The embryonic development of the bodywall and nervous system of the cestode flatworm Hymenolepis diminuta

Cestodes (tapeworms) are a derived, parasitic clade of the phylum Platyhelminthes (flatworms). The cestode body wall represents an adaptation to its endoparasitic lifestyle. The epidermis forms a nonciliated syncytium, and both muscular and nervous system are reduced. Morphological differences between cestodes and free-living flatworms become apparent already during early embryogenesis. Cestodes have a complex life cycle that begins with an infectious larva, called the oncosphere. In regard to cell number, cestode oncospheres are among the simplest multicellular organisms, containing in the order of 50-100 cells. As part of our continuing effort to analyze embryonic development in flatworms, we describe here the staining pattern obtained with acTub in embryos and larvae of the cestode Hymenolepis diminuta and, briefly, the monogenean Neoheterocotyle rhinobatidis. In addition, we labeled the embryonic musculature of Hymenolepis with phalloidin. In Hymenolepis embryos, two different cell types that we interpret as neurons and epidermal gland cells express acTub. There exist only two neurons that develop close to the midline at the anterior pole of the embryo. The axons of these two neurons project posteriorly into the center of the oncosphere, where they innervate the complex of muscles that is attached to the booklets. In addition to neurons, acTub labels a small and invariant set of epidermal gland cells that develop at superficial positions, anteriorly adjacent to the neurons, in the dorsal midline, and around the posteriorly located hooklets. During late stages of embryogenesis they spread and form a complete covering of the embryo. We discuss these data in the broader context of platyhelminth embryology.

Using siting algorithms in the design of marine reserve networks

Using benthic habitat data from the Florida Keys (USA), we demonstrate how siting algorithms can help identify potential networks of marine reserves that comprehensively represent target habitat types. We applied a flexible optimization tool-simulated annealing-to represent a fixed proportion of different marine habitat types within a geographic area. We investigated the relative influence of spatial information, planning-unit size, detail of habitat classification, and magnitude of the overall conservation goal on the resulting network scenarios. With this method, we were able to identify many adequate reserve systems that met the conservation goals, e.g., representing at least 20% of each conservation target (i.e., habitat type) while fulfilling the overall aim of minimizing the system area and perimeter. One of the most useful types of information provided by this siting algorithm comes from an irreplaceability analysis, which is a count of the number of, times unique planning units were included in reserve system scenarios. This analysis indicated that many different combinations of sites produced networks that met the conservation goals. While individual 1-km(2) areas were fairly interchangeable, the irreplaceability analysis highlighted larger areas within the planning region that were chosen consistently to meet the goals incorporated into the algorithm. Additionally, we found that reserve systems designed with a high degree of spatial clustering tended to have considerably less perimeter and larger overall areas in reserve-a configuration that may be preferable particularly for sociopolitical reasons. This exercise illustrates the value of using the simulated annealing algorithm to help site marine reserves: the approach makes efficient use of;available resources, can be used interactively by conservation decision makers, and offers biologically suitable alternative networks from which an effective system of marine reserves can be crafted.

Product form approximations for highly linear loss networks with trunk reservation

Admission controls, such as trunk reservation, are often used in loss networks to optimise their performance. Since the numerical evaluation of performance measures is complex, much attention has been given to finding approximation methods. The Erlang Fixed-Point (EFP) approximation, which is based on an independent blocking assumption, has been used for networks both with and without controls. Several more elaborate approximation methods which account for dependencies in blocking behaviour have been developed for the uncontrolled setting. This paper is an exploratory investigation of extensions and synthesis of these methods to systems with controls, in particular, trunk reservation. In order to isolate the dependency factor, we restrict our attention to a highly linear network. We will compare the performance of the resulting approximations against the benchmark of the EFP approximation extended to the trunk reservation setting. By doing this, we seek to gain insight into the critical factors in constructing an effective approximation. (C) 2003 Elsevier Ltd. All rights reserved.

Database technologies for l-system simulations in virtual plant applications on bioinformatics

One of the most important advantages of database systems is that the underlying mathematics is rich enough to specify very complex operations with a small number of statements in the database language. This research covers an aspect of biological informatics that is the marriage of information technology and biology, involving the study of real-world phenomena using virtual plants derived from L-systems simulation. L-systems were introduced by Aristid Lindenmayer as a mathematical model of multicellular organisms. Not much consideration has been given to the problem of persistent storage for these simulations. Current procedures for querying data generated by L-systems for scientific experiments, simulations and measurements are also inadequate. To address these problems the research in this paper presents a generic process for data-modeling tools (L-DBM) between L-systems and database systems. This paper shows how L-system productions can be generically and automatically represented in database schemas and how a database can be populated from the L-system strings. This paper further describes the idea of pre-computing recursive structures in the data into derived attributes using compiler generation. A method to allow a correspondence between biologists' terms and compiler-generated terms in a biologist computing environment is supplied. Once the L-DBM gets any specific L-systems productions and its declarations, it can generate the specific schema for both simple correspondence terminology and also complex recursive structure data attributes and relationships.

Experimental study of phase equilibria in the PbO-ZnO-"Fe2O3"-(CaO+SiO2) system in air for the lead and zinc blast furnace sinters (CaO/SiO2 weight ratio of 0.933 and PbO/(CaO+SiO2) ratios of 2.0 and 3.2)

Experimental studies on phase equilibria and liquidus in the multicomponent system PbO-ZnO-CaO-SiO2-FeO-Fe2O3 in air have been conducted over the temperature range between 1323 K (1050 degreesC) and 1623 K (1350 degreesC) to characterize the phase relations of the complex slag systems encountered in lead and zinc blast furnace sinters. The liquidus in two pseudoternary sections ZnO-Fe2O3-(PbO + CaO + SiO2) with the CaO/SiO2 weight ratio of 0.933 and PbO/(CaO + SiO2) weight ratios of 2.0 and 3.2 have been constructed.

Learning the dynamics of embedded clauses

Recent work by Siegelmann has shown that the computational power of recurrent neural networks matches that of Turing Machines. One important implication is that complex language classes (infinite languages with embedded clauses) can be represented in neural networks. Proofs are based on a fractal encoding of states to simulate the memory and operations of stacks. In the present work, it is shown that similar stack-like dynamics can be learned in recurrent neural networks from simple sequence prediction tasks. Two main types of network solutions are found and described qualitatively as dynamical systems: damped oscillation and entangled spiraling around fixed points. The potential and limitations of each solution type are established in terms of generalization on two different context-free languages. Both solution types constitute novel stack implementations - generally in line with Siegelmann's theoretical work - which supply insights into how embedded structures of languages can be handled in analog hardware.

The Lake Tekapo experiment (LTEX): An investigation of atmospheric boundary layer processes in complex terrain

A research program on atmospheric boundary layer processes and local wind regimes in complex terrain was conducted in the vicinity of Lake Tekapo in the southern Alps of New Zealand, during two 1-month field campaigns in 1997 and 1999. The effects of the interaction of thermal and dynamic forcing were of specific interest, with a particular focus on the interaction of thermal forcing of differing scales. The rationale and objectives of the field and modeling program are described, along with the methodology used to achieve them. Specific research aims include improved knowledge of the role of surface forcing associated with varying energy balances across heterogeneous terrain, thermal influences on boundary layer and local wind development, and dynamic influences of the terrain through channeling effects. Data were collected using a network of surface meteorological and energy balance stations, radiosonde and pilot balloon soundings, tethered balloon and kite-based systems, sodar, and an instrumented light aircraft. These data are being used to investigate the energetics of surface heat fluxes, the effects of localized heating/cooling and advective processes on atmospheric boundary layer development, and dynamic channeling. A complementary program of numerical modeling includes application of the Regional Atmospheric Modeling System (RAMS) to case studies characterizing typical boundary layer structures and airflow patterns observed around Lake Tekapo. Some initial results derived from the special observation periods are used to illustrate progress made to date. In spite of the difficulties involved in obtaining good data and undertaking modeling experiments in such complex terrain, initial results show that surface thermal heterogeneity has a significant influence on local atmospheric structure and wind fields in the vicinity of the lake. This influence occurs particularly in the morning. However, dynamic channeling effects and the larger-scale thermal effect of the mountain region frequently override these more local features later in the day.

Genomovar diversity amongst Burkholderia cepacia complex isolates from an Australian adult cystic fibrosis unit

In this study, a combination of recA-based PCR assays and 16S rDNA restriction fragment length polymorphism (RFLP) analysis was used to determine the genomovar diversity of clinical Burkholderia cepacia complex isolates. Twenty-eight isolates were prospectively collected from patients attending a large Australian adult cystic fibrosis (CF) unit, 22 isolates were referred from other Australian CF units and a further eight isolates originated from patients without CF. The 28 prospectively collected isolates were distributed amongst the following genomovars: Burkholderia cepacia genomovar I (28.6%), Burkholderia multivorans (21.4%), Burkholderia cepacia genomovar III (39.3%), Burkholderia vietnamiensis (3.6%) and Burkholderia ambifaria (7.1%). The results of this study highlight the usefulness of 16S rDNA RFLP typing for the identification of other Burkholderia spp. and non-fermenting gram-negative bacteria.

Instrumentation used to measure residential magnetic fields and currents

The equipment used to measure magnetic fields and, electric currents in residences is described. The instrumentation consisted of current transformers, magnetic field probes and locally designed and, built signal conditioning modules. The data acquisition system was capable of unattended recording for extended time periods. The complete system was calibrated to verify its response to known physical inputs. (C) 2003 ISA-The Instrumentation Automation Society.

Recombinant expression of Munc18c in a baculovirus system and interaction with syntaxin4

Two protein families that are critical for vesicle transport are the Syntaxin and Munc18/Sec1. families of proteins. These two molecules form a high affinity complex and play an essential role in vesicle docking and fusion. Munc18c was expressed as an N-terminally His-tagged fusion protein from recombinant baculovirus in Sf9 insect cells. His-tagged Munc18c was purified to homogeneity using both cobalt-chelating affinity chromatography and gel filtration chromatography. With this simple two-step protocol, 3.5 mg of purified Munc18c was obtained from a 1 L culture. Further, the N-terminal His-tag could be removed by thrombin cleavage while the tagged protein was bound to metal affinity resin. Recombinant Munc18c produced in this way is functional, in that it forms a stable complex with the SNARE interacting partner, syntaxin4. Thus we have developed a method for producing and purifying large amounts of functional Munc18c-both tagged and detagged-from a baculovirus expression system. We have also developed a method to purify the Munc18c:syntaxin4 complex. These methods will be employed for future functional and structural studies. Crown copyright (C) 2003 Published by Elsevier Inc. All rights reserved.

O papel da cidade de Viçosa-MG na rede urbana : a especialização funcional de uma cidade média mineira

Rede é o nome dado para se referenciar qualquer forma que seja composta por linhas interligadas por pontos, sendo assim essa denominação é utilizada para participar de nomes e conceitos em diversas área do conhecimento. Na geografia isso não ocorre de forma diferente. As redes geográficas são a denominação dada as ligações feitas no espaço articuladas por pontos, notadamente são usadas para se fazer referência a redes materiais, mas podem ser mais imateriais ou abstratas a depender do objeto de pesquisa e do adjetivo adotado. A noção de redes urbanas nasceu vinculada aos objetos materiais, entretanto com a evolução da técnica passou a abranger objetos cada vez mais virtuais. As redes urbanas são compostas pelo conjunto de cidades, cada qual com sua centralidade representadas por pontos ou nós na rede, e pelas ligações entre elas, rodovias, hidrovias, infovias etc. As cidades que compõem a rede, por mais semelhanças que possam ter entre si, tem diferentes tipos e graus de centralidade, de poder de atração de pessoas, de recursos; sendo uma região de influência singular, que muda de tempos em tempos, face a evolução do território onde se insere. Tanto as centralidades quanto as redes de urbanas estão em constante mudança, necessitando sempre de atualização tornando o estudo das redes e das centralidades uma questão sempre nova; em especial quando considerado um território tão vasto e complexo como o brasileiro. Neste trabalho relatamos os resultados do estudo das especificidades da centralidade da cidade de Viçosa, que está localizada no interior do estado de Minas Gerais, Brasil. Este estudo fez uso de dados numéricos, fotográficos e cartográficos coletados em diversos momentos da evolução do município e da região onde este se insere, que revelaram as mudanças de qualidade e de intensidade na centralidade dessa cidade, hoje tipificada como média ou intermediária, inserida na rede urbana mineira. No período compreendido entre os anos de 1850 e 1930, Viçosa passou de uma inexpressiva localidade rural, a importante centro de produção de café, galgando ganhos políticos nesse período. Seguiu-se um período de menor pujança, por cerca de setenta anos, para depois, na virada do século XX para XXI, ressurgi como uma localidade especializada em oferecer serviços, notadamente vinculados ao ensino superior e à produção de ciência e tecnologia. Essa nova centralidade, ao contrário do que muitas vezes ocorre, não foi fruto nem de um recurso natural inerente ao território e nem, tão pouco, pela atuação de grandes grupos capitalistas. Foi galgado principalmente pela atuação do Estado que construiu ali as bases de uma especialização funcional, através da implantação de uma universidade pública.

Cartografando movimentos curriculares produzidos nas redes de conversações nos encontrosformações do PROEJA/IFES/ES

Problematiza a constituição do currículo (e da “formação docente” no campo curricular), no cotidiano escolar, na dimensão das conversações. Objetiva acompanhar os movimentos curriculares concernentes ao Proeja entre formas e forças complexas no cotidiano do Ifes – campus Venda Nova do Imigrante (VNI). Compõe com as linhas de pensamentos principalmente de Alves (2008, 2010, 2012); Carvalho (2004, 2008a, 2008b, 2009, 2012); Deleuze (1988, 2002, 2010); Deleuze e Guattari (1995); Ferraço (2007, 2008a, 2008b); Garcia (2011); Guattari (1987, 2004, 2012); Kastrup (2009, 2013); Lopes e Macedo (2011); Lopes (2010, 2011); Oliveira (2005, 2009, 2012); Paiva (2004, 2009); Rolnik (1989); e Spinoza (2013), entremeando os conceitos de movimentos e afetos no campo do currículo em redes na relação híbrida com os encontros-formações docente do/no Proeja. Adota a (não) metodologia cartográfica ao acompanhar movimentos curriculares (des)(re)territorializantes nas redes de conversações, especialmente nos encontrosformações: “Rodas de conversas com professores e demais servidores do Proeja”. Utiliza como principais instrumentos metodológicos a observação participante, a gravação das vozes e o registro em diário de campo. Contribui para outros movimentos de pesquisa ao capturar produzir e analisar dados em que se percebe que: ainda que tenha ocorrido um planejamento coletivo, outras temáticas surgiram nos encontros formações (que não se pretendiam engessados e não objetivavam a paralisação dos fluxos que pedem passagem), e tais assuntos puderam ser usados como disparadores para criação de outros movimentos curriculares; as concepções dos professores sobre a “dificuldade/facilidade” em ministrar aulas para o Proeja e os lugares estabelecidos entre estudantes e docentes no processo ensino-aprendizagem não estão relacionados diretamente, em relação de causa e efeito, à disciplina/área de conhecimento específica que ministram, mas aos agenciamentos, aos ligamentos e às rupturas produzidas nas relações com essas redes de saberes fazeres poderes que envolvem múltiplos agentes: docentes, outros servidores, alunos, experiências e encontros múltiplos dentro fora no espaço tempo do Ifes; uma tríade-refrão coopera para a criação de uma fôrma triangular que enfatiza a noção de um padrão em um processo molar enraizado nas árvores do conhecimento: perfil, seleção e nivelamento, contudo, algumas linhas de fuga dissonantes são criadas por entre as fissuras dos pretensos tons harmônicos; as frases “os professores do IF não estão preparados para ministrar aulas para o Proeja” ou “não há formação/qualificação para os docentes se relacionarem com o Proeja” são utilizadas, em alguns discursos, como escudos-argumentos para a opção-política de não oferta de vagas para a modalidade EJA em composição com fios que afirmam tal especificidade da educação básica, dentro da rede federal, como um “favor social”; processos que envolvem a (des)organização da matriz curricular são considerados por alguns participantes como início, “produto” e objetivo das conversas curriculares e provocam tensões que (i)mobilizam, (não) movimentam entre os afetos dos corpos, podendo levar à (não) ação coletiva; a noção de “mercado de trabalho” ainda impera nos discursos, ciclicamente, enquanto início fim das problematizações do currículo do Ensino Médio e da EJA; a expressão “integração curricular” é constantemente usada nos discursos que circulam o campus, no entanto, os sentidos produzidos, as concepções e as teorias curriculares que embasam a noção de “integração” no currículo são bem diversos; não há totalidades nos discursos, não há homogeneização, não foi efetivada nenhuma coesão/única voz representante (e esse também não era o objetivo desta pesquisa); ainda que o tema da roda se propusesse às conversas curriculares do/no Proeja, nesses encontros, os participantes manifestaram a necessidade de intensificar os movimentos produzidos nas rodas visando à discussão dos currículos textos de todos os cursos e modalidades ofertados pelos campus VNI e na intensificação de espaços para trocas de experiências curriculares cotidianas; na potencialização das diferenças como possibilidades de inventividade nos encontros-formações docente e nas danças curriculares que envolvem diversas relações de aprendizagem no Ifes, algumas experimentações foram produzidas, entre afetos, criando composições(des)(re)territorializantes e ressonando com movimentos que não se restringiram às rodas de conversas, contudo, enredaram-se em fios de outros espaços tempos do campus em tentativas de propagações de currículos multidão.

Towards the design of efficient nonbeacon-enabled ZigBee networks

This paper presents experimental results of the communication performance evaluation of a prototype ZigBee-based patient monitoring system commissioned in an in-patient floor of a Portuguese hospital (HPG – Hospital Privado de Guimar~aes). Besides, it revisits relevant problems that affect the performance of nonbeacon-enabled ZigBee networks. Initially, the presence of hidden-nodes and the impact of sensor node mobility are discussed. It was observed, for instance, that the message delivery ratio in a star network consisting of six wireless electrocardiogram sensor devices may decrease from 100% when no hidden-nodes are present to 83.96% when half of the sensor devices are unable to detect the transmissions made by the other half. An additional aspect which affects the communication reliability is a deadlock condition that can occur if routers are unable to process incoming packets during the backoff part of the CSMA-CA mechanism. A simple approach to increase the message delivery ratio in this case is proposed and its effectiveness is verified. The discussion and results presented in this paper aim to contribute to the design of efficient networks,and are valid to other scenarios and environments rather than hospitals.

Real-time hand tracking for rehabilitation and character animation

Hand and finger tracking has a major importance in healthcare, for rehabilitation of hand function required due to a neurological disorder, and in virtual environment applications, like characters animation for on-line games or movies. Current solutions consist mostly of motion tracking gloves with embedded resistive bend sensors that most often suffer from signal drift, sensor saturation, sensor displacement and complex calibration procedures. More advanced solutions provide better tracking stability, but at the expense of a higher cost. The proposed solution aims to provide the required precision, stability and feasibility through the combination of eleven inertial measurements units (IMUs). Each unit captures the spatial orientation of the attached body. To fully capture the hand movement, each finger encompasses two units (at the proximal and distal phalanges), plus one unit at the back of the hand. The proposed glove was validated in two distinct steps: a) evaluation of the sensors’ accuracy and stability over time; b) evaluation of the bending trajectories during usual finger flexion tasks based on the intra-class correlation coefficient (ICC). Results revealed that the glove was sensitive mainly to magnetic field distortions and sensors tuning. The inclusion of a hard and soft iron correction algorithm and accelerometer and gyro drift and temperature compensation methods provided increased stability and precision. Finger trajectories evaluation yielded high ICC values with an overall reliability within application’s satisfying limits. The developed low cost system provides a straightforward calibration and usability, qualifying the device for hand and finger tracking in healthcare and animation industries.