Profiling the Proteome of the Venom from the Social Wasp Polybia paulista: A Clue to Understand the Envenoming Mechanism

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

Immunodominant Antigens of Leishmania chagasi Associated with Protection against Human Visceral Leishmaniasis

Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)

Influence of water level variation on biomass and chemical composition of the aquatic macrophyte Eichhornia azurea (Kunth) in an oxbow lake of the Rio Mogi-Guacu (São Paulo, Brazil)

The influence of water level variation (flood pulse) on the biomass and chemical composition of the aquatic macrophyte Eichhornia azurea, was investigated in a tropical oxbow lake of the Rio Mogi-Guacu, State of São Paulo, Brazil. The flood pulse causes an increase in total nitrogen content from 0.67 to 1.35 mg/L and total phosphorus content from 10.5 to 101.0 mu g/L of the water. This fertilization, associated with other factors, determines a typical seasonal variation in the biomass and chemical composition of the macrophyte.

PrimerSNP: a web tool for whole-genome selection of allele-specific and common primers of phylogenetically-related bacterial genomic sequences

Background: The increasing number of genomic sequences of bacteria makes it possible to select unique SNPs of a particular strain/species at the whole genome level and thus design specific primers based on the SNPs. The high similarity of genomic sequences among phylogenetically-related bacteria requires the identification of the few loci in the genome that can serve as unique markers for strain differentiation. PrimerSNP attempts to identify reliable strain-specific markers, on which specific primers are designed for pathogen detection purpose.Results: PrimerSNP is an online tool to design primers based on strain specific SNPs for multiple strains/species of microorganisms at the whole genome level. The allele-specific primers could distinguish query sequences of one strain from other homologous sequences by standard PCR reaction. Additionally, PrimerSNP provides a feature for designing common primers that can amplify all the homologous sequences of multiple strains/species of microorganisms. PrimerSNP is freely available at http://cropdisease.ars.usda.gov/similar to primer.Conclusion: PrimerSNP is a high-throughput specific primer generation tool for the differentiation of phylogenetically-related strains/species. Experimental validation showed that this software had a successful prediction rate of 80.4 - 100% for strain specific primer design.

Optimal clone identifier for genomic shotgun libraries: OC Identifier tool

In DNA microarray experiments, the gene fragments that are spotted on the slides are usually obtained by the synthesis of specific oligonucleotides that are able to amplify genes through PCR. Shotgun library sequences are an alternative to synthesis of primers for the study of each gene in the genome. The possibility of putting thousands of gene sequences into a single slide allows the use of shotgun clones in order to proceed with microarray analysis without a completely sequenced genome. We developed an OC Identifier tool (optimal clone identifier for genomic shotgun libraries) for the identification of unique genes in shotgun libraries based on a partially sequenced genome; this allows simultaneous use of clones in projects such as transcriptome and phylogeny studies, using comparative genomic hybridization and genome assembly. The OC Identifier tool allows comparative genome analysis, biological databases, query language in relational databases, and provides bioinformatics tools to identify clones that contain unique genes as alternatives to primer synthesis. The OC Identifier allows analysis of clones during the sequencing phase, making it possible to select genes of interest for construction of a DNA microarray. ©FUNPEC-RP.

Fusion of fingerprint recognition methods for robust human identification

Biometrics is one of the biggest tendencies in human identification. The fingerprint is the most widely used biometric. However considering the automatic fingerprint recognition a completely solved problem is a common mistake. The most popular and extensively used methods, the minutiae-based, do not perform well on poor-quality images and when just a small area of overlap between the template and the query images exists. The use of multibiometrics is considered one of the keys to overcome the weakness and improve the accuracy of biometrics systems. This paper presents the fusion of a minutiae-based and a ridge-based fingerprint recognition method at rank, decision and score level. The fusion techniques implemented leaded to a reduction of the Equal Error Rate by 31.78% (from 4.09% to 2.79%) and a decreasing of 6 positions in the rank to reach a Correct Retrieval (from rank 8 to 2) when assessed in the FVC2002-DB1A database. © 2008 IEEE.

Avaliação comparada do uso de linguagens de indexação em catálogos de bibliotecas universitárias para recuperação por assunto

A comparative evaluation was made of the use of natural language versus two specialized indexing languages, aiming to demonstrate the influence of the availability of indexing languages on the functioning of information retrieval systems. The study was conducted within the ambit of the construction of search strategies by subject in online university library catalogs. The precision ratio was calculated to determine the accuracy of each indexing language in subjectbased information retrieval. From the comparative evaluation of the use of indexing languages, it was concluded that the term specificity required by the user during retrieval was more satisfactory when the query was made through controlled languages, whose availability and simplicity is also an indispensable requisite.

Application of ontologies in peer-to-peer database with routing queries based on ant colony algorithm

A significant set of information stored in different databases around the world, can be shared through peer-topeer databases. With that, is obtained a large base of knowledge, without the need for large investments because they are used existing databases, as well as the infrastructure in place. However, the structural characteristics of peer-topeer, makes complex the process of finding such information. On the other side, these databases are often heterogeneous in their schemas, but semantically similar in their content. A good peer-to-peer databases systems should allow the user access information from databases scattered across the network and receive only the information really relate to your topic of interest. This paper proposes to use ontologies in peer-to-peer database queries to represent the semantics inherent to the data. The main contribution of this work is enable integration between heterogeneous databases, improve the performance of such queries and use the algorithm of optimization Ant Colony to solve the problem of locating information on peer-to-peer networks, which presents an improve of 18% in results. © 2011 IEEE.

Jornalismo pós-televisivo: o caso do jornal Bom dia Bauru

Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)

Gênero, pentecostalismo e formação de professores na construção da cidadania: as professoras da congregação Cristã no Brasil

Pós-graduação em Educação - FCT

Uma viagem pela intertextualidade em Reinações de Narizinho

Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)

Raízes da Vergonha: um estudo psicossociológico sobre a vivência de trecheiros

Pós-graduação em Psicologia - FCLAS

Roteamento de consultas em banco de dados peer-to-peer utilizando colônias de formigas e ontologias

Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)

Fusão de métodos baseados em minúcias e em cristas para reconhecimento de impressões digitais

Pós-graduação em Ciência da Computação - IBILCE

LABSQL: laboratório de ensino de SQL

Este trabalho apresenta uma nova abordagem para avaliação automática de consultas SQL. Essa abordagem propõe uma solução para o desafio de estimular o aprendiz a aperfeiçoar a sua solução: buscando, além de uma resposta que retorna o resultado correto, uma consulta com complexidade próxima da solução ótima. Essa proposta pode ser utilizada em ambientes de educação a distancia ou na educação presencial em atividades de laboratório, incluindo as avaliações. A solução proposta tem como vantagens: (1) o aprendiz recebe um feedback instantâneo durante a atividade prática de programação, o qual permite ao aprendiz refatorar a sua solução em direção a uma solução ótima; (2) completa integração entre o ensino de conceitos de programação com exemplo de fragmentos de programas executáveis on-line; (3) monitoramento das atividades do aprendiz (quantos exemplos foram executados; em cada exercício quantas tentativas de execução foram feitas, etc). Este trabalho é um primeiro passo na direção de construção de um ambiente totalmente assistido (por exemplo com avaliação automática) para ensino da linguagem de programação SQL, onde o professor é liberado do árduo trabalho de correção de comandos SQL podendo realizar tarefas pedagógicas mais relevantes. O método, fundamentado em estatística e métricas da Engenharia de Software, pode ser adaptado para outras linguagens tais como Java e Pascal. Além disso, o LabSQL serve com um laboratório para experimentação de duas novas técnicas, uma de avaliação e outra de acompanhamento, que estão sendo pesquisadas em trabalhos em paralelos: (a) avaliação automática de questões conceituais discursivas, além de permitir as tradicionais perguntas objetivas, (b) método de acompanhamento através de montagem de uma rubrica de avaliação.