Change detection in boreal forests using bi-temporal aerial photographs

[Abstract]

Short-term stability of testosterone and epitestosterone conjugates in urine samples: quantification by liquid chromatography-linear ion trap mass spectrometry.

A simple method using liquid chromatography-linear ion trap mass spectrometry for simultaneous determination of testosterone glucuronide (TG), testosterone sulfate (TS), epitestosterone glucuronide (EG) and epitestosterone sulfate (ES) in urine samples was developed. For validation purposes, a urine containing no detectable amount of TG, TS and EG was selected and fortified with steroid conjugate standards. Quantification was performed using deuterated testosterone conjugates to correct for ion suppression/enhancement during ESI. Assay validation was performed in terms of lower limit of detection (1-3ng/mL), recovery (89-101%), intraday precision (2.0-6.8%), interday precision (3.4-9.6%) and accuracy (101-103%). Application of the method to short-term stability testing of urine samples at temperature ranging from 4 to 37 degrees C during a time-storage of a week lead to the conclusion that addition of sodium azide (10mg/mL) is required for preservation of the analytes.

High-resolution mass spectrometry applied to theidentification of transformation products of quinolones from stability studies and new metabolites of enrofloxacin in chicken muscle tissues

The aim of this work was the identification of new metabolites and transformation products (TPs) in chicken muscle from Enrofloxacin (ENR), Ciprofloxacin (CIP), Difloxacin (DIF) and Sarafloxacin (SAR), which are antibiotics that belong to the fluoroquinolones family. The stability of ENR, CIP, DIF and SAR standard solutions versus pH degradation process (from pH 1.5 to 8.0, simulating the pH since the drug is administered until its excretion) and freeze-thawing (F/T) cycles was tested. In addition, chicken muscle samples from medicated animals with ENR were analyzed in order to identify new metabolites and TPs. The identification of the different metabolites and TPs was accomplished by comparison of mass spectral data from samples and blanks, using liquid chromatography coupled to quadrupole time-of-flight (LC-QqToF) and Multiple Mass Defect Filter (MMDF) technique as a pre-filter to remove most of the background noise and endogenous components. Confirmation and structure elucidation was performed by liquid chromatography coupled to linear ion trap quadrupole Orbitrap (LC-LTQ-Orbitrap), due to its mass accuracy and MS/MS capacity for elemental composition determination. As a result, 21 TPs from ENR, 6 TPs from CIP, 14 TPs from DIF and 12 TPs from SAR were identified due to the pH shock and F/T cycles. On the other hand, 14 metabolites were identified from the medicated chicken muscle samples. Formation of CIP and SAR, from ENR and DIF, respectively, and the formation of desethylene-quinolone were the most remarkable identified compounds.

Temporal variation in glucocorticoid levels during the resting phase is associated in opposite way with maternal and paternal melanic coloration.

Sex-dependent selection can help maintain sexual dimorphism. When the magnitude of selection exerted on a heritable sex trait differs between the sexes, it may prevent each sex to reach its phenotypic optimum. As a consequence, the benefit of expressing a sex trait to a given value may differ between males and females favouring sex-specific adaptations associated with different values of a sex trait. The level of metabolites regulated by genes that are under sex-dependent selection may therefore covary with the degree of ornamentation differently in the two sexes. We investigated this prediction in the barn owl, a species in which females display on average larger black spots on the plumage than males, a heritable ornament. This melanin-based colour trait is strongly selected in females and weakly counter-selected in males indicating sex-dependent selection. In nestling barn owls, we found that daily variation in baseline corticosterone levels, a key hormone that mediates life history trade-offs, covaries with spot diameter displayed by their biological parents. When their mother displayed larger spots, nestlings had lower corticosterone levels in the morning and higher levels in the evening, whereas the opposite pattern was found with the size of paternal spots. Our study suggests a link between daily regulation of glucocorticoids and sex-dependent selection exerted on sexually dimorphic melanin-based ornaments.

Agronomic performance, chromosomal stability and resistance to velvetbean caterpillar of transgenic soybean expressing cry1Ac gene

The objective of this work was to analyze the agronomic performance and chromosomal stability of transgenic homozygous progenies of soybean [Glycine max (L.) Merrill.], and to confirm the resistance of these plants against Anticarsia gemmatalis. Eleven progenies expressing cry1Ac, hpt and gusA genes were evaluated for agronomic characteristics in relation to the nontransformed parent IAS 5 cultivar. Cytogenetical analysis was carried out on transgenic and nontransgenic plants. Two out of the 11 transgenic progenies were also evaluated, in vitro and in vivo, for resistance to A. gemmatalis. Two negative controls were used in resistance bioassays: a transgenic homozygous line, containing only the gusA reporter gene, and nontransgenic 'IAS 5' plants. The presence of cry1Ac transgene affected neither the development nor the yield of plants. Cytogenetical analysis showed that transgenic plants presented normal karyotype. In detached-leaf bioassay, cry1Ac plants exhibited complete efficacy against A. gemmatalis, whereas negative controls were significantly damaged. Whole-plant feeding assay confirmed a very high protection of cry1Ac against velvetbean caterpillar, while nontransgenic 'IAS 5' plants and homozygous gusA line exhibited 56.5 and 71.5% defoliation, respectively. The presence of cry1Ac transgene doesn't affect the majority of agronomic traits (including yield) of soybean and grants high protection against A. gemmatalis.

Estudo da dinâmica espaço-temporal do bioma Pantanal por meio de imagens MODIS

O objetivo deste trabalho foi avaliar dados multitemporais, obtidos pelo sensor "moderate resolution imaging spectroradiometer" (MODIS), para o estudo da dinâmica espaço-temporal de duas sub-regiões do bioma Pantanal. Foram utilizadas 139 imagens "enhanced vegetation index" (EVI), do produto MOD13 "vegetation index", dados de altimetria oriundos do "shuttle radar topography mission" (SRTM) e dados de precipitação do "tropical rainfall measuring mission" (TRMM). Para a redução da dimensionalidade dos dados, as imagens MODIS-EVI foram amostradas com base nas curvas de nível espaçadas em 10 m. Foram aplicadas as técnicas de análise de autocorrelação e análise de agrupamentos aos dados das amostras, e a análise de componentes principais na área total da imagem. Houve dependência tanto temporal quanto espacial da resposta espectral com a precipitação. A análise de agrupamentos apontou a presença de dois grupos, o que indicou a necessidade da análise completa da área. A análise de componentes principais permitiu diferenciar quatro comportamentos distintos: as áreas permanentemente alagadas; as áreas não inundáveis, compostas por vegetação; as áreas inundáveis com maior resposta de vegetação; e áreas com vegetação ripária.

Modelo autologístico espaço-temporal com aplicação à análise de padrões espaciais da leprose-dos-citros

O objetivo deste trabalho foi propor estratégias de modelagem aplicadas aos dados de incidência de leprose-dos-citros, por meio do uso de um modelo autologístico espaço-temporal. A adequação do modelo autologístico foi avaliada quanto à: análise de dados provenientes de avaliações feitas em diferentes momentos; detecção de padrões espaciais da doença, pela avaliação de diferentes estruturas de vizinhança; consideração do efeito defasado no tempo de covariáveis de vizinhança; e ao efeito do ácaro transmissor na probabilidade de nova infecção. O modelo autologístico espaço-temporal adotado estendeu o modelo logístico usual, em que a estrutura de vizinhança é descrita por meio da construção de covariáveis, a partir da resposta observada em plantas vizinhas à planta avaliada, na mesma avaliação, ou em avaliações anteriores. Os dados de incidência de leprose nas plantas de citros foram coletados em pontos referenciados no espaço, durante aproximadamente dois anos. Os modelos detectam o efeito da presença do vetor e os padrões espaciais na ocorrência de novas infecções, tanto para covariáveis de vizinhança da mesma avaliação, quanto para covariáveis de vizinhança da avaliação anterior. Além disso, os modelos considerados permitem quantificar as variações na probabilidade de ocorrência da doença de acordo com o estado da doença e com a incidência do ácaro transmissor.

Geoport Estadistic: aplicación web para el desarrollo de herramientas de análisis y consulta de la información estadística del Port de Barcelona, incluyendo la componente temporal

El següent projecte mostra la creació d’una aplicació web-map per a la realització de consultes sobre l’informació estadística relacionada amb el port de Barcelona. Aquesta aplicació integra les eines d'anàlisi estadística de Google Fusion Tables, i les llibreries per realitzar un visor geogràfic-temporal que són Timemap i Google Earth

Temporal changes of an alfalfa succession and related soil physical properties on the Loess Plateau, China

The objective of this work was to investigate the relationship between changes in the plant community and changes in soil physical properties and water availability, during a succession from alfalfa (Medicago sativa L.) to natural vegetation on the Loess Plateau, China. Data from a succession sere spanning 32 years were collated, and vegetative indexes were compared to changes related to soil bulk density and soil water storage. The alfalfa yield increased for approximately 7 years, then it declined and the alfalfa was replaced by a natural community dominated by Stipa bungeana that began to thrive about 10 years after alfalfa seeding. Soil bulk density increased over time, but the deterioration of the alfalfa was mainly ascribed to a severe reduction in soil water storage, which was lowest around the time when degradation commenced. The results indicated that water consumption by alfalfa could be reduced by reducing plant density. The analysis of the data also suggested that soil water recharge could be facilitated by rotating the alfalfa with other crops, natural vegetation, or bare soil.

Variação temporal de propriedades físicas do solo e crescimento radicular de feijoeiro em quatro sistemas de manejo

Os objetivos deste trabalho foram determinar a variação temporal da porosidade, da densidade e da resistência à penetração do solo, em quatro sistemas de manejo, e estudar seus efeitos sobre o crescimento radicular do feijoeiro (Phaseolus vulgaris). O experimento foi conduzido em Argissolo, em delineamento experimental de blocos ao acaso, com três repetições. Os tratamentos foram: plantio direto há 10 anos, preparo convencional, plantio em solo escarificado recentemente (Esc. recente) e plantio direto sobre área escarificada há 1 ano (Esc. 1 ano). A escarificação reduziu a densidade média do solo e aumentou a porosidade total durante o ciclo do feijoeiro. A maior densidade ocorreu na camada de 0,10-0,15 m dos sistemas plantio direto e Esc. 1 ano. A resistência à penetração foi a propriedade que melhor caracterizou e diferenciou os sistemas de manejo, as camadas com impedimento e o efeito do tempo de amostragem, porém não afetou o crescimento radicular do feijoeiro. Os efeitos da escarificação sobre a densidade e a resistência à penetração desapareceram um ano após a escarificação, o que indica a reconsolidação do solo.

Seed priming and sulfur effects on soybean cell membrane stability and yield in saline soil

The objective of this work was to determine the effects of seed priming and sulfur application on cell membrane characteristics, seedling emergence, chlorophyll content and grain yield of soybean (Glycine max) in saline soil. A complete-block design in 4x3 factorial arrangement with three replicates was used to test four types of seed priming (water, auxin, gibberellin and non-priming) and three levels of sulfate availability (0, 70 and 140 kg ha-1 K2SO4). The soil had a silty loam texture with an electrical conductivity of 3.61 ds m-1, a pH of 8.2 and a saturation percentage of about 46%. Seed priming had significant effects on mean emergence rate (MER), emergence percentage, relative water content (RWC) of leaves, relative chlorophyll content, time of maturity, shoot length and grain yield. The highest values for these variables were observed in the priming treatments, except for the time of maturity. Sulfur application had significant effects on MER, shoot length, RWC, membrane injury index and grain yield. Priming treatments provide greater emergence rates and grain yields and interact sinergicaly with sulfur rates.

Estimating soybean crop areas using spectral-temporal surfaces derived from MODIS images in Mato Grosso, Brazil

The objective of this work was to evaluate the application of the spectral-temporal response surface (STRS) classification method on Moderate Resolution Imaging Spectroradiometer (MODIS, 250 m) sensor images in order to estimate soybean areas in Mato Grosso state, Brazil. The classification was carried out using the maximum likelihood algorithm (MLA) adapted to the STRS method. Thirty segments of 30x30 km were chosen along the main agricultural regions of Mato Grosso state, using data from the summer season of 2005/2006 (from October to March), and were mapped based on fieldwork data, TM/Landsat-5 and CCD/CBERS-2 images. Five thematic classes were considered: Soybean, Forest, Cerrado, Pasture and Bare Soil. The classification by the STRS method was done over an area intersected with a subset of 30x30-km segments. In regions with soybean predominance, STRS classification overestimated in 21.31% of the reference values. In regions where soybean fields were less prevalent, the classifier overestimated 132.37% in the acreage of the reference. The overall classification accuracy was 80%. MODIS sensor images and the STRS algorithm showed to be promising for the classification of soybean areas in regions with the predominance of large farms. However, the results for fragmented areas and smaller farms were less efficient, overestimating soybean areas.

Spatio-temporal sequence of cross-regulatory events in root meristem growth.

A central question in developmental biology is how multicellular organisms coordinate cell division and differentiation to determine organ size. In Arabidopsis roots, this balance is controlled by cytokinin-induced expression of SHORT HYPOCOTYL 2 (SHY2) in the so-called transition zone of the meristem, where SHY2 negatively regulates auxin response factors (ARFs) by protein-protein interaction. The resulting down-regulation of PIN-FORMED (PIN) auxin efflux carriers is considered the key event in promoting differentiation of meristematic cells. Here we show that this regulation involves additional, intermediary factors and is spatio-temporally constrained. We found that the described cytokinin-auxin crosstalk antagonizes BREVIS RADIX (BRX) activity in the developing protophloem. BRX is an auxin-responsive target of the prototypical ARF MONOPTEROS (MP), a key promoter of vascular development, and transiently enhances PIN3 expression to promote meristem growth in young roots. At later stages, cytokinin induction of SHY2 in the vascular transition zone restricts BRX expression to down-regulate PIN3 and thus limit meristem growth. Interestingly, proper SHY2 expression requires BRX, which could reflect feedback on the auxin responsiveness of SHY2 because BRX protein can directly interact with MP, likely acting as a cofactor. Thus, cross-regulatory antagonism between BRX and SHY2 could determine ARF activity in the protophloem. Our data suggest a model in which the regulatory interactions favor BRX expression in the early proximal meristem and SHY2 prevails because of supplementary cytokinin induction in the later distal meristem. The complex equilibrium of this regulatory module might represent a universal switch in the transition toward differentiation in various developmental contexts.