982 resultados para MORPHOLOGICAL CHARACTERS


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Phylogenetic analyses of the Hypnales usually show the same picture of poorly resolved trees with a large number of polyphyletic taxa and low support for the few reconstructed clades. One odd clade, however, consisting of three genera that are currently treated either within the Leskeaceae (Miyabea) or Neckeraceae (Homaliadelphus and Bissetia), was retrieved in a previously published phylogeny based on chloroplast rbcL. In order to elucidate the reliability of the observed Homaliadelphus - Miyabea - Bissetia - clade (HMB-clade) and to reveal its phylogenetic relationships a molecular study based on a representative set of hypnalean taxa was performed. Sequence data from all three genomes, namely the ITS1 and 2 (nuclear), the trnS-rps4-trnT-trnL-trnF cluster (plastid), the nad5 intron (mitochondrial), were analyzed. Although the phylogenetic reconstruction of the combined data set was not fully resolved regarding the backbone it clearly indicated the polyphyletic nature of various hypnalean families, such as the Leskeaceae, Hypnaceae, Hylocomiaceae, Neckeraceae, Leptodontaceae and Anomodontaceae with respect to the included taxa. In addition the results favor the inclusion of the Leptodontaceae and Thamnobryaceae in the Neckeraceae. The maximally supported HMB-clade consisting of the three genera Homaliadelphus (2-3 species), Miyabea (3 species) and Bissetia (1 species) is resolved sister to a so far unnamed clade comprising Taxiphyllum aomoriense, Glossadelphus ogatae and Leptopterigynandrum. The well-resolved and supported HMB-clade, here formally described as the Miyabeaceae, fam. nov. is additionally supported by morphological characters such as strongly incrassate, porose leaf cells, a relatively weak and diffuse costa and the presence of dwarf males. The latter are absent in the Neckeraceae and the Leskeaceae. It is essentially an East Asian family, with one species occurring in North America.

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The Caucasus region is a hotspot of biodiversity and is one of the few areas in the Northern Hemisphere which harbor Pleistocene glacial refugia. The region encompasses Armenia, Azerbaijan, Georgia, the southernmost European Russia, NE Turkey, and northern Iran. The study on fungal composition of the Caucasus region and its connection and possible contribution to the present mycota of Europe has largely escaped empirical scrutiny. Using taxonomic surveys, phylogenetic reconstruction methods, haplotype analysis, and similarity tests, this study has aimed to, 1) summarize the knowledge on the occurrence of corticioids and polypores in the Caucasus region, 2) resolve the phylogenetic relationships of selected, resupinate wood-inhabiting basidiomycetes for which the Caucasus region is currently the mere, or one of the noteworthy areas of distribution, and, 3) assess the similarity of Caucasian corticioid fungi to those of Europe and important areas in the Northern Hemisphere, and to examine the significance of the Caucasus region as a glacial refugium for these fungi. This study provides the first catalogue of corticioids and polypores (635 species) occurring in the Caucasus region. The phylogeny and systematics of the Caucasian resupinate taxa in focus has been resolved and the usefulness of some morphological characters has been re-evaluated. In this context, four new genera and two new species were described and five new combinations were proposed, two of which were supplemented with modern descriptions. The species composition of corticioids in the Caucasus region is found to be distinctly more similar to Europe and North America than to East Asia and India. The highest molecular diversity and within population pairwise distance for Peniophorella praetermissa has been detected in the Caucasus and East Asia, with the isolates of the latter area being highly divergent from the European ones. This, and the assignment of root haplotype to the Caucasian isolates in a haplotype network for Phlebia tuberucalta and P. livida, call attention to the role of the Caucasus region in shaping the current mycota of Europe.

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Species identification forms the basis for understanding the diversity of the living world, but it is also a prerequisite for understanding many evolutionary patterns and processes. The most promising approach for correctly delimiting and identifying species is to integrate many types of information in the same study. Our aim was to test how cuticular hydro- carbons, traditional morphometrics, genetic polymorphisms in nuclear markers (allozymes and DNA microsatellites) and DNA barcoding (partial mitochondrial COI gene) perform in delimiting species. As an example, we used two closely related Formica ants, F. fusca and F. lemani, sampled from a sympatric population in the northern part of their distribu- tion. Morphological characters vary and overlap in different parts of their distribution areas, but cuticular hydrocarbons include a strong taxonomic signal and our aim is to test the degree to which morphological and genetic data correspond to the chemical data. In the morphological analysis, species were best separated by the combined number of hairs on pro- notum and mesonotum, but individual workers overlapped in hair numbers, as previously noted by several authors. Nests of the two species were separated but not clustered according to species in a Principal Component Analysis made on nuclear genetic data. However, model-based Bayesian clustering resulted in perfect separation of the species and gave no indication of hybridization. Furthermore, F. lemani and F. fusca did not share any mitochondrial haplotypes, and the species were perfectly separated in a phylogenetic tree. We conclude that F. fusca and F. lemani are valid species that can be separated in our study area relatively well with all methods employed. However, the unusually small genetic differen- tiation in nuclear markers (FST = 0.12) shows that they are closely related, and occasional hybridization between F. fusca and F. lemani cannot be ruled out.

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This dissertation is focused on the taxonomy, phylogeny, and ecology of the vagrant, erratic and allied terricolous and saxicolous species of the genera Aspicilia A. Massal. and Circinaria Link (Megasporaceae), particularly those traditionally referred to as manna lichens . The group has previously been defined on the basis of few morphological characters. The phylogeny of the family Megasporaceae is inferred from the combined dataset of nuLSU and mtSSU sequences. Five genera Aspicilia, Circinaria, Lobothallia, Megaspora, and Sagedia are recognized. Lobothallia is sister of the four other genera, while Aspicilia and Sagedia form the next clade. All these genera have small asci with eight spores. Circinaria is a sister genus of Megaspora, and these two have in common asci with (1 4) 6 8 large spores. Circinaria forms a monophyletic group and sphaerothallioid species form a monophyletic group within Circinaria. The presence of certain morphological characters such as pseudocyphellae, thickness of cortex and medulla layers, as well as ecological differences in sphaerothallioid species distinguish it from some other crustose species, especially those containing aspicilin and characterised by thin cortex and medulla layers, conidium length c. 6 12 µm and absence of pseudocyphellae. If sphaerothallioid species are accepted as a distinct genus, the rest of the Circinaria species would remain as a paraphyletic assemblage. Currently, the genus Circinaria includes all the sphaerothallioid species and its generic position is confirmed and accepted. Thus, it is proposed as a correct generic name also for the manna lichens described originally in other genera. Phylogeny at the species level was studied using nrITS sequence data. Traditionally, morphological characters have been used for the recognition of species. They were re-evaluated in the light of molecular data. Since characters such as vagrant, erratic and crustose growth forms proved to be misleading for the recognition of some species, a combination of several characters (including molecular data) is recommended. Vagrant growth form seems to have evolved several times among the distantly related lineages and even within a single population. The reasons behind the high plasticity in the external morphology of the sphaerothallioid Circinaria remain, however, unknown. Six new species are recognized: Aspicilia tibetica, Circinaria arida, C. digitata nom provis., C. gyrosa nom. provis., C. rogeri nom. provis., and C. rostamii nom. provis. Based on an analysis of nrITS dataset, three new erratic, vagrant and crustose species were also recognized, but these require additional study. The results also reveal that C. elmorei and C. hispida are not monophyletic as currently understood. In addition, 13 new combinations in the genus Circinaria are proposed.

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The Hanuman langur is one of the most widely distributed and morphologically variable non-human primates in South Asia. Even though it has been extensively studied, the taxonomic status of this species remains unresolved due to incongruence between various classification schemes. This incongruence, we believe, is largely due to the use of plastic morphological characters such as coat color in classification. Additionally these classification schemes were largely based on reanalysis of the same set of museum specimens. To bring greater resolution in Hanuman langur taxonomy we undertook a field survey to study variation in external morphological characters among Hanuman langurs. The primary objective of this study is to ascertain the number of morphologically recognizable units (morphotypes) of Hanuman langur in peninsular India and to compare our field observations with published classification schemes. We typed five color-independent characters for multiple adults from various populations in South India. We used the presence-absence matrix of these characters to derive the pair-wise distance between individuals and used this to construct a neighbor-joining (NJ) tree. The resulting NJ tree retrieved six distinct clusters, which we assigned to different morphotypes. These morphotypes can be identified in the field by using a combination of five diagnostic characters. We determined the approximate distributions of these morphotypes by plotting the sampling locations of each morphotype on a map using GIS software. Our field observations are largely concordant with some of the earliest classification schemes, but are incongruent with recent classification schemes. Based on these results we recommend Hill (Ceylon Journal of Science, Colombo 21:277-305, 1939) and Pocock (Primates and carnivora (in part) (pp. 97-163). London: Taylor and Francis, 1939) classification schemes for future studies on Hanuman langurs.

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Sepsophis punctatus Beddome 1870, the only species of a monotypic genus, was described based on a single specimen from the Eastern Ghats of India. We rediscovered the species based on specimens from Odisha and Andhra Pradesh state, India, after a gap of 137 years, including four specimens from close to the type locality. The holotype was studied in detail, and we present additional morphological characters of the species with details on natural history, habitat and diet. The morphological characters of the holotype along with two additional specimens collected by Beddome are compared with the specimens collected by us. We also briefly discuss the distribution of other members of the subfamily Scincinae and their evolutionary affinities.

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Reproductive modes are diverse and unique in anurans. Selective pressures of evolution, ecology and environment are attributed to such diverse reproductive modes. Globally forty different reproductive modes in anurans have been described to date. The genus Nyctibatrachus has been recently revised and belongs to an ancient lineage of frog families in the Western Ghats of India. Species of this genus are known to exhibit mountain associated clade endemism and novel breeding behaviours. The purpose of this study is to present unique reproductive behaviour, oviposition and parental care in a new species Nyctibatrachus kumbara sp. nov. which is described in the paper. Nyctibatrachus kumbara sp. nov. is a medium sized stream dwelling frog. It is distinct from the congeners based on a suite of morphological characters and substantially divergent in DNA sequences of the mitochondrial 16S rRNA gene. Males exhibit parental care by mud packing the egg clutch. Such parental care has so far not been described from any other frog species worldwide. Besides this, we emphasize that three co-occurring congeneric species of Nyctibatrachus, namely N. jog, N. kempholeyensis and Nyctibatrachus kumbara sp. nov. from the study site differ in breeding behaviour, which could represent a case of reproductive character displacement. These three species are distinct in their size, call pattern, reproductive behaviour, maximum number of eggs in a clutch, oviposition and parental care, which was evident from the statistical analysis. The study throws light on the reproductive behaviour of Nyctibatrachus kumbara sp. nov. and associated species to understand the evolution and adaptation of reproductive modes of anurans in general, and Nyctibatrachus in particular from the Western Ghats.

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The identification of sea bass (Centropristis) larvae to species is difficult because of similar morphological characters, spawning times, and overlapping species ranges. Black sea bass (Centropristis striata) is an important fishery species and is currently considered to be overfished south of Cape Hatteras, North Carolina. We describe methods for identifying three species of sea bass larvae using polymerase chain reaction (PCR) and restriction fragment length polymorphism (RFLP) assays based on species-specific amplification of rDNA internal transcribed spacer regions. The assays were tested against DNA of ten other co-occurring reef fish species to ensure the assay's specificity. Centropristis larvae were collected on three cruises during cross-shelf transects and were used to validate the assays. Seventy-six Centropristis larva were assayed and 69 (91%) were identified successfully. DNA was not amplified from 5% of the larvae and identification was inconclusive for 3% of the larvae. Those assays can be used to identify sea bass eggs and larvae and will help to assess spawning locations, spawning times, and larval dispersal.

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Developmental stages of 22 species representing 16 genera of agonid fishes occurring in the northeastern Pacific Ocean from San Francisco Bay to the Arctic Ocean are presented. Three of these species also occur in the North Atlantic Ocean. Larval stages of nine species are described for the first time. Additional information or illustrations intended to augment original descriptions are provided for eight species. Information on five other species is provided from the literature for comparative purposes. The primary objective of this guide is to present taxonomic characters to help identify the early life history stages of agonid fishes in field collections. Meristic, morphometric, osteological, and pigmentation characters are used to identify agonid larvae. Meristic features include numbers of median-fin elements, pectoral-fin rays, dermal plates, and vertebrae. Eye diameter, body depth at the pectoral-fin origin, snout to first dorsal-fin length, and pectoral-fin length are the most useful morphological characters. Presence, absence, numbers, and/or patterns of dermal plates in lateral rows or on the ventral surface of the gut are also useful. Other important characters are the presence, absence, numbers, and ornamentation of larval head spines. Lastly, distinct pigmentation patterns are often diagnostic. The potential utility of larval characters in phylogenetic analysis of the family Agonidae is discussed. (PDF file contains 92 pages.)

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Os Aulopiformes são peixes marinhos com amplitude temporal do Eocretáceo ao Recente. Os táxons fósseis são encontrados em depósitos sedimentares das Américas do Sul e do Norte, Europa, Ásia e África. Os representantes viventes podem ser encontrados desde águas rasas costeiras, estuários, até profundidades abissais, excedendo 3.000 m. Os limites do grupo, suas intra e inter-relações são objeto de muitos estudos. O objetivo central desta tese é aplicar métodos de Biogeografia Histórica como Panbiogeografia e a Análise de Parcimônia de Endemismos aos peixes Aulopiformes. Adicionalmente, foi realizada a análise filogenética dos Aulopiformes. Como resultado foram obtidos: 21 traços generalizados de Synodontoidei, 28 de Chlorophthalmoidei, 3 de Giganturoidei e 7 de Enchodontoidei. O clado Synodontoidei apresenta um padrão de distribuição primordialmente em águas tropicais e subtropicais, associado à borda de placas tectônicas e ao tipo de substrato. O clado Chlorophthalmoidei apresenta padrões de distribuição associados a cadeias de montanhas submarinas e corais de profundidade. O clado Giganturoidei possui uma distribuição vicariante com a família Giganturidae ocupando águas mais quentes e Bathysauridae as regiões mais frias. O clado Enchodontoidei foi associado a recifes de coral e zonas de ressurgência pretéritos. Adicionalmente, foi analisada uma matriz de dados com 84 táxons e 105 caracteres morfológicos não ordenados e sem pesagem a priori. Como resultado foram obtidas sete árvores igualmente parcimoniosas com 1214 passos, índice de consistência de 0,1129 e índice de retenção de 0,4970. A ordem Aulopiformes não constituiu um grupo monofilético, com as famílias Chlorophthalmidae, Notosudidae, Synodontidae, Paraulopidae, Pseudotrichonotidae e Ipnopidae mais proximamente relacionados ao Myctophidea que aos Alepisauroidei. Assim a partir da combinação dos resultados alcançados conclui-se que a Biogeografia Histórica funcionou como uma ferramenta na identificação dos problemas taxonômicos dos Aulopiformes e a sua análise filogenética permitiu identificar controvérsias sistemáticas, indicando que são necessários maiores estudos sobre a anatomia dos aulopiformes, a fim de esclarecer suas inter-relações.

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Larvae of the genus Icelinus are collected more frequently than any other sculpin larvae in ichthyoplankton surveys in the Gulf of Alaska and Bering Sea, and larvae of the northern sculpin (Icelinus borealis) are commonly found in the ichthyofauna in both regions. Northern sculpin are geographically isolated north of the Aleutian Islands, Alaska, which allows for a definitive description of its early life history development in the Bering Sea. A combination of morphological characters, pigmentation, preopercular spine pattern, meristic counts, and squamation in later developmental stages is essential to identify Icelinus to the species level. Larvae of northern sculpin have 35–36 myomeres, pelvic fins with one spine and two rays, a bony preopercular shelf, four preopercular spines, 3–14 irregular postanal ventral melanophores, few, if any, melanophores ventrally on the gut, and in larger specimens, two rows of ctenoid scales directly beneath the dorsal fins extending onto the caudal peduncle. The taxonomic characters of the larvae of northern sculpin in this study may help differentiate northern sculpin larvae from its congeners, and other sympatric sculpin larvae, and further aid in solving complex systematic relationships within the family Cottidae.

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The widespread and commercially important rougheye rockfish, Sebastes aleutianus (Jordan and Evermann, 1898), has been considered a single variable species, with light- and dark-colored forms, found on the outer continental shelf and upper slope of the North Pacific Ocean. Genetic analysis of 124 specimens verified the presence of two species in new specimens collected from Alaska to Oregon, and the two species were analyzed for distinguishing color patterns and morphological characters. Characters distinguishing the two were extended to an analysis of 215 additional formalin-fixed specimens representing their geographic ranges. Sebastes aleutianus is pale, often has dark mottling on the dorsum in diffuse bands, and does not have distinct dark spots on the spinous dorsal fin; it ranges from the eastern Aleutian Islands and southeastern Bering Sea to California. Sebastes melanostictus (Matsubara, 1934), the blackspotted rockfish, ranges from central Japan, through the Aleutian Islands and Bering Sea, to southern California. It is darker overall and spotting is nearly always present on the spinous dorsal fin. Sebastes swifti (Evermann and Goldsborough, 1907) is a synonym of S. aleutianus; S. kawaradae (Matsubara, 1934) is a synonym of S. melanostictus. The subgenus Zalopyr is restricted to S. aleutianus and S. melanostictus. Nomenclatural synonymies, diagnoses, descriptions, and distributions are provided for each species.

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Larval and juvenile rockfishes (Sebastes spp.) are difficult to identify using morphological characters. We developed a key based on sizes of restriction endonuclease fragments of the NADH dehydrogenase-3 and -4 (ND3/ND4) and 12S and 16S ribosomal RNA (12S/16S) mitochondrial regions. The key makes use of variation in the ND3/ND4 region. Restriction endonuclease Dde I variation can corroborate identifications, as can 12S/16S variation. The key, based on 71 species, includes most North American taxa, several Asian species, and Sebastolobus alascanus and Helicolenus hilgendorfi that are closely related to rockfishes. Fifty-eight of 71 rockfish species in our database can be distinguished unequivocally, using one to five restriction enzymes; identities of the remaining species are narrowed to small groups: 1) S. polyspinis, S. crameri, and S. ciliatus or variabilis (the two species could not be distinguished and were considered as a single species) ; 2) S. chlorostictus, S. eos, and S. rosenblatti; 3) S. entomelas and S. mystinus; 4)S. emphaeus, S. variegatus, and S. wilsoni; and 5) S. carnatus and S. chrysomelas.

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Machaerium é um dos maiores gêneros arbóreos tropicais de leguminosas, com cerca de 130 espécies com distribuição predominantemente neotropical e centro de diversidade no Brasil, onde ocorrem cerca de 80 espécies. O gênero ocorre em todos os domínios fitogeográficos do país, porém a Mata Atlântica e a Floresta Amazônica possuem os maiores índices de riqueza e endemismo. As espécies do gênero estão classificadas em cinco seções infragenéricas, que se baseiam principalmente na forma e venação dos folíolos e na presença de estípulas espinescentes. Entretanto, esta classificação tem sido questionada por alguns autores, principalmente quando comparada com análises filogenéticas. Dessa forma, surge a necessidade de buscar outros caracteres que auxiliem na delimitação das espécies e que permitam uma reavaliação na classificação nfragenéricas, além de conhecer o potencial para estudos dendrocronológicos das espécies em um bioma tão rico e ameaçado como a Mata Atlântica. O presente trabalho visou estudar a anatomia do lenho de onze espécies arbóreas de Machaerium a fim de verificar a consistência das seções infragenéricas, fornecer caracteres diagnósticos para a delimitação das espécies e caracterizar as pontoações intervasculares ornamentadas, para verificar seu potencial diagnóstico no gênero em questão. Além disso, analisar a periodicidade de crescimento e a influência dos fatores climáticos no crescimento de Machaerium incorruptibile, espécie endêmica da Mata Atlântica. As amostras foram coletadas através de método não destrutivo e processadas seguindo os métodos usuais para anatomia do lenho, microscopia eletrônica de varredura e dendrocronologia. As espécies apresentaram as características anatômicas descritas para a família Leguminosae e para a subfamília Papilionoideae. A presença de faixas de parênquima não lignificado, fibras de paredes delgadas e raios irregularmente estratificados foram importantes na separação de Machaerium hirtum das outras dez espécies. As dez espécies restantes foram separadas entre si pelos dados quantitativos do lenho, principalmente diâmetro e frequência de vasos, e também pelos caracteres morfológicos das pontoações ornamentadas, como a projeção ou não das ornamentações na abertura da pontoação. A anatomia da madeira não correspondeu as seções infragenéricas tradicionalmente tratadas para o gênero. Para a dendrocronologia os dados foram analisados com uso do software ARSTAN e foi construída uma cronologia para M. incorruptibile. As cronologias foram analisadas juntamente com os dados de precipitação e temperatura, onde observou-se uma correlação significativa com a temperatura. A largura dos anéis de crescimento foi correlacionada positivamente com a temperatura média da primavera, época em que a temperatura se encontra mais amena e, negativamente com a temperatura média do verão, onde as temperaturas são mais altas. Também houve correlação negativa entre os eventos mais severos de El Niño e a largura dos anéis de crescimento, demonstrando o efeito deste fenômeno no crescimento da população arbórea, como encontrado em outras espécies tropicais.

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The morphometric and morphological characters of the rostrum have been widely used to identify penaeid shrimp species (Heales et al., 1985; Dall et al., 1990; Pendrey et al., 1999). In this setting, one of the constraints in studies of penaeid shrimp populations has been the uncertainty in the identification of early life history stages, especially in coastal nursery habitats, where recruits and juveniles dominate the population (Dall et al., 1990; Pérez-Castañeda and Defeo, 2001). In the western Atlantic Ocean, Pérez-Farfante (1969, 1970, 1971a) described diagnostic characters of the genus Farfantepenaeus that allowed identification of individuals in the range of 8−20 mm CL (carapace length) on the basis of the following morphological features: 1) changes in the structure of the petasma and thelycum; 2) absence or presence of distomarginal spines in the ventral costa of the petasma; 3) the ratio between the keel height and the sulcus width of the sixth abdominal somite; 4) the shape and position of the rostrum with respect to the segments and flagellum of the antennule; and 5) the ratio between rostrum length (RL) and carapace length (RL/CL). In addition, she classified Farfantepenaeus into two groups according to the shape and position of the rostrum with respect to the segments and flagellum of the antennule and the ratio RL/CL: 1) F. duorarum and F. notialis: short rostrum, straight distally, and the proximodorsal margin convex, usually extending anteriorly to the end of distal antennular segment, sometimes reaching to proximal one-fourth of broadened portion of lateral antennular flagellum, with RL/CL <0.75; and 2) F. aztecus, F. brasiliensis, F. paulensis, and F. subtilis: long rostrum, usually almost straight along the entire length, extending anteriorly beyond the distal antennular segment, sometimes reaching to the distal one-third of broadened portion of lateral antennular flagellum, with RL/CL >0.80. Pérez-Farfante stressed that, for the recognition to species level of juveniles <10 mm CL, all the characters listed above should be considered because occasionally one alone may not prove to be diagnostic. However, the only characters that could be distinguished for small juveniles in the range 4−8 mm CL are those defined on the rostrum. Therefore, it has been almost impossible to identify and separate small specimens of Farfantepenaeus (Pérez-Farfante, 1970, 1971a; Pérez-Farfante and Kensley, 1997).