Synthesis of summer flounder habitat parameters

The summer flounder, Paralichthys dentatus, is overexploited and is currently at very low levels of abundance. This is reflected in the compressed age structure of the population and the low catches in both commercial and recreational fisheries. Declining habitat quantity and quality may be contributing to these declines, however we lack a thorough understanding of the role of habitats in the population dynamics of this species. Stock structure is unresolved and current interpretations, depending on the technique and study area, suggest that there may be two or three spawning populations. If so, these stocks may have differing habitat requirements. In response to this lack of knowledge, this document summarizes and synthesizes the available information on summer flounder habitat in all life history stages (eggs, larvae, juveniles and adults) and identifies areas where further research is needed. Several levels of investigation were conducted in order to produce this document. First, an extensive search for summer flounder habitat information was made, which included both the primary and gray literature as well as unanalyzed data. Second, state and federal fisheries biologists and resource managers in all states within the primary range of summer flounder (Massachusetts to Florida) were interviewed along with a number of fish ecologists and summer flounder experts from the academic and private sectors. Finally, information from all sources was analyzed and synthesized to form a coherent overview. This document first presents an overview of the economic importance and current status of summer flounder (Chapter 1). It then summarizes our present state of knowledge of summer flounder distribution, life history patterns and stock identification (Chapter 2). This is followed by a synopsis of habitat requirements during each life history stage. For convenience, this is presented by general habitat as offshore eggs (Chapter 3), offshore larvae (Chapter 4), estuarine larvae (Chapter 5), estuarine juveniles (Chapter 6), offshore juveniles (Chapter 7) and estuarine and offshore adults (Chapter 8). In several instances, previously undigested data sets are analyzed to provide more detailed information, especially for estuarine juveniles. The information is then discussed in terms of its relevance to resource managers (Chapter 9).

Assessment and monitoring of marine debris in Gray's Reef National Marine Sanctuary

Gray’s Reef National Marine Sanctuary (GRNMS) is located 32.4 km offshore of Sapelo Island, Georgia. The ecological importance of this area is related to the transition between tropical and temperate waters, and the existence of a topographically complex system of ledges. Due to its central location, GRNMS can be used as a focal site to study the accumulation and impacts of marine debris on the Atlantic continental shelf offshore of the Southeast United States. Previously, researchers characterized marine debris in GRNMS and reported that incidence of the debris at the limited densely colonized ledge sites was significantly greater than at sand or sparsely colonized live bottom, and is further influenced by the level of boating activity and physiographic characteristics (e.g., ledge height). Information gleaned from the initial marine debris characterization was used to devise a strategy for prioritizing cleanup and monitoring efforts. However, a significant gap in knowledge was the rate of debris accumulation. The primary objective of this study was to select, mark, and perform initial marine debris surveys at permanent monitoring sites within GRNMS to quantify long-term trends in types, abundance, impacts, and accumulation rates of debris. Ledge sites were selected to compare types, abundance, and accumulation rates of marine debris between a) areas of high and low use and b) short and tall ledges. Nine permanent monitoring sites were marked and initially surveyed in 2007/2008. Surveys were conducted within a 50 x 4 m transect for a total survey area of 200 square meters. All debris was removed and detailed information was taken on the types of debris, quantity, and associations with benthic fauna. Information on associations with benthic fauna included degree of entanglement, type of organism with which it is entangled or resting on, degree of fouling, and visible impacts such as tissue abrasions. Sites were re-surveyed approximately one year later to quantify new accumulation. During the initial survey, a total of ten debris items, totaling 16.3 kg in weight, were removed from two monitoring stations, both “tall” sites within the area of high boat use. Year-one accumulation totaled five items and approximately 7 kg in weight. Similar to the initial survey, all debris was found at sites in the area of high boat use. However, in contrast to the initial survey, two of these items were found on medium-height ledges. Removed items included fishing line, leaders, rope, plastic, and fabric. Although items were often encrusted in benthic biota or entangled on the ledge, impacts such as abrasions or other injuries were not observed. During the 2009 monitoring efforts, volunteer divers were trained to conduct the survey. Monitoring protocols were documented for GRNMS staff and included as an appendix of this report to enable long-term monitoring of sites. Additionally, national reconnaissance data (e.g. satellite, radar, aerial surveys) and other information on known fishing locations were examined for patterns of resource use and correlations with debris occurrence patterns. A previous model predicting the density of marine debris based on ledge features and boat use was refined and the results were used to generate a map of predicted debris density for all ledges.

Isolation, purification, and full NMR assignments of cyclopamine from Veratrum californicum

The Hedgehog signaling pathway is essential for embryogenesis and for tissue homeostasis in the adult. However, it may induce malignancies in a number of tissues when constitutively activated, and it may also have a role in other forms of normal and maladaptive growth. Cyclopamine, a naturally occurring steroidal alkaloid, specifically inhibits the Hedgehog pathway by binding directly to Smoothened, an important Hedgehog response element. To use cyclopamine as a tool to explore and/or inhibit the Hedgehog pathway in vivo, a substantial quantity is required, and as a practical matter cyclopamine has been effectively unavailable for usage in animals larger than mice.

Trade secrets: a ten year overview of the illegal import of sea turtle products into the United States

For more than 25 years all sea turtle products have been prohibited from international commerce by the 170-member nations of the Convention on International Trade in Endangered Species (CITES). Sea turtles continue to be threatened by direct take (including poaching) and illegal trade despite multi-national protection efforts. Although take may contribute significantly to sea turtle decline, illegal take is difficult to measure since there are few quantified records associated with legal fisheries and fewer still for illegal take (poaching). We can, however, quantify one portion of the illegal sea turtle trade by determining how many illegal products were seized at United States ports of entry over a recent 10-year period. The United States Fish and Wildlife Service (USFWS) oversees the import and export of wildlife and wildlife products, ensuring that wildlife trade complies with United States laws and international treaties. Additionally, the USFWS has legal authority to target suspected illegal wildlife activity through undercover and field investigations. In an effort to assess the scale of illegal sea turtle take and trade, we have conducted a 10-year (1994 – 2003) review of the law enforcement database maintained by the USFWS. This database tracks the number and type of wildlife cases, the quantity of seized products, and the penalties assessed against violators. These data are minimum estimates of the sea turtle products passing through the United States borders, as smuggled wildlife is oftentimes not detected.

Swimming crab Callinectes amnicola (Decapoda-Portunidae) capture analysis of a lagoon with high continental influence (Aby Lagoon, Cote d'Ivoire, West Africa)

The study describes the main causes of captures and productions decreasing of swimming crab Callinectes amnicola (Decapoda Portunidae) in Aby lagoon complex. For that, docks of two Sub Prefectures of Adiaké and Assini-Mafia respectively including the villages of Adiaké, Anga, Assomlan, Epleman, Aby and Man-Man, M'Bratty, Assini-Ngouankro and Assini-Mafia were studied from 2006 to 2009 and completed with previous results obtained from 1988 to 2005. Field investigators were identified by site/village and they recorded daily activities of fishermen (number of effective fishermen, number of gears and area of fishing, duration of fishing, types and quantity of bait) and landing of swimming crabs. During recent period of the study, total production decreased from 3742 tons in 2006 to 1500 tons in 2009. Matrix correlations and correlation analysis indicated that this downward trend was due to the increase of the number of fishermen, number of fishing gear, the decrease in female crabs capture and degradation of the environment related to gradual closure of the Assini-Mafia channel. Despite this decline, total production in Aby lagoon remained high compared to the productions of some lagoons of the country and the region. Given the importance of fishing swimming crabs in Aby lagoon, since it concerns many young people and it is a source of income, stringent measures for sustainable and responsible management must be taken and implemented as part of a co-management plan involving all stakeholders to sustainably manage the resource

The effect of intensive line fishing on the virgin biomass of a tropical deepwater snapper, the crimson jobfish (Pristipomoides filamentosus)

An intensive commercial hook-and-line fishing operation targeted the demersal fisheries resources at Saya de Malha Bank in the Southwest Indian Ocean. Fishing was conducted with 12 dories that were equipped with echo sounders and electric fishing reels and supported by a refrigerated mothership. Over a 13-day period in the 55–130 m depth range, a total of 74.3 metric tons (t) of fish were caught, of which the crimson jobfish (Pristipomoides filamentosus) represented 80%. Catch rates decreased with time and could not be attributed to changes in location, climatic conditions, fishing depth, fishing method, or bait type. The initial virgin biomass of P. filamentosus available to a line fishery at the North Western promontory of Saya de Malha Bank was estimated at 72.6 t through application of the Leslie model to daily catch and effort data. Biomass densities of 2364 kg/km2 and 1206 kg/km were obtained by applying the initial biomass estimates to the surface area and to the length of the dropoff that was fished. The potential sustainable yield prior to exploitation was estimated at 567 kg/km2 per year. The quantity of P. filamentosus caught by the mother-ship-dory fishing operation represented 82% of the initial biomass available to a hook-and-line fishery, equivalent to more that three times the estimated maximum sustainable yield. The results of the study are important to fisheries managers because they demonstrate that intensive line fishing operations have the potential to rapidly deplete demersal fisheries resources.

Assessment of sampling methods to estimate horseshoe crab (Limulus polyphemus L.) egg density in Delaware Bay

Each spring horseshoe crabs (Limulus polyphemus L.) emerge from Delaware Bay to spawn and deposit their eggs on the foreshore of sandy beaches (Shuster and Botton, 1985; Smith et al., 2002a). From mid-May to early June, migratory shorebirds stopover in Delaware Bay and forage heavily on horseshoe crab eggs that have been transported up onto the beach (Botton et al., 1994; Burger et al., 1997; Tsipoura and Burger, 1999). Thus, estimating the quantity of horseshoe crab eggs in Delaware Bay beaches can be useful for monitoring spawning activity and assessing the amount of forage available to migratory shorebirds.

Fichas de material

The main purpose in the preparation of the material cards is to help the supplies concerning UDPPE's and Equipesca's staff in the appraisals of the quantity and quality of the strategic fishing materials ordered to them and in the planning of the distribution of such materials through out their national brokerage network. In the other hand the cards will be also helpful in the knowledge of each of those items utilization

Early and better maturity in carp brood stock with control of environment and feeding

Available of carp breeders in their prim state of maturity is a major constraint in hypophysation. Experiments conducted in a fish farm at Naihati, West Bengal, for two consecutive years, 1983-84 and 1984-85, clearly prove that by manipulation of environmental parameters such as metabolites, dissolved oxygen, running water conditions, as also of stock densities and quality and quantity of feed. Catla catla, Hypophythalmichthys molitrix, Labeo rohita, Cirrhina mrigala and Ctenopharyngodon idella can be made to attain better maturity and spawning stage much earlier than normal i.e. even in summer months and the entire stock spawned during the period from March to September. Percentage of successful breeding, quantities of eggs released and fertilised in relation to the body weight of all the species, were also found to be more in comparison to the brood stock raised through the conventional methods.

Fatty acid composition of three species of Hypnea (Gigartinales, Rhodophyta) from Karachi coast

Hypnea musciformis (Wulf.) Lamour., H. pannosa J. Ag. and H. valentiae (Turn.) Mont., collected from the northern Arabian Sea coast of Pakistan, have been investigated for their fatty acid compositions through GC-MS. Palmitic acid was present in largest quantity (55-57%) and oleic was the major (7.6-8.4%) unsaturated fatty acid. Pentacosanoic and hexacosenoic acids are being reported for the first time from any species of Hypnea. The three species differed remarkably due to their habitat ecology.

新疆天山中段北部空中花粉数量的时空变化及其气候与植被指示意义

空中花粉是植被类型、气候状况与大气环境质量的指示物之一。空中花粉雨的取样实验对化石花粉谱的解释和古植被的恢复具有指导意义，因此空中花粉分析成为第四纪孢粉学和古生态学研究的有效辅助手段。本研究在新疆天山中段北坡进行了短期的空中花粉监测（2001年7月~2006年7月），目的是获得局域性和区域性植被所散发的花粉类型及其数量信息，并探讨花粉数量的植被与气候指示意义、花粉传播以及受环境条件影响的程度，同时分析和检测花粉浓度受气候条件的影响情况。空中花粉的收集使用Cour-type捕捉器，分别在3个不同海拔梯度进行5年连续的空中花粉收集（夏秋季节每周一个样品，冬春季节每两周一个样品）。取样地点分别是新疆天山中段北部的天池气象观测站（43°53'58.38"N, 88°07'15.75"E , 海拔1942.5m）、中科院阜康荒漠生态系统定位站（44°17'27.41"N, 87°55'52.65"E, 海拔477m）和准噶尔盆地古尔班通古特沙漠南缘的北沙窝试验站(44°22'40.74"N, 87°55'9.74"E, 海拔443m），取样点的植被带跨度天山北坡的森林草原到低海拔的典型荒漠。 光学显微镜鉴定的空中花粉主要有43种类型（24科30属），而蕨类、苔藓与真菌孢子数量较少。孢粉类型多样性指数为2.45（Shannon Index）。显然，从样品中所鉴定的空中花粉种类与所观察的植物种类有很大的差距。花粉类型与数量在三个不同海拔梯度的取样点上也有明显差异。天池取样点的花粉类型较丰富，与天山北坡垂直带植被分布以及丰富的植被成分相对应，花粉的优势种类为雪岭云杉(Picea schrenkiana)、蒿属(Artemisia)、藜科(Chenopodiaceae)、柽柳科(Tamaricaceae)和麻黄属(Ephedra)，高代表性的外源荒漠花粉类型“削弱了”本地花粉类型的代表性;阜康与北沙窝取样点的花粉类型主要来自荒漠成分的藜科、蒿属、麻黄属、蒺藜科(Zygophyllaceae, 白刺属Nitraria为主）、柽柳科（柽柳属为主）、蓼科(Polygonaceae, 沙拐枣属Calligonum为主）等耐旱植物。花粉数量与植被数量并非简单的线性关系。空中和表土花粉的数量分析表明，藜科、蒿属、麻黄属花粉具有超代表性;雪岭云杉花粉的代表性适中;禾本科(Gramineae)、榆属(Ulmus)、白刺属、柽柳科、沙拐枣属花粉代表性较差。 5年平均花粉浓度大小依次是阜康（81.668 grains/100m3）>天池（51.726 grains/100m3）>北沙窝（45.7685 grains/100m3）。蒿属花粉的峰值出现在秋季，并且出现双峰现象（可能与不同蒿类花期分布不均有关），而其它木本和草本类植物花粉浓度的峰值为单峰，具有明显的季节性，春夏之交开花的桦木属、榆属等类型较为明显。藜科花粉的峰值出现在夏季，麻黄和柽柳的峰值出现在盛夏，桦木属、柳属Salix、雪岭云杉等花粉浓度峰值出现在初夏，与其花期物候相对应。木本植物花粉以雪岭云杉为主，其次为桦木属(Betula)、榆属、柳属、胡颓子科(Elaeagnaceae)花粉，柳属花粉百分比在三个取样点分配比较均匀，桦木属花粉在空间分布上差异明显，与植物分布数量相关。胡颓子科的花粉出现时间短，数量也较少。榆属花粉出现的季节性明显，代表性也较差。因此解释地层中出现类似的低代表性和高代表性的花粉类型时，需要注意其百分比数量的适当校正。木本植物花粉百分比随海拔高度变化成正比关系，对植被的指示性较好。雪岭云杉的年平均花粉浓度在天池取样点明显高于其它两个取样点，5年的平均花粉浓度和百分比与海拔高度呈正比。天池取样点的百分比最高为28.85%，平均为21.15%，而北沙窝与阜康两地5年平均百分比含量分别为0.69%和1.57%，这种时空变化规律与植被数量的关系密切。藜科花粉百分比在阜康和北沙窝取样点占绝对优势，5年的平均花粉浓度与海拔高度呈反比。蒿属花粉年平均浓度与海拔高度关系微弱（R2=0.04，p =0.46），而花粉百分比与海拔高度有显著的线性正比关系（R2=0.72，p<0.0001）。但在低海拔的两个取样点之间差异不明显。 年平均花粉百分比和花粉浓度随海拔梯度而变化，主要花粉类型的变化规律存在差异。暗针叶林雪岭云杉花粉的年平均百分比在低海拔的阜康和北沙窝地区低于3%，在盛花期的6月初，低海拔的取样点也未见超过5%，雪岭云杉花粉的传播在研究区范围内数量分布变化较大，再次表明该类型的花粉在原地沉积效率很高。空中花粉数量能够较好地指示主要的植被带，盛花期内50%以上的雪岭云杉花粉含量则指示了雪岭云杉森林植被带，而高含量的蒿属植物花粉指示了天山山前冲积平原上的蒿类荒漠，相反，高含量的藜科花粉代表了低海拔地区的荒漠。雪岭云杉花粉百分比与浓度均与海拔高度呈显著的线性正比关系，表明雪岭云杉花粉传播的局限性。主要的非木本植物藜科花粉的浓度与海拔高度成反比，蒿属则相反，表明藜科与蒿属花粉在研究区具有很好的植被与气候指示意义。 花粉绝对数量、百分比、浓度具有明显的年际变化，其原因与气候状况的变化有关，年平均花粉浓度、主要类型的花粉浓度与气候参数（降水量、平均温度、最高和最低温度、相对湿度等）的相关分析表明，降水量和湿度与花粉浓度呈负相关程度较高，与其它气候参数则呈显著的正相关。干旱指数、花粉比值、花粉百分比（AP，NAP）与七月份平均气温，年平均降水量的相关系数（Pearson correlation），Ar/Ch与七月平均温度在0.01水平上呈显著的正相关（R2=0.894）, 与年平均降水量在0.01水平上呈显著的负相关（R2=0.874）。AP花粉百分比与七月份平均温度呈显著的负相关（R2=0.71, p<0.0001），与年降水量呈正相关（R2=0.43, p=0.01），而NAP花粉正相反。利用短期监测的空中花粉雨数据计算得到的花粉比值以及干旱指数在研究区具有明确的指示意义，尤其是干旱指数、Ar/Ch、Ar/Ep，这些都可为表土花粉、植被与气候关系模型的建立提供重要的参考信息。 气候参数在很大程度上影响大气花粉的浓度，而风速和风向对空中花粉的传播、散布影响较大，花粉的来源与传播受风向和风速的控制。不同取样点的空中花粉数量差异受地形条件影响很明显，这种差异也可利用地形空气动力学特征的差异来解释，天池监测站因“逆坡”（upslope）的气流促进了低海拔的花粉流向高海拔传播。 研究区的空中花粉数量信息是研究表土花粉、植被和气候关系以及第四纪古生态学的重要基础。本研究提高了对研究区空中孢粉的类型及其传播规律的认识和理解，增加了解空中花粉受环境影响的主要因素及其影响程度，对地层孢粉类型鉴定和花粉数据的解释提出指导性建议，对本地区的古植被与古环境研究增加现代孢粉学的参考依据和信息，并可为建立区域性的现代孢粉－植被－气候关系模型提供可靠依据。 同时，本报告也讨论了存在问题和不足，并提出了今后工作的可能完善方案。

The protein, peptide and free amino-acid contents of some species of Gracilaria from south-east coast of India

Four species of Gracilaria are investigated for their free amino-acid contents, as well as amino-acid constituents in the proteins and the peptides, using quantitative paper chromatographic technique. Amino-acid constituents of different species of Gracilaria differ only in amount, while free amino-acids and the amino-acids in the peptides vary both in quality and quantity. A number of amino-acids recorded as protein constituents have even escaped detection in the peptides, while in the free state they occur either in all the species or in some only except homocystine. Moreover, some amino-acids occur exclusively in the free state.

Sampling of frozen prawns for bacteriological estimation

Experiments were conducted to study the significance of difference between samples taken from the surface and interior of a frozen shrimps block, as well as to determine the size of sample necessary to represent the whole block, with respect to bacterial count determination. The results showed that the surface samples and interior samples did not differ significantly at 5% level of significance and that the minimum quantity representative of the block was 21-26 gms in the case of a block weighing about 1300 gms. The procedure adopted for taking the bacterial count was the normal standard plate count method.

Some aspects of freezing and frozen storage of pomfrets

It has been observed that a better frozen product can be obtained by freezing good quality pomfrets transported in insulated containers with sufficient quantity of ice. To enhance the keeping quality and to prevent dehydration and discoloration, a dip in B H A (0.005%) for 15 minutes and subsequent storage in polythene lined gunny bag at -15°c to -I8°c can be recommended. The products treated in the above manner can be stored well over six months. Periodical glazing at an interval of 3 weeks will also prevent the dehydration to a greater extent.

Commercial utilization of dolphins (porpoises) in Ceylon

Two species of mammal dolphin are found in waters adjacent to Ceylon, namely the common dolphin (Delphinus delphis) and the bottled-nosed dolphin (Tursiops truricatus). Both these species are predators and cause damage to finishing nets by attacking fish trapped in them. This menace to nets is particularly pronounced when fish populations in a particular area become somewhat depleted. Dolphin can be successfully captured from a motor boat by use of a simple hand harpoon with a detachable dart and bladder buoy. Fresh dolphin meat when placed on the market sold readily despite some local prejudice against the naturally dark colored meat. The flesh of the dolphin is nutritious and can be used successfully in both western and eastern types of cookery.