia Clínica)

Diversity and capacity to promote maize growth of bacteria isolated from the Amazon region

ABSTRACT Maize plants can establish beneficial associations with plant growth-promoting bacteria. However, few studies have been conducted on the characterization and inoculation of these bacteria in the Amazon region. This study aimed to characterize endophytic bacteria isolated from maize in the Amazon region and to assess their capacity to promote plant growth. Fifty-five bacterial isolates were obtained from maize grown in two types of ecosystems, i.e., a cerrado (savanna) and a forest area. The isolates were characterized by the presence of the nifH gene, their ability to synthesize indole-3-acetic acid (IAA) and solubilize calcium phosphate (CaHPO4), and 16S rRNA partial gene sequencing. Twenty-four bacteria contained the nifH gene, of which seven were isolated from maize plants cultivated in a cerrado area and seventeen from a forest area. Fourteen samples showed the capacity to synthesize IAA and only four solubilized calcium phosphate. The following genera were found among these isolates: Pseudomonas; Acinetobacter; Enterobacter; Pantoea; Burkholderia and Bacillus. In addition, eight isolates with plant growth-promoting capacity were selected for a glasshouse experiment involving the inoculation of two maize genotypes (a hybrid and a variety) grown in pots containing soil. Inoculation promoted the development of the maize plants but no significant interaction between maize cultivar and bacterial inoculation was found. A high diversity of endophytic bacteria is present in the Amazon region and these bacteria have potential to promote the development of maize plants.

Growth of sulfate reducing bacteria on the methanogenic inhibitor BES

The metabolism of methanogenic archaea is inhibited by 2-bromoethanesulfonate (BES). Methane production is blocked because BES is an analog of methyl-coenzyme M and competes with this key molecule in the last step of methanogenesis. For this reason, BES is commonly used in several studies to avoid growth of acetoclastic and hydrogenotrophic methanogens [1]. Despite its effectiveness as methanogenic inhibitor, BES was found to alter microbial communities’ structure, to inhibit the metabolism of non-methanogenic microorganisms and to stimulate homoacetogenic metabolism [2,3]. Even though sulfonates have been reported as electron acceptors for sulfate- and sulfite-reducing bacteria (SRB), only one study described the reduction of BES by complex microbial communities [4]. In this work, a sulfate-reducing bacterium belonging to Desulfovibrio genus (98 % identity at the 16S rRNA gene level with Desulfovibrio aminophilus) was isolated from anaerobic sludge after several successive transfers in anaerobic medium containing BES as sole substrate. Sulfate was not supplemented to the anaerobic growth medium. This microorganism was able to grow under the following conditions: on BES plus H2/CO2 in bicarbonate buffered medium; on BES without H2/CO2 in bicarbonate buffered medium; and on BES in phosphate buffered medium. The main products of BES utilization were sulfide and acetate, the former was produced by the reduction of sulfur from the sulfonate moiety of BES and the latter likely originated from the carbon backbone of the BES molecule. BES was found, in this study, to represent not only an alternative electron acceptor but also to serve as electron donor, and sole carbon and energy source, supporting growth of a Desulfovibrio sp. obtained in pure culture. This is the first study that reports growth of SRB with BES as electron donor and electron acceptor, showing that the methanogenic inhibitor is a substrate for anaerobic growth.

Who is who in anaerobic oil biodegradation?

[Excerpt] Anaerobic bioremediation is an important alternative for the common aerobic cleanup of subsurface petroleum-contaminated soil and water. Microbial communities involved in anaerobic oil biodegradation are scarcely studied, and only few mechanisms of anaerobic hydrocarbons degradation are described. In this work, microbial degradation of aliphatic hydrocarbons (AHC) was studied by using culture-dependent and culture-independent approaches. Hexadecane and hexadecene-degrading microbial communities were enriched under sulfate-reducing and methanogenic conditions. The microorganisms present in the enriched cultures were identified by 16S rRNA gene sequencing. (...)