Eocene-Oligocene diatoms in the western Indian Ocean

The occurrence of diatom species in the Eocene-Oligocene sections of Ocean Drilling Program (ODP) Leg 115 sites and Deep Sea Drilling Project (DSDP) Sites 219 and 236 in the low-latitude Indian Ocean are investigated. Diatoms are generally rare and poorly preserved in the Paleogene sequences we studied. The best-preserved assemblages are found close to ash layers in early Oligocene sediments. The low-latitude diatom zonation established for the Atlantic region by Fenner in 1984 is fully applicable to the Paleogene sequences of the western Indian Ocean. Correlation of the diatom zones to the calcareous nannofossil stratigraphy of the sites places the Coscinodiscus excavatus Zone of Fenner within calcareous nannofossil Subzone CP16b. For the Mascarene Plateau and the Chagos Ridge, the times when the sites studied, together with the areas upslope from them, subsided to below the euphotic zone are deduced from changes in the relative abundance between the group of benthic, shallow-water species and Grammatophora spp. vs. the group of fully planktonic diatom species. The Eocene section of Site 707, on the Mascarene Plateau, is characterized by the occurrence of benthic diatoms (approximately 10% of the diatom assemblage). These allochthonous diatoms must have originated from shallow-water environments around volcanic islands that existed upslope from ODP Site 707 in Eocene times. In Oligocene and younger sediments of Sites 707 and 706, occurrences of benthic diatoms are rare and sporadic and interpreted as reworked from older sediments. This indicates that the area upslope from these two Mascarene Plateau sites had subsided below the euphotic zone by the early Oligocene. Only Grammatophora spp., for which a neritic but not benthic habitat is assumed, continues to be abundant throughout the Oligocene sequences. The area of the Madingley Rise sites (Sites 709-710) and nearby shallower areas subsided below the euphotic zone already in middle Eocene times, as benthic diatoms are almost absent from these Eocene sections. Only sites located on abyssal plains, and which intermittently received turbidite sediments (e.g., Sites 708 and 711), contain occasionally single, benthic diatoms of Oligocene age. The occurrence of the freshwater diatom Aulacosira granulata in a few samples of late early Oligocene and late Oligocene age at Sites 707, 709, and 714 is interpreted as windblown. Their presence indicates at least seasonally arid conditions for these periods in the source areas of eastern Africa and India. Three new species and two new combinations are defined: Chaetoceros asymmetricus Fenner sp. nov.; Hemiaulus gracilis Fenner, sp. nov.; Kozloviella meniscosa Fenner, sp. nov.; Cestodiscus demergitus (Fenner) Fenner comb, nov.; and Rocella princeps (Jouse) Fenner comb. nov.

Middle to late Miocene oxygen isotope stratigraphy of ODP site 1085 (SE Atlantic): new constrains on Miocene climate variability and sea-level fluctuations

The middle Miocene delta18O increase represents a fundamental change in earth's climate system due to a major expansion and permanent establishment of the East Antarctic Ice Sheet accompanied by some effect of deepwater cooling. The long-term cooling trend in the middle to late Miocene was superimposed by several punctuated periods of glaciations (Mi-Events) characterized by oxygen isotopic shifts that have been related to the waxing and waning of the Antarctic ice-sheet and bottom water cooling. Here, we present a high-resolution benthic stable oxygen isotope record from ODP Site 1085 located at the southwestern African continental margin that provides a detailed chronology for the middle to late Miocene (13.9-7.3 Ma) climate transition in the eastern South Atlantic. A composite Fe intensity record obtained by XRF core scanning ODP Sites 1085 and 1087 was used to construct an astronomically calibrated chronology based on orbital tuning. The oxygen isotope data exhibit four distinct delta18O excursions, which have astronomical ages of 13.8, 13.2, 11.7, and 10.4 Ma and correspond to the Mi3, Mi4, Mi5, and Mi6 events. A global climate record was extracted from the oxygen isotopic composition. Both long- and short-term variabilities in the climate record are discussed in terms of sea-level and deep-water temperature changes. The oxygen isotope data support a causal link between sequence boundaries traced from the shelf and glacioeustatic changes due to ice-sheet growth. Spectral analysis of the benthic delta18O record shows strong power in the 400-kyr and 100-kyr bands documenting a paleoceanographic response to eccentricity-modulated variations in precession. A spectral peak around 180-kyr might be related to the asymmetry of the obliquity cycle indicating that the response of the dominantly unipolar Antarctic ice-sheet to obliquityinduced variations probably controlled the middle to late Miocene climate system. Maxima in the delta18O record, interpreted as glacial periods, correspond to minima in 100-kyr eccentricity cycle and minima in the 174-kyr obliquity modulation. Strong middle to late Miocene glacial events are associated with 400-kyr eccentricity minima and obliquity modulation minima. Thus, fluctuations in the amplitude of obliquity and eccentricity seem to be the driving force for the middle to late Miocene climate variability.

Calcareous nannofossil stratigraphy, mass accumulation rates and bulk density of sediments from ODP Leg 173 sites

Drilling on the Iberia Abyssal Plain during Ocean Drilling Program Leg 173 allowed us to recover Upper Cretaceous through Paleocene sediments at Sites 1068 and 1069 and only upper Paleocene sediments at Site 1067, which expands considerably the Upper Cretaceous to Paleocene record for this region. Of these three sites, Site 1068 recovered uppermost Cretaceous sediments as well as the most complete Paleocene record, whereas Site 1067 yielded only uppermost Paleocene sediments (Zone CP8). Site 1069 provided a rather complete upper Campanian through Maastrichtian section but a discontinuous Paleocene record. After a detailed calcareous nannofossil biostratigraphy was documented in distribution charts, we calculated mass accumulation rates for Holes 1068A and 1069A. Sediments in Hole 1068A apparently record the final stages of burial of a high basement block by turbidity flows. Accumulation rates through the Upper Cretaceous indicate relatively high rates, 0.95 g/cm**2/k.y., but may be unreliable because of the lack of datum points and/or possible hiatuses. Accumulation rates in the Paleocene section of Hole 1068A fluctuated every few million years from lower (~0.35 g/cm**2/k.y.) to higher rates (~0.85 g/cm**2/k.y.) until the latest Paleocene, when rates increased to an average of ~2.0 g/cm**2/k.y. Mass accumulation rates for the Upper Cretaceous in Hole 1069A indicate a steady rate of ~0.60 g/cm**2/k.y. from 75 to 72 Ma. There may have been one or more hiatuses between 72 and 68 Ma (combined Zone CC24 through Subzone CC25b), as indicated by the very low accumulation rate of 0.15 g/cm**2/k.y. The Paleocene section of Hole 1069A does not show the same continuous record, which may result from fluctuations in the carbonate compensation depth and poor recovery (average = 40%). Zones CP4 and CP5 are missing within a barren interval; this and numerous other barren intervals affect the precision of the nannofossil zonation and calculation of mass accumulation rates. However, in spite of these missing zones, mass accumulation rates do not seem to indicate the presence of hiatuses as the rates for this barren interval average ~1.0 g/cm**2/k.y. This study set out to test the hypothesis that a reliable biostratigraphic record could be constructed from sediments derived from turbidity flows deposited below the carbonate compensation depth. As illustrated here, not only could a reliable biostratigraphic record be determined from these sediments, but sedimentation and mass accumulation rates could also be determined, allowing inferences to be drawn concerning the sedimentary history of this passive margin. The reliability of this record is confirmed by independent verification by the establishment of a magnetostratigraphy for the same cores.

Planktonic foraminifera stratigraphy and datum events of ODP Leg 198 sites

During Leg 198 of the Ocean Drilling Program (ODP), Paleogene sediments were recovered form 10 holes at four sites along a bathymetric transect from the Southern High of Shatsky Rise. In terms of age, the Paleogene successions span from the Cretaceous/Paleocene boundary to the early Oligocene. Sediments are mainly composed of tan nannofossil ooze with scattered darker layers richer in clay. This data report concerns planktonic foraminiferal biostratigraphy from three holes, specifically Hole 1209A (water depth = 2387 m), Hole 1210A (water depth = 2573 m), and Hole 1211A (water depth = 2907 m). The thickness of Paleogene sediments is 105.90 m in Hole 1209A, 95.05 m in Hole 1210A, and 56.11 m in the deepest Hole 1211A. Preliminary investigations conducted on board revealed that at Site 1209 the succession was mostly complete, whereas the succession was more condensed at Site 1211.

Calcium carbonate stratigraphy of ODP Site 177-1090

A total of 776 sediment samples were measured for percent CaCO3 using a coulometer. These data are compared with percent blue reflectance (450-550 nm) measured with the Oregon State University split-core analysis track. In previous studies percent blue reflectance has been an excellent proxy for percent CaCO3 and in this study shows many of the main depositional trends (i.e., a 100-k.y. cycle, with a 55% reflectance range is evident in the upper 900 k.y., underlain by sediments exhibiting a 40-k.y. cycle with only a 30% reflectance range). Between ~21 and 5 Ma the average percent reflectance decreases from ~35% to ~8%. A similar decrease is also recorded between ~24 and 22 Ma. Percent CaCO3 trends closely match those of the percent blue spectral reflectance. This is especially well shown in the 100-k.y. cyclicity and in the interval between 24.5 and 21.5 Ma. In both intervals CaCO3 analyses are abundant. An exception occurs in the interval between 2 and 5 meters composite depth (~193 and 240 k.y.). There, percent CaCO3 and percent reflectance are out of phase. The lack of agreement is not likely to be due to a very wet core, in which water would dominate the spectral reflectance instead of sediment, or to problems with the composite depth slice. The discrepancy remains unexplained and provides clear evidence that when noninvasive measurements are used as proxies for chemical measurements they must be substantiated by the actual chemical or physical measurements.

Miocene stable isotope stratigraphy of ODP Hole 120-747A

We correlated Miocene d18O increases at Ocean Drilling Program Site 747 with d18O increases previously identified at North Atlantic Deep Sea Drilling Project Sites 563 and 608. The d18O increases have been directly tied to the Geomagnetic Polarity Time Scale (GPTS) at Site 563 and 608, and thus our correlations at Site 747 provide a second-order correlation to the GPTS. Comparison of the oxygen isotope record at Site 747 with records at Sites 563 and 608 indicates that three as-yet-undescribed global Miocene d18O increases may be recognized and used to define stable isotope zones. The d18O maxima associated with the bases of Zones Mila, Milb, and Mi7 have magnetochronologic age estimates of 21.8, 18.3, and 8.5 Ma, respectively. The correlation of a d18O maximum at 70 mbsf at Site 747 to the base of Miocene isotope Zone Mi3 (13.6 Ma) provides a revised interpretation of four middle Miocene normal polarity intervals observed between 77 and 63 mbsf at Hole 747A. Oxygen isotope stratigraphy indicates that the reversed polarity interval at 70 mbsf, initially interpreted as Chronozone C5AAr, should be C5ABr. Instead of a concatenated Chronozone C5AD-C5AC with distinct Chronozones C5AB, C5AA, and C5A (as in the preliminary interpretation), d18O stratigraphy suggests that these normal polarity intervals are Chronozones C5AD, C5AC, and C5AB, whereas Chronozones C5AA-C5A are concatenated. This interpretation is supported by the d13C correlations. The upper Miocene magnetostratigraphic record at Hole 747A is ambiguous. Two upper Miocene d18O events at Site 747 can be correlated to the oxygen isotope records at Site 563 and 608 using the magnetostratigraphy derived at Hole 747B. Our chronostratigraphic revisions highlight the importance of stable isotope stratigraphy in attaining an integrated stratigraphic framework for the Miocene.

Metadata und statistic analysis of archael and bacterial sequences originating from sediments of the Håkon Mosby mud volcano (Z1-Z3, all habitats)

DNA extraction was carried out as described on the MICROBIS project pages (http://icomm.mbl.edu/microbis ) using a commercially available extraction kit. We amplified the hypervariable regions V4-V6 of archaeal and bacterial 16S rRNA genes using PCR and several sets of forward and reverse primers (http://vamps.mbl.edu/resources/primers.php). Massively parallel tag sequencing of the PCR products was carried out on a 454 Life Sciences GS FLX sequencer at Marine Biological Laboratory, Woods Hole, MA, following the same experimental conditions for all samples. Sequence reads were submitted to a rigorous quality control procedure based on mothur v30 (doi:10.1128/AEM.01541-09) including denoising of the flow grams using an algorithm based on PyroNoise (doi:10.1038/nmeth.1361), removal of PCR errors and a chimera check using uchime (doi:10.1093/bioinformatics/btr381). The reads were taxonomically assigned according to the SILVA taxonomy (SSURef v119, 07-2014; doi:10.1093/nar/gks1219) implemented in mothur and clustered at 98% ribosomal RNA gene V4-V6 sequence identity. V4-V6 amplicon sequence abundance tables were standardized to account for unequal sampling effort using 1000 (Archaea) and 2300 (Bacteria) randomly chosen sequences without replacement using mothur and then used to calculate inverse Simpson diversity indices and Chao1 richness (doi:10.2307/4615964). Bray-Curtis dissimilarities (doi:10.2307/1942268) between all samples were calculated and used for 2-dimensional non metric multidimensional scaling (NMDS) ordinations with 20 random starts (doi:10.1007/BF02289694). Stress values below 0.2 indicated that the multidimensional dataset was well represented by the 2D ordination. NMDS ordinations were compared and tested using Procrustes correlation analysis (doi:10.1007/BF02291478). All analyses were carried out with the R statistical environment and the packages vegan (available at: http://cran.r-project.org/package=vegan), labdsv (available at: http://cran.r-project.org/package=labdsv), as well as with custom R scripts. Operational taxonomic units at 98% sequence identity (OTU0.03) that occurred only once in the whole dataset were termed absolute single sequence OTUs (SSOabs; doi:10.1038/ismej.2011.132). OTU0.03 sequences that occurred only once in at least one sample, but may occur more often in other samples were termed relative single sequence OTUs (SSOrel). SSOrel are particularly interesting for community ecology, since they comprise rare organisms that might become abundant when conditions change.16S rRNA amplicons and metagenomic reads have been stored in the sequence read archive under SRA project accession number SRP042162.