Characterising strengths, weakness, opportunities and threats in producing naked oat as a novel crop for northern growing conditions

Selostus: Paljasjyväinen kaura uutena viljelykasvina Suomen kasvuoloissa

Plantar flexor neuromuscular adjustments following match-play football in hot and cool conditions.

We assessed neuromuscular fatigue and recovery of the plantar flexors after playing football with or without severe heat stress. Neuromuscular characteristics of the plantar flexors were assessed in 17 male players at baseline and ∼30 min, 24, and 48 h after two 90-min football matches in temperate (∼20 °C and 55% rH) and hot (∼43 °C and 20% rH) environments. Measurements included maximal voluntary strength, muscle activation, twitch contractile properties, and rate of torque development and soleus EMG (i.e., root mean square activity) rise from 0 to 30, -50, -100, and -200 ms during maximal isometric contractions for plantar flexors. Voluntary activation and peak twitch torque were equally reduced (-1.5% and -16.5%, respectively; P < 0.05) post-matches relative to baseline in both conditions, the latter persisting for at least 48 h, whereas strength losses (∼5%) were not significant. Absolute explosive force production declined (P < 0.05) 30 ms after contraction onset independently of condition, with no change at any other epochs. Globally, normalized rate of force development and soleus EMG activity rise values remained unchanged. In football, match-induced alterations in maximal and rapid torque production capacities of the plantar flexors are moderate and do not differ after competing in temperate and hot environments.

Alterations in growth and canopy architecture among dwarf, semidwarf and tall oat lines grown under northern conditions

Selostus: Korkeudeltaan eri tyyppisten kauralinjojen kasvu ja sadontuotto pohjoisissa viljelyoloissa

Paper Surface Image Processing for Roughness Quality Measurement

Diplomityössä on käsitelty paperin pinnankarkeuden mittausta, joka on keskeisimpiä ongelmia paperimateriaalien tutkimuksessa. Paperiteollisuudessa käytettävät mittausmenetelmät sisältävät monia haittapuolia kuten esimerkiksi epätarkkuus ja yhteensopimattomuus sileiden papereiden mittauksissa, sekä suuret vaatimukset laboratorio-olosuhteille ja menetelmien hitaus. Työssä on tutkittu optiseen sirontaan perustuvia menetelmiä pinnankarkeuden määrittämisessä. Konenäköä ja kuvan-käsittelytekniikoita tutkittiin karkeilla paperipinnoilla. Tutkimuksessa käytetyt algoritmit on tehty Matlab® ohjelmalle. Saadut tulokset osoittavat mahdollisuuden pinnankarkeuden mittaamiseen kuvauksen avulla. Parhaimman tuloksen perinteisen ja kuvausmenetelmän välillä antoi fraktaaliulottuvuuteen perustuva menetelmä.

Testing a new multigroup inference approach to reconstructing past environmental conditions

A new, quantitative, inference model for environmental reconstruction (transfer function), based for the first time on the simultaneous analysis of multigroup species, has been developed. Quantitative reconstructions based on palaeoecological transfer functions provide a powerful tool for addressing questions of environmental change in a wide range of environments, from oceans to mountain lakes, and over a range of timescales, from decades to millions of years. Much progress has been made in the development of inferences based on multiple proxies but usually these have been considered separately, and the different numeric reconstructions compared and reconciled post-hoc. This paper presents a new method to combine information from multiple biological groups at the reconstruction stage. The aim of the multigroup work was to test the potential of the new approach to making improved inferences of past environmental change by improving upon current reconstruction methodologies. The taxonomic groups analysed include diatoms, chironomids and chrysophyte cysts. We test the new methodology using two cold-environment training-sets, namely mountain lakes from the Pyrenees and the Alps. The use of multiple groups, as opposed to single groupings, was only found to increase the reconstruction skill slightly, as measured by the root mean square error of prediction (leave-one-out cross-validation), in the case of alkalinity, dissolved inorganic carbon and altitude (a surrogate for air-temperature), but not for pH or dissolved CO2. Reasons why the improvement was less than might have been anticipated are discussed. These can include the different life-forms, environmental responses and reaction times of the groups under study.

Energiataseen hallinta ja optimointi metsäteollisuusintegraatissa

Diplomityö on tehty UPM-Kymmene Oyj, Kaukaan tehtailla Lappeenrannassa. Integroidussa metsäteollisuudessa energiantuotanto koostuu yleensä sähkön- ja lämmöntuotannosta. Kaukaan tehtailla prosessien lämmöntarve saadaan katettua kokonaisuudessaan omalla tuotannolla, kun taas kulutetusta sähköstä ainoastaan puolet on tuotettu itse. Loput sähköntarpeesta joudutaan ostamaan ulkopuolelta. Tutkimuksen pääpaino on ollut selvittää, miten kustannukset ovat riippuvaisia energiantuotannosta erilaisissa käyttöolosuhteissa. Työn tuloksena on luotu tietokonepohjainen laskentamalli, jonka avulla Kaukaan tehtaiden energiantuotantoa voidaan ohjata taloudellisesti optimaalisimmalla tavalla kulloinkin vallitsevassa käyttötilanteessa. Lisäksi tutkimuksessa on analysoitu tehdasintegraatin lämmönkulutuksen seurannan mahdollisuuksia lämmönsiirtoverkon nykyisten mittausten perusteella. Työssä on kerrottu yleisesti metsäteollisuuden energiankulutuksesta Suomessa. Lisäksi on esitetty arvioita energiankulutuksen kehityksestä tulevaisuudessa sekä keinoja energiatehokkuuden parantamiseksi. Kaukaan tehtailla lämmönkulutuksen seurantaan käytettävät mittausmenetelmät ja -laitteet on esitelty virtausmittausten osalta sekä arvioitu nykyisten mittausten luotettavuutta ja riittävyyttä kokonaisvaltaisen lämpötaseen hallintaan. Kaukaan tehtaiden energiantuotantojärjestelmästä on luotu termodynaaminen malli, johon energiantuotannosta aiheutuneiden kustannusten laskenta perustuu. Energiantuotannon optimoinnilla pyritään määrittelemään tietyn tarkasteluhetken käyttötilanteessa taloudellisesti optimaalisin kattiloiden ajojärjestys. Tarkastelu on rajattu lämmöntuotannon lisäämisen osalta maakaasun käytön lisäämiseen ja höyryturbiinien ohitukseen. Sähkön ja maakaasun hinnan sekä ympäristön lämpötilan vaihtelujen vaikutusta optimaaliseen ajojärjestykseen on havainnollistettu esimerkkien avulla.

Vaihtoehtotarkastelu tiehankkeiden ympäristövaikutusten arviointimenettelyssä ja sen merkitys tiehankkeita koskevassa päätöksenteossa

Tutkimus käsittelee YVA-lain mukaiseen ympäristövaikutusten arviointimenettelyyn (YVA-menettely) liittyvää vaihtoehtotarkastelua. Yleisessä vaihtoehtotarkastelua koskevassa osiossa selvitetään lainsäädännön asettamat vaihtoehtotarkastelua koskevat sisältövaatimukset. Tutkimuksen perusteella lainsäädäntö, mukaan lukien EY-oikeus, antaa vain vähän viitteitä siihen milloin vaihtoehtotarkastelu on riittävää. YVA:n laadunarvioinnissa ja siten myös vaihtoehtotarkastelun riittävyyden arvioinnissa yhteysviranomaiselle on annettu suuri rooli. Erilaisten YVA-menettelyä koskevien tutkimusten perusteella vaihtoehtojen valintaan ja vertailuun liittyen oli kuitenkin löydettävissä selkeät kriteerit, jotka määrittävät vaihtoehtotarkastelun laatua ja riittävyyttä. Tutkimuksen toisessa osiossa tarkastellaan vaihtoehtotarkasteluun liittyvää käytäntöä tiehankkeiden YVA-menettelyssä. Tutkimus perustuu tiehankkeiden YVA-menettelyä koskeviin oppaisiin, sekä neljään esimerkkihankkeeseen. Laadunarviointikriteerien perusteella tehdään myös esimerkkihankkeiden vaihtoehtojen valintaan ja vertailuun liittyvää laadunarviointia. Erityistä huomiota kiinnitetään sosiaalisten vaikutusten merkitykseen vaihtoehtotarkastelussa. Laadunarviointi tehdään esimerkkihankkeiden kirjallisten YVA-asiakirjojen pohjalta. Tiehankkeissa tarkasteltavat vaihtoehdot ovat yleensä erilaisia linjausvaihtoehtoja. Tästä syystä vaihtoehtotarkastelun merkitys korostuu tiehankkeissa, sillä vaihtoehtojen ympäristövaikutukset ovat usein hyvin erilaiset. Tutkimuksen perusteella YVA:n vaihtoehtotarkastelun avulla pyritään myös aidosti löytämään hankkeelle ympäristön kannalta paras vaihtoehto. Näin ollen tarkasteltavat vaihtoehdot ovat yleensä realistisia ja kaikki toteuttamiskelpoiset vaihtoehdot pyritään tutkimaan. Myös sosiaaliset vaikutukset huomioidaan muiden ympäristövaikutusten tapaan vaihtoehtotarkastelussa. Joitakin kehittämiskohteita tuli laadunarvioinnissa kuitenkin esille. Suurimmat puutteet vaihtoehtojen valinnassa koskevat vaihtoehtojen valinnan perusteluita. Vaihtoehtojen valinta tulisi perustella tarkemmin, jotta tiedetään esimerkiksi ovatko kaikki keskeiset vaihtoehdot tutkittu. Vaihtoehtojen vertailussa puutteena oli usein se, että tietoa vaihtoehdoista aiheutuvien vaikutusten merkittävyydestä ei ole esitetty. Nykyistä enemmän tulisi kiinnittää huomiota myös hankekokonaisuuteen sekä vaikutuksiin koko hankkeen elinkaaren ajalta. Tutkimuksen viimeisessä osiossa arvioidaan vaihtoehtotarkastelun merkitystä tiehankkei-den suunnittelussa ja erilaisissa lupapäätöksissä. Tutkimuksen perusteella tien yleissuunnitelmavaiheessa tehtävällä YVA:n vaihtoehtotarkastelulla on hyvät mahdollisuudet vaikuttaa hankkeen vaihtoehtojen muotoutumiseen. YVA:n vaihtoehtotarkastelulla on myös merkittävä rooli yleissuunnitelmaan valittavan vaihtoehdon valinnassa. Hankkeelle asetetut tarkat reunaehdot voivat kuitenkin rajoittaa vaihtoehtotarkastelun huomioonottamismahdollisuutta. Vaihtoehtotarkastelulla voi olla merkitystä myös tiehankkeiden lupapäätöksissä, mutta käytännössä tämän merkitys lienee vähäinen.

Evolutionary Games in Networked Populations: Models and Experiments

Cooperation and coordination are desirable behaviors that are fundamental for the harmonious development of society. People need to rely on cooperation with other individuals in many aspects of everyday life, such as teamwork and economic exchange in anonymous markets. However, cooperation may easily fall prey to exploitation by selfish individuals who only care about short- term gain. For cooperation to evolve, specific conditions and mechanisms are required, such as kinship, direct and indirect reciprocity through repeated interactions, or external interventions such as punishment. In this dissertation we investigate the effect of the network structure of the population on the evolution of cooperation and coordination. We consider several kinds of static and dynamical network topologies, such as Baraba´si-Albert, social network models and spatial networks. We perform numerical simulations and laboratory experiments using the Prisoner's Dilemma and co- ordination games in order to contrast human behavior with theoretical results. We show by numerical simulations that even a moderate amount of random noise on the Baraba´si-Albert scale-free network links causes a significant loss of cooperation, to the point that cooperation almost vanishes altogether in the Prisoner's Dilemma when the noise rate is high enough. Moreover, when we consider fixed social-like networks we find that current models of social networks may allow cooperation to emerge and to be robust at least as much as in scale-free networks. In the framework of spatial networks, we investigate whether cooperation can evolve and be stable when agents move randomly or performing Le´vy flights in a continuous space. We also consider discrete space adopting purposeful mobility and binary birth-death process to dis- cover emergent cooperative patterns. The fundamental result is that cooperation may be enhanced when this migration is opportunistic or even when agents follow very simple heuristics. In the experimental laboratory, we investigate the issue of social coordination between indi- viduals located on networks of contacts. In contrast to simulations, we find that human players dynamics do not converge to the efficient outcome more often in a social-like network than in a random network. In another experiment, we study the behavior of people who play a pure co- ordination game in a spatial environment in which they can move around and when changing convention is costly. We find that each convention forms homogeneous clusters and is adopted by approximately half of the individuals. When we provide them with global information, i.e., the number of subjects currently adopting one of the conventions, global consensus is reached in most, but not all, cases. Our results allow us to extract the heuristics used by the participants and to build a numerical simulation model that agrees very well with the experiments. Our findings have important implications for policymakers intending to promote specific, desired behaviors in a mobile population. Furthermore, we carry out an experiment with human subjects playing the Prisoner's Dilemma game in a diluted grid where people are able to move around. In contrast to previous results on purposeful rewiring in relational networks, we find no noticeable effect of mobility in space on the level of cooperation. Clusters of cooperators form momentarily but in a few rounds they dissolve as cooperators at the boundaries stop tolerating being cheated upon. Our results highlight the difficulties that mobile agents have to establish a cooperative environment in a spatial setting without a device such as reputation or the possibility of retaliation. i.e. punishment. Finally, we test experimentally the evolution of cooperation in social networks taking into ac- count a setting where we allow people to make or break links at their will. In this work we give particular attention to whether information on an individual's actions is freely available to poten- tial partners or not. Studying the role of information is relevant as information on other people's actions is often not available for free: a recruiting firm may need to call a job candidate's refer- ences, a bank may need to find out about the credit history of a new client, etc. We find that people cooperate almost fully when information on their actions is freely available to their potential part- ners. Cooperation is less likely, however, if people have to pay about half of what they gain from cooperating with a cooperator. Cooperation declines even further if people have to pay a cost that is almost equivalent to the gain from cooperating with a cooperator. Thus, costly information on potential neighbors' actions can undermine the incentive to cooperate in dynamical networks.

Sphingomonas wittichii RW1 gene reporters interrogating the dibenzofuran metabolic network highlight conditions for early successful development in contaminated microcosms.

In order to better understand the fate and activity of bacteria introduced into contaminated material for the purpose of enhancing biodegradation rates, we constructed Sphingomonas wittichii RW1 variants with gene reporters interrogating dibenzofuran metabolic activity. Three potential promoters from the dibenzofuran metabolic network were selected and fused to the gene for enhanced green fluorescent protein (EGFP). The stability of the resulting genetic constructions in RW1 was examined, with plasmids based on the broad-host range vector pME6012 being the most reliable. One of the selected promoters, upstream of the gene Swit_4925 for a putative 2-hydroxy-2,4-pentadienoate hydratase, was inducible by growth on dibenzofuran. Sphingomonas wittichii RW1 equipped with the Swit_4925 promoter egfp fusion grew in a variety of non-sterile sandy microcosms contaminated with dibenzofuran and material from a former gasification site. The strain also grew in microcosms without added dibenzofuran but to a very limited extent, and EGFP expression indicated the formation of consistent small subpopulations of cells with an active inferred dibenzofuran metabolic network. Evidence was obtained for competition for dibenzofuran metabolites scavenged by resident bacteria in the gasification site material, which resulted in a more rapid decline of the RW1 population. Our results show the importance of low inoculation densities in order to observe the population development of the introduced bacteria and further illustrate that the limited availability of unique carbon substrate may be the most important factor impinging growth.

Fingermark initial composition and aging using Fourier transform infrared microscopy (μ-FTIR)

This study investigated fingermark residues using Fourier transform infrared microscopy (μ- FTIR) in order to obtain fundamental information about the marks' initial composition and aging kinetics. This knowledge would be an asset for fundamental research on fingermarks, such as for dating purposes. Attenuated Total Reflection (ATR) and single-point reflection modes were tested on fresh fingermarks. ATR proved to be better suited and this mode was subsequently selected for further aging studies. Eccrine and sebaceous material was found in fresh and aged fingermarks and the spectral regions 1000-1850 cm-1 and 2700-3600 cm-1 were identified as the most informative. The impact of substrates (aluminium and glass slides) and storage conditions (storage in the light and in the dark) on fingermark aging was also studied. Chemometric analyses showed that fingermarks could be grouped according to their age regardless of the substrate when they were stored in an open box kept in an air-conditioned laboratory at around 20°C next to a window. On the contrary, when fingermarks were stored in the dark, only specimens deposited on the same substrate could be grouped by age. Thus, the substrate appeared to influence aging of fingermarks in the dark. Furthermore, PLS regression analyses were conducted in order to study the possibility of modelling fingermark aging for potential fingermark dating applications. The resulting models showed an overall precision of ±3 days and clearly demonstrated their capability to differentiate older fingermarks (20 and 34-days old) from newer ones (1, 3, 7 and 9-days old) regardless of the substrate and lighting conditions. These results are promising from a fingermark dating perspective. Further research is required to fully validate such models and assess their robustness and limitations in uncontrolled casework conditions.

Executive functions profile in extreme eating/weight conditions: from anorexia nervosa to obesity

Extreme weight conditions (EWC) groups along a continuum may share some biological risk factors and intermediate neurocognitive phenotypes. A core cognitive trait in EWC appears to be executive dysfunction, with a focus on decision making, response inhibition and cognitive flexibility. Differences between individuals in these areas are likely to contribute to the differences in vulnerability to EWC. The aim of the study was to investigate whether there is a common pattern of executive dysfunction in EWC while comparing anorexia nervosa patients (AN), obese subjects (OB) and healthy eating/weight controls (HC).