Inovação do método MIA-QSAR: aplicação para doenças tropicais negligenciadas

Multivariate image analysis applied to the quantitative structure-activity relationships (MIA-QSAR) is a 2D QSAR technique that has been presenting promising outcomes for the development of new drug candidates, due to its simplicity, rapidity and low cost. In this way, the present study aims at introducing, consolidating and improving the new dimensions named aug-MIA-QSAR and aug-MIA-QSARcolor, as well as applying them to the study of neglected diseases, in order to obtain new drug targets using chemico-biological interpretation of the MIA molecular descriptors. Four compound data sets with experimental bioactivities against Chagas disease, malaria, dengue and schistosomiasis were evaluated using three approaches: MIA-QSARt, aug-MIA-QSAR and aug-MIA-QSARcolor. In general, representations of atoms as spheres with different colors and sizes proportional to the corresponding van der Waals radii (aug-MIA approaches) improved the predictive ability and interpretability in all data sets. The use of colors proportional to the Pauling´s electronegativity showed that MIA descriptors are capable of identifying periodic properties relevant for the studied activity. Finally, solid colors instead of spotlighted atoms allowed a correct identification of atoms by means of pixel values in the studies for malaria, dengue and schistosomiasis, which were, subsequently, useful for the chemical interpretation related to the bioactivity. It can be inferred that semicarbazones and thiosemicarbazones derivative with a tri-substituted ring in R1 group and a trifluoro methyl group in the R 3 position instead of a chlorine antitripanossoma resulted in higher activity. The antimalarial activity of quinolon-4(1H)imines can be improved if: 1) R1 and R2 are electron donor groups, 2) R3 has long aminoalkyl chains, and 3) R4 possesses substituents with big atomic volume. In the study for dengue, it was found that tetrapeptides with unbranched small size amino acids in the A1 and A4 positions can increase the substrate affinity (Km) to the NS3 protein, and when in A1 and A2 positions, the substrate cleavage rate (kcat). On the other hand, acidic amino acids in the A2 and A4 positions were found to be related with low substrate affinity to the NS3 protein and when present in A1, with low substrate cleavage rate. Finally, the presence of metoxy substituents in R1 (or R2) and R5 in the neolignan backbone can favor their antischistosomal activity.

Estudo e caracterização da eletropolimerização de moléculas nanoestruturadas a Base de Schiff

Pós-graduação em Química - IBILCE

Desenvolvimento de sensores baseados em eletrodos modificados com pentacianonitrosilferratos para determinação de compostos sulfurados em gás natural

Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)

Estudo das propriedades ópticas e estruturais de espinélios do tipo 'ZNAL IND. 2 O IND. 4' contendo 'EU POT. 3+' ou 'TB POT. 3+'

Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)

Efeito de compensação de cargas nas propriedades luminescentes dos materiais 'BA''WO IND.4':'EU POT.3+','LI POT.+'

Pós-graduação em Química - IQ

Cálculos de estrutura eletrônica de materiais mediante combinação linear de orbitais atômicos

Pós-graduação em Ciência e Tecnologia de Materiais - FC

Biocompatilibidade in vivo de implantes de titânio submetidos ao processo biomimético

Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)

Exotic Bose-Einstein condensates: binary mixtures and dipolar gases

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

Medidas de espectroscopia Raman em cristais KDP e Nanotubos de Carbono: implementação da técnica

Atualmente, os físicos vêm desenvolvendo novas técnicas de caracterização de materiais, principalmente os novos materiais que os cientistas (de todas as áreas) estão produzindo a partir de outros já existentes como vidros, cerâmicas, polímeros, materiais semicondutores e supercondutores, materiais magnéticos, dentre outros. Seguindo esta linha, o Grupo de Física de Materiais da Amazônia vem adquirindo novas técnicas para caracterização de materiais e este trabalho marca o início da incorporação de mais uma técnica de caracterização junto ao laboratório de física da UFPA, a Espectroscopia Raman. Neste trabalho, utilizamos como amostras para realizar e testar a técnica implantada, cristais KH2PO4 (KDP) e nanotubos de carbono de parede simples (SWNT). O KDP foi escolhido devido ao fato de ter os espectros Raman muito conhecidos e ser um material de simples produção. O KDP puro ou dopado continua sendo alvo de pesquisa (teórica e/ou experimental) atual, principalmente por apresentar uma transição de fase ferroelétrica e ser um material que tem muitas aplicações nas indústrias que utilizam tecnologia de lasers, sensores, gerador de segundo e terceiro harmônico. Já os nanotubos de carbono também foram utilizados como amostras por ser um material de grande interesse científico, tecnológico e de grande aplicação no mundo moderno, pois podem ser empregados em nanotecnologia na produção de transistores e diodos, além disso, podem ser incorporados a certos materiais aumentando, assim, a resistência mecânica dos mesmos.Para as amostras de KDP foram realizadas medidas em temperatura ambiente, pressão uniaxial e temperatura. Nas medidas com a temperatura conseguimos observar o inicio da decomposição e de uma possível transição de fase em alta temperatura no KDP. As medidas com pressão uniaxial mostram que embora não se observe uma transição de fase bem definida é possível se identificar alteração que podem indicar o inicio de uma quebra de simetria devido aos efeitos de pressão. Nas amostras de nanotubos (nanotubos de paredes simples-SWNT) foram realizadas medidas de Raman em temperatura ambiente. Nessas medidas identificamos as bandas D e G bastante conhecidas as quais são reportadas em quase todos os artigos sobre esse tema. O mais importante foi a implantação da nova técnica que é uma técnica forte que pode ser aplicada em diferentes campos do conhecimento científico fortalecendo o Grupo de Física de Materiais da Amazônia.

Demixing and symmetry breaking in binary dipolar Bose-Einstein-condensate solitons

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

Phase separation in a spin-orbit-coupled Bose-Einstein condensate

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

Espectrometria de massa para análise isotópica dos bio-elementos

Mass spectrometry is an analytical technique widely used in several areas of academic research. It allows the knowledge of the information about the micro-world of atoms leading to significant advances in science today. The analysis of stable isotopes of carbon, hydrogen, oxygen, nitrogen and sulfur, also known as bio-elements, shows itself as a major area of interest in using the proposed method. The development of techniques and equipment coupled with mass spectrometry promises to deliver even greater progress in this field, in particular, for the biological sciences and related areas. The pyrolytic method in reduction of organic compounds at high temperatures provides simultaneous isotopic analysis of bio-elements H and O, by the gases released, H2 and CO after the pyrolitic process, significantly reducing analysis time and the amount of material to sample. This paper presents a review of mass spectrometry with its basic principles of operation, and pyrolytic method for reducing compounds at temperatures above 1400 ° C for isotopic analysis of bio-elements

Estudos sobre a aplicação do pentacloreto de nióbio na síntese de derivados de 4-aril-3,4-di- hidrocumarinas

Coumarin is a natural active compound that can be found in many plants. The coumarins have many properties such as bronchodilator, anti-inflammatory, antioxidant, anticoagulant, antibiotics, immunomodulatory, antimicrobial and antiviral, thus, they are widely used in medical applications. More recently the coumarin derivatives have attracted the interest of many research groups in the field of new materials, for example the possibility of their use as sensitizers in dye-sensitized solar cells (DSSC) and lasers. The MCRs are defined as a process in which three or more reactants are combined in the same reaction pot, resulting in products with good structural complexity a single step, in addition to economy of atoms and selectivity and is a very important feature in modern synthetic methodology. In this work we investigated the use of niobium pentachloride as catalyst of the multicomponent reactions between phenolic derivatives, various aromatic aldehydes and β-diester derivatives in the synthesis of 4-aryl-3,4-dihydrocoumarin derivatives. The reactions were carried out at room temperature, under inert atmosphere (N2), using dichloromethane anhydrous (CH2 Cl2) as solvent, with a reaction time of most 120 hours. The products were isolated by column chromatography on silica gel and submitted to spectrometric and spectroscopic analysis. The results show that NbCl5 is an excellent agent for promoting the synthesis of 4-aryl-3,4-dihydrocoumarin derivatives through multicomponent reactions, obtaining yields varying from 45 to 95%

Síntese de tetra-hidropiridinas por meio de reações multicomponentes

Multicomponent Reactions are defined as reactions between three or more reagents in a single reaction step in the same reaction vial, forming a product that includes the majority of atoms and structural characteristics of the reagents. Thus these reactions save time and energy. One of the ways to improve the yield and reaction time of a multicomponent reaction is to use different catalysts, an example of catalyst that shows great potential and has been studied in recent years is the molecular iodine is known to be a Lewis acid with high catalytic power. The functionalized piperidines, also known as tetrahydropyridines, are alkaloids that have pharmacological potential, this is due to the piperidine ring present in many natural product structures with muscarinic activity, nicotine, analgesic, antipsychotic, anti-proliferative, among others. In this paper we describe studies about on the application of molecular iodine (I2) in the multicomponent reaction between aniline derivatives, benzaldehyde and β-ketoester (methyl acetoacetate) for the synthesis of functionalized piperidines and the synthesis of a corresponding piperidone by acid hydrolysis. Data analysis allowed us to demonstrate the efficacy of molecular iodine in the synthesis of functionalized piperidines, obtaining results with yields 44-87% and short reaction time of 8 to 24 hours, and the efficacy of acid hydrolysis of enamine in the structure of the tetrahydropyridine derivative in a yield of 81%

Desenvolvimento de modelos para flavonoides e cumarinas utilizando o campo de força CGenFF

Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)