Status of Endangered and Threatened Sand Area Species of the Illinois Flora

This study was undertaken to determine the distribution and habitat requirements of many of the endangered and threatened plant species associated with the sand deposits of Illinois. Approximately 70 species of endangered and threatened plants are known to grow in these deposits. The habitat fidelity and natural community types were determined for 40 of these species that are restricted to these glacial drift sand habitats. Plant community types, associated species, moisture requirements, and other data concerning each of the plant species were determined by reviewing the pertinent literature, searching the Illinois Department of Natural Resources Natural Heritage Database, through discussions with botanists and natural heritage biologists, examination of herbarium specimens, and our studies of the vegetation of the Illinois sand deposits. Throughout the course of these studies, most of the nature preserves, state parks, and identified natural areas in the sand regions were visited on numerous occasions and vegetation surveys undertaken. The information presented in this paper could allow rare plant conservation in Illinois to become more proactive by encouraging the selection of sites where in situ conservation efforts could be conducted by state, local, and nongovernmental organizations.

DIFFERENTIATION OF ARBOREAL VEGETATION IN THREE SECTORS OF A FOREST FRAGMENT RELATED TO ITS HISTORICAL DISTURBANCES

Forest fragmentation is one of the main causes of biodiversity loss, directly affecting the ecological processes. This study aimed to evaluate tree diversity, structure, and composition parameters in three sectors of a forest fragment with distinct disturbance records. The arboreal vegetation was evaluated in twenty-four 10 × 10 m plots, sampling a total of 1,228 living individuals. We calculated Shanon’s diversity index, Pielou’s equability, and jackknife estimators of first and second orders. The sampled individuals were distributed in diameter classes and the importance value (VI) was calculated for each species. It was made a Detrended Correspondence Analysis (DCA) to verify whether there were significant distinctions between the sectors. It was noticed that the sector where there was clear cutting and vegetation burning in a recent past had higher abundance and richness but also the worst equability. That corresponds to the effects of perturbation as confirmed by the tree diameters and the presence of species of greater importance value. The sector that had no record of disturbance, situated in a location with greater variety of microenvironments, presented diversity, structure, and composition consistent with a no disturbance scenario. The other sector, which did not have clear cutting, was subjected to cattle trampling presented ecological parameters consistent with the absence of major disturbances. On the other hand, this third sector had the smallest environmental diversity, which puts this last sector in an intermediate situation.

Changements climatiques et écologiques dans le nord de l’Alaska au cours de la glaciation du Wisconsinien : le Yedoma de la rivière Itkillik

Le climat continental et froid de la Béringie lors de la glaciation du Wisconsinien a conduit à la formation d’une forme relique de pergélisol syngénétique nommé yedoma. Ces dépôts ont permis la préservation d’indicateurs environnementaux très diversifiés qui peuvent être employés pour reconstituer la dynamique climatique et écologique de la Béringie avant le dernier maximum glaciaire. À ce jour, peu d’études ont été réalisées au nord de la chaîne de montagnes Brooks (Alaska) et l’hétérogénéité écologique régionale de la Béringie Est lors de la glaciation du Wisonsinien reste mal définie. Ce mémoire porte sur une reconstitution paléoenvironnementale de plus de 39 ka du nord de l’Alaska réalisée à partir de sédiments provenant du Yedoma de la rivière Itkillik. Les objectifs sont (1) de reconstituer l’histoire de la végétation avec l’analyse pollinique; (2) de reconstituer les températures de juillet, le contraste de température saisonnier et l’ensoleillement de juillet avec la technique des analogues modernes et (3) de mettre les données biogéochimiques et glaciologiques du site en lien avec le climat reconstitué. L’étude montre que vers 35 ka BP (Interstade du Wisconsinien Moyen), des conditions climatiques semblables à l’actuel ont favorisé l’accumulation de tourbe riche en carbone organique. À partir de 29,7 ka BP, les températures de juillet reconstituées diminuent, alors que la continentalité du climat semble augmenter. Le contenu en glace des sédiments est plus alors plus faible et la pluie pollinique devient dominée par Poaceae, Artemisia et autres herbacés non graminoïdes. Ces indicateurs suggèrent des conditions environnementales plus xériques qu’aujourd’hui. Les anomalies isotopiques de 18O, 2H et l’excès de deutérium confirment un épisode d’avancée glaciaire (Wisconsinien Tardif). Après 17,9 ka BP (Tardiglaciaire), les températures de juillet et le contraste saisonnier augmentent. Les valeurs de contenu en carbone organique des sédiments sont plus élevées et la plus grande disponibilité en eau favorise l’établissement d’un couvert herbacé moderne dominé par les Cyperaceae.

Conceptual design for fully autonomous aerial and ground system for precision agriculture

There are few regulatory restrictions involving the use of fully autonomous unmanned aerial systems in unpopulated, farming areas of Australia. The combination of a fully autonomous aerial and ground systems would provide efficient and cost effective retrieval of soil and vegetation data for use in precision agriculture. The aerial system will survey the site and collect spectral imagery to analyse plant density, stress and nutrition. The ground sensors will collect soil moisture content readings throughout the site. The data from both systems will be collated at a central base station. The base station will also provide housing and interface with the aerial system.

Associations between outdoor fungal spores and childhood and adolescent asthma hospitalisations.

BACKGROUND: Childhood asthma is a significant public health problem and severe exacerbations can result in diminished quality of life and hospitalisation. OBJECTIVE: To examine the contribution of outdoor fungi to childhood and adolescent asthma hospitalisations. METHODS: The Melbourne Air Pollen Children and Adolescent (MAPCAH) study is a case-crossover study of 644 children and adolescents (aged 2-17 years) hospitalised for asthma. MAPCAH collected individual data on human rhinovirus (HRV) infection and sensitisation to Alternaria and Cladosporium; and daily counts of ambient concentrations of fungal spores, pollen and air pollutants. Conditional logistic regression models were used to assess associations with increases in spore counts while controlling for potential confounding and testing interactions. RESULTS: Exposure to Alternaria (aOR=1.07, 95%CI 1.03-1.11), Leptosphaeria (aOR=1.05, 95%CI 1.02-1.07), Coprinus (aOR=1.04, 95%CI 1.01-1.07), Drechslera (aOR=1.03, 95%CI1.00-1.05) and total spores (aOR=1.05, 95%CI 1.01-1.09) were significantly associated with child asthma hospitalisations independent of HRV infection. There were significant lagged effects up to 3-days with Alternaria, Leptosphaeria, Cladosporium, Sporormiella, Coprinus, and Drechslera. Some of these associations were significantly greater in participants with Cladosporium sensitisation. CONCLUSION: Exposures to several outdoor fungal spore taxa, including some not reported in previous research, are associated with the risk of child and adolescent asthma hospitalisation, particularly in individuals sensitised to Cladosporium. We need further studies to examine cross-reactivity causing asthma exacerbations. Identifying sensitisation to multiple fungal allergens in asthmatic children could support the design and implementation of more effective strategies to prevent asthma exacerbations.

A critical review of habitat use by feral cats and key directions for future research and management

Feral cats (Felis catus) have a wide global distribution and cause significant damage to native fauna. Reducing their impacts requires an understanding of how they use habitat and which parts of the landscape should be the focus of management. We reviewed 27 experimental and observational studies conducted around the world over the last 35 years that aimed to examine habitat use by feral and unowned cats. Our aims were to: (1) summarise the current body of literature on habitat use by feral and unowned cats in the context of applicable ecological theory (i.e. habitat selection, foraging theory); (2) develop testable hypotheses to help fill important knowledge gaps in the current body of knowledge on this topic; and (3) build a conceptual framework that will guide the activities of researchers and managers in reducing feral cat impacts. We found that feral cats exploit a diverse range of habitats including arid deserts, shrublands and grasslands, fragmented agricultural landscapes, urban areas, glacial valleys, equatorial to sub-Antarctic islands and a range of forest and woodland types. Factors invoked to explain habitat use by cats included prey availability, predation/competition, shelter availability and human resource subsidies, but the strength of evidence used to support these assertions was low, with most studies being observational or correlative.Wetherefore provide a list of key directions that will assist conservation managers and researchers in better understanding and ameliorating the impact of feral cats at a scale appropriate for useful management and research. Future studies will benefit from employing an experimental approach and collecting data on the relative abundance and activity of prey and other predators. This might include landscape-scale experiments where the densities of predators, prey or competitors are manipulated and then the response in cat habitat use is measured. Effective management of feral cat populations could target high-use areas, such as linear features and structurally complex habitat. Since our review shows often-divergent outcomes in the use of the same habitat components and vegetation types worldwide, local knowledge and active monitoring of management actions is essential when deciding on control programs.

Analysis of trade-offs between biodiversity, carbon farming and agricultural development in northern Australia reveals the benefits of strategic planning

Australia's northern savannas are one of the few remaining large and mostly intact natural areas on Earth. However, their biodiversity and ecosystem values could be threatened if proposed agricultural development proceeds. Through land-use change scenarios, we explored trade-offs and synergies among biodiversity conservation, carbon farming and agriculture production in northern Australia. We found that if all suitable soils were converted to agriculture, habitat at unique recorded locations of three species would disappear and 40 species and vegetation communities could lose more than 50% of their current distributions. Yet, strategically considering agriculture and biodiversity outcomes leads to zoning options that could yield >56,000 km2 of agricultural development with a significantly lower impact on biodiversity values and carbon farming. Our analysis provides a template for policy-makers and planners to identify areas of conflict between competing land-uses, places to protect in advance of impacts, and planning options that balance agricultural and conservation needs.

Lizard responses to forest fire and timber harvesting: complementary insights from species and community approaches

Understanding the relationship between community composition and ecosystem function is essential for managing forests with complex disturbance regimes. Studies of animal responses to fire and timber harvesting in forest ecosystems typically focus on a single level of community diversity. Measures of species abundance and diversity at the community level, along with measures of functional diversity that incorporate information on species traits, provide opportunities for complementary insights into biodiversity responses to disturbances. We quantified community and functional responses of a temperate forest lizard community to fire and rotational logging using metrics including species-specific abundance, community abundance, species richness and evenness, as well as trait-based measures of functional diversity. We used non-linear regression models to examine the relationships between reptile data and time since fire and timber harvesting, using sites arrayed along a 30-years post-disturbance chronosequence. We modelled responses separately in two major vegetation types: coastal Banksia woodland and lowland eucalypt forests. Species and community measures offered different insights into the role of fire and logging. Species responses to disturbance differed between disturbance type and vegetation type. Four species exhibited significant population responses to either fire or timber harvesting, while the rest were unaffected by either disturbance. At the community level, species richness and community abundance increased significantly with time since fire in woodland vegetation. In forest vegetation, community abundance decreased with time since fire. Surprisingly, community evenness and functional diversity did not show marked responses to fire or timber harvesting. This is likely a result of trait homogeneity and the asynchrony in species responses to disturbance. We advocate using multiple measures of community composition - incorporating species-specific information, community metrics and functional traits - to ensure a more holistic understanding of disturbance ecology in forest landscapes.

Coastal lagoons and their watersheds as GWDE: a case study in the southwest coast of Portugal

The study of groundwater dependent ecosystems opened the opportunity to involve specialists of different areas of knowledge in order to obtain answers for complex interrelations between groundwater and the associated ecosystems. The actual study, carried out in two coastal lagoons of the Portuguese SW coast, showed the high dependency of the marine life and vegetation of the lagoons and associated streams discharging in the lagoons on the fresh water supply of these two lagoons and the high contribution they receive from groundwater in the dry period, which corresponds to more than half of each hydrologic year. Every year, the lagoons are artificially opened to the ocean for a few days to a few weeks, which dramatically changes the inside salinity. The sensitivity of these ecological niches is demonstrated by the strong dependence that some species that are more sensitive to high salinity waters show in relation to the entrance of freshwater resultant from the discharge of the phreatic aquifer of Sines sedimentary Basin. The great biodiversity of these lagoons and its precarious balance is only possible to preserve if the aquifer continue to act as a regulatory factor of the lagoon’s salinity. The equilibrium can be changed in the event of overexploitation of the phreatic aquifer, which is not at risk in the near future. In a scenario of climate change the lagoons will benefit from a slow increase in groundwater contribution, due to the rise of sea level, which will be accompanied by a rise in groundwater levels in the aquifer near the sea.

Land use and environmental factors affecting red-legged partridge (Alectoris rufa) hunting yields in southern Spain

The red-legged partridge is a small game species widely hunted in southern Spain. Its commercial use has important socioeconomic effects in rural areas where other agrarian uses are of marginal importance. The aims of the present work were to identify areas in Andalusia (southern Spain) where game yields for the red-legged partridge reach high values and to establish the environmental and land use factors that determine them. We analysed 32,134 annual hunting reports (HRs) produced by 6,049 game estates during the hunting seasons 1993/1994 to 2001/2002 to estimate the average hunting yields of red-legged partridge in each Andalusian municipality (n=771). We modelled the favourability for obtaining good hunting yields using stepwise logistic regression on a set of climatic, topographical, land use and vegetation variables that were available as digital coverages or tabular data applied to municipalities. Good hunting yields occur mainly in plain areas located in the Guadalquivir valley, at the bottom of Betic Range and in the Betic depressions. Favourable areas are related to highly mechanised, lowelevation areas mainly dedicated to intensive dry crops. The most favourable areas predicted by our model are mainly located in the Guadalquivir valley.

Allergenic profile of Quercus rotundifolia pollen in Alentejo, Portugal

Background and Aim: Grasses and olive are the most relevant allergenic species in the Alentejo region. However, aggravation of allergic symptoms has been reported in the early spring, before grass and olive pollen seasons. Quercus pollen is the most abundant pollen type in the early spring in Alentejo, nonetheless its allergen profile has not yet been evaluated. The aim of this work was to characterize the allergen profile of pollen from Quercus rotundifolia among the most representative species showing pollination in April, prior to the main pollen season in Alentejo. Methods: Pollen from Quercus rotundifolia, Olea europaea and Dactylis glomerata was extracted with ammonium bicarbonate buffer, lyophilized and stored at -80ºC until analysis. Extract from Quercus ilex pollen was kindly offered by Bial. Protein content was determined by the Bradford method. SDS-PAGE followed by western blot, using allergic patient sera (obtained from the Hospital do Espírito Santo de Évora – HESE), were performed to evaluate the allergen profile of the pollen. Sensitization and cross-reactivity was assessed by solid phase immunoblot. Results: Most of the patient evidenced sensitization to pollen extracts of Q. rotundifolia. Protein profile of Q. rotundifolia has shown several bands in the Mr 10-90 kDa, mostly overlapping with Q. ilex. Western blot have shown several immunoreactive bands. Immunoreactive bands were also observed in the protein profile according to the pI in the range 4.0-6.1. Cross-reactivity between Q. rotundifolia with O. europaea and D. glomerata was found. Conclusion: These results evidenced allergens found in Q. rotundifolia pollen. It also shows that protein profile of Q. rotundifolia and Q. ilex are mostly alike suggesting that similarities in allergen profile are expected. Moreover, cross–reactivity between Q. rotundifolia and highly allergenic species such as O. europaea and D. glomerata was found which probably contributes to the aggravation of pollinosis in the early spring. Acknowledgments: This work was supported by FEDER through the “Programa Operacional Fatores de Competitividade – COMPETE” (Strategic projects of ICAAM and ICT 2013-2015). We also aknowledge Bial-Aristegui for supplying pollen and extract samples of Q. ilex.

Development of a sewerage infrastructure buffer assessment tool for local authorities

Urban expansion continues to encroach on existing or newly implemented sewerage infrastructure. In this context, legislation and guidelines, both national and international, provide limited direction to the amenity allocation of appropriate buffering distances for land use planners and infrastructure providers. A review of published literature suggests the dominant influences include topography, wind speed and direction, temperature, humidity, existing land uses and vegetation profiles. A statistical criteria review of these factors against six years of sewerage odour complaint data was undertaken to ascertain their influence and a complaint severity hierarchy was established. These hierarchical results suggested the main criteria were: topographical location, elevation relative to the odour source and wind speed. Establishing a justifiable criterion for buffer zone allocations will assist in analytically determining a basis for buffer separations and will assist planners and infrastructure designers in assessing lower impact sewerage infrastructure locations.

Aerial image analysis using spiking neural networks with application to power line corridor monitoring

Trees, shrubs and other vegetation are of continued importance to the environment and our daily life. They provide shade around our roads and houses, offer a habitat for birds and wildlife, and absorb air pollutants. However, vegetation touching power lines is a risk to public safety and the environment, and one of the main causes of power supply problems. Vegetation management, which includes tree trimming and vegetation control, is a significant cost component of the maintenance of electrical infrastructure. For example, Ergon Energy, the Australia’s largest geographic footprint energy distributor, currently spends over $80 million a year inspecting and managing vegetation that encroach on power line assets. Currently, most vegetation management programs for distribution systems are calendar-based ground patrol. However, calendar-based inspection by linesman is labour-intensive, time consuming and expensive. It also results in some zones being trimmed more frequently than needed and others not cut often enough. Moreover, it’s seldom practicable to measure all the plants around power line corridors by field methods. Remote sensing data captured from airborne sensors has great potential in assisting vegetation management in power line corridors. This thesis presented a comprehensive study on using spiking neural networks in a specific image analysis application: power line corridor monitoring. Theoretically, the thesis focuses on a biologically inspired spiking cortical model: pulse coupled neural network (PCNN). The original PCNN model was simplified in order to better analyze the pulse dynamics and control the performance. Some new and effective algorithms were developed based on the proposed spiking cortical model for object detection, image segmentation and invariant feature extraction. The developed algorithms were evaluated in a number of experiments using real image data collected from our flight trails. The experimental results demonstrated the effectiveness and advantages of spiking neural networks in image processing tasks. Operationally, the knowledge gained from this research project offers a good reference to our industry partner (i.e. Ergon Energy) and other energy utilities who wants to improve their vegetation management activities. The novel approaches described in this thesis showed the potential of using the cutting edge sensor technologies and intelligent computing techniques in improve power line corridor monitoring. The lessons learnt from this project are also expected to increase the confidence of energy companies to move from traditional vegetation management strategy to a more automated, accurate and cost-effective solution using aerial remote sensing techniques.

Engaging the metaphorical city : Brisbane male fiction 1975-2007

Brisbane writers and writing are increasingly represented as important to the city’s identity as a site of urban cool, at least in marketing and public relations paradigms. It is therefore remarkable that recent Brisbane fiction clings strongly to a particular relationship to the climatic and built environment that is often located in the past and which seemingly turns away, or at least elides, the ‘new’ technologically-driven Brisbane. Literary Brisbane is often depicted in the context of nostalgia for the Brisbane that once was—a tropical, timbered, luxuriant city in which sex is associated with heat, and, in particular, sweat. In this writing sweat can produced by adrenaline or heat, but in particular, in Brisbane novels, it is the sweat of sex that characterises the literary city. Given that Brisbane is in fact a subtropical city, it is interesting that metaphors of a tropical climate and vegetation occur so frequently in Brisbane stories (and narratives set in other parts of the state) that writer Thea Astley was prompted at one point to remark that Queensland writing was in danger of developing into a tropical cliché.

The evolutionary history of cockatoos (Aves: Psittaciformes: Cacatuidae)

Cockatoos are the distinctive family Cacatuidae, a major lineage of the order of parrots (Psittaciformes) and distributed throughout the Australasian region of the world. However, the evolutionary history of cockatoos is not well understood. We investigated the phylogeny of cockatoos based on three mitochondrial and three nuclear DNA genes obtained from 16 of 21 species of Cacatuidae. In addition, five novel mitochondrial genomes were used to estimate time of divergence and our estimates indicate Cacatuidae diverged from Psittacidae approximately 40.7 million years ago (95% CI 51.6–30.3 Ma) during the Eocene. Our data shows Cacatuidae began to diversify approximately 27.9 Ma (95% CI 38.1–18.3 Ma) during the Oligocene. The early to middle Miocene (20–10 Ma) was a significant period in the evolution of modern Australian environments and vegetation, in which a transformation from mainly mesic to xeric habitats (e.g., fire-adapted sclerophyll vegetation and grasslands) occurred. We hypothesize that this environmental transformation was a driving force behind the diversification of cockatoos. A detailed multi-locus molecular phylogeny enabled us to resolve the phylogenetic placements of the Palm Cockatoo (Probosciger aterrimus), Galah (Eolophus roseicapillus), Gang-gang Cockatoo (Callocephalon fimbriatum) and Cockatiel (Nymphicus hollandicus), which have historically been difficult to place within Cacatuidae. When the molecular evidence is analysed in concert with morphology, it is clear that many of the cockatoo species’ diagnostic phenotypic traits such as plumage colour, body size, wing shape and bill morphology have evolved in parallel or convergently across lineages.