The mean and turbulence structure simulation of the monsoon trough boundary layer using a one-dimensional model with e-l and e-epsilon closures

An attempt has been made here to study the sensitivity of the mean and the turbulence structure of the monsoon trough boundary layer to the choice of the constants in the dissipation equation for two stations Delhi and Calcutta, using one-dimensional atmospheric boundary layer model with e-epsilon turbulence closure. An analytical discussion of the problems associated with the constants of the dissipation equation is presented. It is shown here that the choice of the constants in the dissipation equation is quite crucial and the turbulence structure is very sensitive to these constants. The modification of the dissipation equation adopted by earlier studies, that is, approximating the Tke generation (due to shear and buoyancy production) in the epsilon-equation by max (shear production, shear + buoyancy production), can be avoided by a suitable choice of the constants suggested here. The observed turbulence structure is better simulated with these constants. The turbulence structure simulation with the constants recommended by Aupoix et al (1989) (which are interactive in time) for the monsoon region is shown to be qualitatively similar to the simulation obtained with the constants suggested here, thus implying that no universal constants exist to regulate dissipation rate. Simulations of the mean structure show little sensitivity to the type of the closure parameterization between e-l and e-epsilon closures. However the turbulence structure simulation with e-epsilon closure is far better compared to the e-l model simulations. The model simulations of temperature profiles compare quite well with the observations whenever the boundary layer is well mixed (neutral) or unstable. However the models are not able to simulate the nocturnal boundary layer (stable) temperature profiles. Moisture profiles are simulated reasonably better. With one-dimensional models, capturing observed wind variations is not up to the mark.

Parameterized Algorithms for MAX COLORABLE INDUCED SUBGRAPH Problem on Perfect Graphs

We address the parameterized complexity ofMaxColorable Induced Subgraph on perfect graphs. The problem asks for a maximum sized q-colorable induced subgraph of an input graph G. Yannakakis and Gavril IPL 1987] showed that this problem is NP-complete even on split graphs if q is part of input, but gave a n(O(q)) algorithm on chordal graphs. We first observe that the problem is W2]-hard parameterized by q, even on split graphs. However, when parameterized by l, the number of vertices in the solution, we give two fixed-parameter tractable algorithms. The first algorithm runs in time 5.44(l) (n+#alpha(G))(O(1)) where #alpha(G) is the number of maximal independent sets of the input graph. The second algorithm runs in time q(l+o()l())n(O(1))T(alpha) where T-alpha is the time required to find a maximum independent set in any induced subgraph of G. The first algorithm is efficient when the input graph contains only polynomially many maximal independent sets; for example split graphs and co-chordal graphs. The running time of the second algorithm is FPT in l alone (whenever T-alpha is a polynomial in n), since q <= l for all non-trivial situations. Finally, we show that (under standard complexitytheoretic assumptions) the problem does not admit a polynomial kernel on split and perfect graphs in the following sense: (a) On split graphs, we do not expect a polynomial kernel if q is a part of the input. (b) On perfect graphs, we do not expect a polynomial kernel even for fixed values of q >= 2.

Plasmodium berghei glycine cleavage system T-protein is non-essential for parasite survival in vertebrate and invertebrate hosts

T-protein, an aminomethyltransferase, represents one of the four components of glycine cleavage system (GCS) and catalyzes the transfer of methylene group from H-protein intermediate to tetrahydrofolate (THF) forming N-5, N-10-methylene THF (CH2-THF) with the release of ammonia. The malaria parasite genome encodes T-, H- and L-proteins, but not P-protein which is a glycine decarboxylase generating the aminomethylene group. A putative GCS has been considered to be functional in the parasite mitochondrion despite the absence of a detectable P-protein homologue. In the present study, the mitochondrial localization of T-protein in the malaria parasite was confirmed by immunofluorescence and its essentiality in the entire parasite life cycle was studied by targeting the T-protein locus in Plasmodium berghei (Pb). PbT knock out parasites did not show any growth defect in asexual, sexual and liver stages indicating that the T-protein is dispensable for parasite survival in vertebrate and invertebrate hosts. The absence of P-protein homologue and the non-essentiality of T protein suggest the possible redundancy of GCS activity in the malaria parasite. Nevertheless, the H- and L-proteins of GCS could be essential for malaria parasite because of their involvement in alpha-lcetoacid dehydrogenase reactions. (C) 2014 Elsevier B.V. All rights reserved.

Fertilidad del suelo en tres sistemas de manejo en café (Coffea arabica L.) y su efecto en el rendimiento, Masatepe - Masaya

El objetivo de este estudio fue comparar la influencia de tres sistemas de manejo en café sobre la fertilidad física, química y biol��gica del suelo y el rendimiento en café oro en el municipio de Masatepe, departamento de Masaya, Nicaragua en el período de julio del 2009 a enero del 2010. El tratamiento uno (orgánico intensivo) estuvo conformado por dos especies leguminosas como sombra, Inga laurina (Sw.) Willd (guaba) y Samanea saman (Jacq.) Merrill (genízaro), más aplicaciones por planta de 2.27 kg de pulpa de café (9 080 kg ha-1) e igual cantidad de gallinaza. El tratamiento dos (orgánico extensivo) involucra 2.27 kg de pulpa de café bajo las mismas especies arbóreas y un tercer tratamiento a plena exposición solar (convencional extensivo) con aplicaciones por planta de 17 gramos (68 kg ha-1) de fertilizante 27-9-18 en junio, 35 gramos (140 kgha-1) de 12-30-10 en septiembre y 20 gramos (80 kg ha-1) de urea más 5 gramos (20 kg ha-1) de KCl en octubre. Se utilizó un arreglo unifactorial en diseño de bloques completo al azar, evaluándose las variables materia orgánica, nitrógeno total, capacidad de intercambio catiónico, porosidad, retención de humedad, y diversidad de la macrofauna del suelo. Se efectuaron un muestreo de suelo en el mes de julio de 2009 y otro en enero de 2010. Los resultados fueron analizados por diferencias mínimas significativas y en el caso de la macrofauna a través del índice de Shannon-Wiener. Los programas estadísticos utilizados fueron InfoStat profesional y Past versión 1.29, éste último para el análisis de la biodiversidad del suelo. No se encontraron diferencias estadísticas en los componentes de la fertilidad física y química del suelo, pero se observa una tendencia a disminuir en el sistema manejado convencionalmente. La mayor diversidad de macrofauna se presentó en los sistemas manejados orgánicamente. El rendimiento de café oro se comport ó de forma variada, siendo mejor estadísticamente el sistema convencional extensivo en el primer ciclo agrícola (2002-2003), con un rendimiento de 305kg ha-1. Posteriormente en el resto de los ciclos no se presentan diferencias significativas pero se observa un comportamiento alterno de mayor rendimiento entre el sistema orgánico intensivo y el convencional extensivo.

Sistemas de manejo en café (Coffea arabica L.) y su efecto en la fertilidad del suelo y el rendimiento del café oro, Masatepe, Masaya

El objetivo de este estudio fue comparar la influencia de tres sistemas de manejo en café sobre la fertilidad física, química y biol��gica del suelo y el rendimiento en café oro en el municipio de Masatepe, departamento de Masaya, Nicaragua en el período de julio del 2009 a enero del 2010. El tratamiento orgánico intensivo (OI) estuvo conformado por dos especies leguminosas como sombra, Inga laurina (Sw.) Willd (guaba) y Samanea saman (Jacq.) Merrill (genízaro), más aplicaciones por planta de 2.27 kg de pulpa de café (9 080 kg ha -1 ) e igual cantidad de gallinaza. El tratamiento orgánico extensivo (OE) involucra 2.27 kg de pulpa de café bajo las mismas especies arbóreas y un tercer tratamiento a plena exposición solar denominado convencional extensivo (CE) con aplicaciones por planta de 17 gramos (68 kg ha -1 ) de fertilizante 27- 9-18 en junio, 35 gramos (140 kg ha -1 ) de 12-30-10 en septiembre y 20 gramos (80 kg ha -1 ) de urea más 5 gramos (20 kg ha -1 ) de KCl en octubre. Se utilizó un arreglo unifactorial en diseño de bloques completo al azar, evaluándose las variables materia orgánica, nitrógeno total, capacidad de intercambio catiónico, porosidad, retención de humedad, y diversidad de la macrofauna del suelo. Se efectuaron un muestreo de suelo en el mes de julio de 2009 y otro en enero de 2010. Los resultados fueron analizados por diferencias mínimas significativas y en el caso de la macrofauna a través del índice de Shannon-Wiener. Los programas estadísticos utilizados fueron InfoStat profesional y Past versión 1.29, éste último para el análisis de la biodiversidad del suelo. No se encontraron diferencias estadísticas en los componentes de la fertilidad física y química del suelo, pero se observa una tendencia a disminuir en el sistema manejado convencionalmente. La mayor diversidad de macrofauna se presentó en los sistemas manejados orgánicamente. El rendimiento de café oro se comportó de forma variada, siendo mejor estadísticamente el sistema convencional extensivo en el primer ciclo agrícola (2002-2003), con un rendimiento de 305 kg ha -1 . Posteriormente en el resto de los ciclos no se presentan diferencias significativas pero se observa un comportamiento alterno de mayor rendimiento entre el sistema orgánico intensivo y el convencional extensivo.

Chemosensory response of marine flagellate towards L- and D- dissolved free amino acids generated during heavy grazing on bacteria

This study investigated the generation of dissolved free amino acids (DFAA) by the bacterivorous flagellate Rhynchomonas nasuta when feeding on abundant prey. Specifically, it examined whether this flagellate protist exhibits a chemosensory response towards those amino acids. The concentrations of glycine and the and D-enantiomers of glutamate, serine, threonine, alanine, and leucine were determined in co-cultures of the flagellate and bacteria. Glycine, L- and D-alanine, and L-serine were found to accumulate under these conditions in amounts that correlated positively with flagellate abundance, suggesting that protists are involved in their generation. Investigations of the chemotactic response of young and old foraging protists to the same amino acids, offered in concentrations similar to those previously generated, showed that glycine elicited the strongest attraction in both age groups. Young protists were strongly attracted to all the assayed amino acids, whereas older protists maintained a high level of attraction only for glycine. These results suggest that glycine generated by protists actively grazing in bacterially enriched patches functions as an infochemical, signaling to foraging protists the presence of available prey in the aquatic environment.

Efeito da L-Arginina e Glicina na parede do cólon irradiado Estudo experimental em ratos

A radioterapia é amplamente utilizada no tratamento de tumores pélvicos, incluindo os de bexiga, intestino e reto. Ela apresenta efeitos danosos, notadamente em tecidos que apresentam intensa renovação celular, sendo a mucosa intestinal altamente susceptível. Nesse contexto, a suplementação dietética com aminoácidos tem se mostrado uma terapia promissora para minimizar este dano. O objetivo desse estudo foi determinar o efeito da suplementação dietética com os aminoácidos L-arginina e glicina na estrutura da parede do cólon de ratos submetidos a irradiação abdominal. Quarenta ratos Wistar machos adultos foram distribuídos aleatoriamente em quatro grupos, cada um com dez animais: I controle não irradiado e sem suplementação de aminoácidos; II controle irradiado e sem suplementação de aminoácidos; III irradiado e suplementado com L-arginina; IV irradiado e suplementado com glicina. O período de suplementação dietética foi de 14 dias, com a irradiação ocorrendo no 8. dia do experimento. A análise estereol��gica mostrou que a irradiação provocou diminuição do volume total da parede col��nica dos animais dos grupos II e III em relação aos animais saudáveis, mas não dos ratos que receberam suplementação de glicina. A camada mucosa dos animais irradiados de todos os grupos diminuiu quando comparada com os ratos saudáveis não irradiados. Os animais irradiados que não receberam suplementação de aminoácido apresentaram diminuição da camada muscular da mucosa, quando comparados com os grupos I e IV, e o grupo de ratos suplementados com glicina apresentou aumento significativo da camada submucosa em relação aos grupos I e II. Os animais do grupo III mostraram diminuição da camada muscular própria em comparação aos grupos I e IV. A suplementação com L-arginina foi eficaz na manutenção do volume parcial do epitélio da camada mucosa. Nossos resultados sugerem que a suplementação de glicina apresentou efeitos superiores ao da suplementação com L-arginina na estrutura da parede col��nica, haja vista que foi capaz de manter a espessura da parede e a superfície epitelial da mucosa, enquanto a Larginina foi capaz de manter o volume parcial do epitélio e a superfície epitelial, mas não o volume total da parede intestinal.

野生大豆（Glycine.soja）体细胞胚胎发生及其影响因素的研究

野生大豆子叶切段、下胚轴切段、第一对未展开真叶通过悬浮培养，可以诱导产生胚状体。胚状体发育到鱼雷期中止发育，但以幼胚诱导的胚状体发育到子叶期，并进一步再生根和芽。 不同激素和培养基的作用中，2. 4-D，2.4.5-T均可诱导胚状体，NAA不能，附加BA（0.1mg/L���位下同），KT (0.1)，ABA(>0.1)，GA3 (0.2)抑制胚状体发生，在六种不同培养基中，B5培养基诱导胚状体数目最多，还原态氮是必需的，5%的蔗糖浓度不利于胚状体发生，但0.5%的蔗糖浓度则有利于胚状体发生。

水稻(Oryza sativa L. ssp japonica)幼苗根质膜蛋白质组分析

根质膜具有重要的生物学功能，它参与了根响应脱落酸（ABA）的一系列活动。尽管已经有很多有关ABA影响根的生长和发育的报道，但是在蛋白质组水平上研究参与ABA信号转导及相关活动的质膜蛋白质的报道还未见到。我们期望利用蛋白质组学技术平台研究外源ABA胁迫下水稻根质膜与ABA功能相关的蛋白质组的变化。 本论文通过双向电泳（2DE）结合质谱（MALDI-TOF MS 和 MALDI-TOF/TOF MS）分析的方法鉴定了102个质膜相关蛋白质。这些蛋白质功能涉及到跨膜运输（16.2%）、胁迫反应（14.3%）、物质运输（4.8%）、细胞骨架动态变化（5.7%）、细胞壁重建（3.8%）、碳代谢和能量循环（13.3%）、蛋白质代谢（14.3%）、信号转导（18.1%）和其他功能的蛋白质（4.8%），以及未知功能的蛋白质（2.9%）。其中大约30％的蛋白质以同工型的形式存在。在这些鉴定结果中，有10个斑点（代表10种蛋白质）已被报道为质膜特异的蛋白质;68个蛋白质斑点（代表58种蛋白质）是质膜相关蛋白质。其余54个蛋白质斑点（代表42种蛋白质）是首次在水稻根的质膜囊泡中被鉴定出来。 在ABA处理条件下，我们在2DE胶上发现了15个响应ABA调节的蛋白质斑点。9个上调的蛋白质斑点分别代表以下9种蛋白质：vacuolar proton-ATPase A subunit, vacuolar ATPase B subunit、patatin、 Salt-stress root protein RS1、谷氨酰氨合成酶（Glutamine synthetase，GS）、OSR40c1、H+-exporting ATPase （vacuolar ATPase E subunit）、甘油醛-3-磷酸脱氢酶I型（glyceraldehyde-3- phosphate dehydrogenase, type I，GADPH）和醛缩酶C-1（aldolase C-1）。6个下调的蛋白质斑点分别代表4种蛋白质：endosperm lumenal binding protein、remorin protein、富含脯氨酸蛋白质（glycine-rich protein，GRP）和蔗糖合成酶（sucrose synthase, SuSy）。其中，OSR40c1和endosperm lumenal binding protein与蛋白质合成相关，从它们与ABA的关系中可以看出，ABA可能抑制了细胞的蛋白质合成。而vacuolar proton-ATPase A subunit、vacuolar ATPase B subunit和 H+-exporting ATPase参与了细胞质pH的调控，ABA致使了细胞质pH的上升。甘油醛-3-磷酸脱氢酶I型、醛缩酶C-1和蔗糖合酶参与了细胞壁的生长发育，ABA的作用可能导致了细胞壁生长发育的延迟。ABA促使Patatin上升，其作用可能与质膜膜脂的降解有关。而ABA的刺激也使谷氨酰氨合成酶的表达显著上升，谷氨酰氨合成酶可以去除细胞内有害的游离NH+4。同时还有未知功能的富含脯氨酸蛋白质（glycine-rich protein，GRP）同样受到ABA的诱导，但具体的功能及其与ABA的关系还要进一步的实验证据。

Glycine receptor activation regulates short-term plasticity in CA1 area of hippocampal slices of rats

Functional glycine receptors (GlyRs) are enriched in the hippocampus, but their roles in synaptic transmission are unclear. In this study, we examined the effect of GlyR activation on paired-pulse stimulation of the whole-cell postsynaptic currents (PSCs)

Glycine uptake regulates hippocampal network activity via glycine receptor-mediated tonic inhibition

Functional glycine receptors (GlyRs) are enriched in the hippocampus, but their role in hippocampal function remains unclear. Since the concentration of ambient glycine is determined by the presence of powerful glycine transporter (GlyT), we blocked the r

L-shell ionization accompanied by one-electron capture in Cq+, Oq+ (q=2,3)-Ne collisions

The L-shell ionization processes of a Ne gas target associated with single-electron capture by bombardment of Cq+ and Oq+ (q=2,3) are investigated using the projectile-recoil-ion coincidence method in the energy range from 80 to 400 keV/u (v(p)=1.8-4 a.u.). The cross-section ratios (R-k1) of k-fold ionization to single capture are compared with the results for He2+-Ne collisions by Dubois [Phys. Rev. A 36, 2585 (1987)]. All the velocity dependences are quite similar. The ratios increase as the projectile energy increases in the lower-energy region, reach the maxima for projectile energies around E-max=160q(1/2) keV/u, and then decrease at higher energies. These results qualitatively agree with our calculations in terms of the Bohr-Lindhard model within the independent-electron approximation.

A Biodegradable Diblcok Copolymer Poly(ethylene glycol)-block-poly(L-lactide-co-2-methyl-2-carboxyl-propylene carbonate): Docetaxel and RGD Conjugation

A diblcok copolymer monomethoxy poly (ethylene glycol)-block-poly(L-lactide-co-2-methyl-2-carboxyl-propylene carbonate) (MPEG-b-P(LA-co-MCC)) was obtained by copolymerization of L-lactide (LA) and 2-methyl-2-benzoxycarbonyl-propylene carbonate (MBC) and subsequent catalytic hydrogenation. The pendant carboxyl groups of the copolymer MPEG-b-P(LA-co-MCC) were conjugated with antitumor drug docetaxel and tripeptide arginine-glycine-aspartic acid (RGD), respectively.

Synthesis and characterization of RGD peptide grafted poly(ethylene glycol)-b-poly(L-lactide)-b-poly(L-glutamic acid) triblock copolymer

Advances in tissue engineering require biofunctional scaffolds that can provide not only physical support for cells but also chemical and biological cues needed in forming functional tissues. To achieve this goal, a novel RGD peptide grafted poly(ethylene glycol)-b-poly(L-lactide)-b-poly(L-glutamic acid) (PEG-PLA-PGL/RGD) was synthesized in four steps (1) to prepare diblock copolymer PEG-PLA-OH and to convert its -OH end group into -NH2 (to obtain PEG-PLA-NH2), (2) to prepare triblock copolymer PEG-PLA-PBGL by ring-opening polymerization of NCA (N-carboxyanhydride) derived from benzyl glutamate with diblock copolymer PEG-PLA-NH2 as macroinitiator, (3) to remove the protective benzyl groups by catalytic hydrogenation of PEGPLA-PBGL to obtain PEG-PLA-PGL, and (4) to react RGD (arginine-glycine-(aspartic amide)) with the carboxyl groups of the PEG-PLA-PGL. The structures of PEG-PLA-PGL/RGD and its precursors were confirmed by H-1 NMR, FT-IR, amino acid analysis, and XPS analysis. Addition of 5 wt % PEG-PLA-PGL/RGD into a PLGA matrix significantly improved the surface wettability of the blend films and the adhesion and proliferation behavior of human chondrocytes and 3T3 cells on the blend films. Therefore, the novel RGD-grafted triblock copolymer is expected to find application in cell or tissue engineering.

Albucasis, Traitier de Cyrurgie: Edition de la traduction en ancien fran?ais de la Chirurgie d'Abu'l Qasim Halaf Ibn ?Abbas al-Zahrawi du manuscrit BNF, fran?ais 1318.

Trotter, David, Albucasis, Traitier de Cyrurgie: Edition de la traduction en ancien fran?ais de la Chirurgie d'Abu'l Qasim Halaf Ibn ?Abbas al-Zahrawi du manuscrit BNF, fran?ais 1318 (Niemeyer, 2005)