Regulatable and modulable background expression control in prokaryotic synthetic circuits by auxiliary repressor binding sites.

Expression control in synthetic genetic circuitry, for example, for construction of sensitive biosensors, is hampered by the lack of DNA parts that maintain ultralow background yet achieve high output upon signal integration by the cells. Here, we demonstrate how placement of auxiliary transcription factor binding sites within a regulatable promoter context can yield an important gain in signal-to-noise output ratios from prokaryotic biosensor circuits. As a proof of principle, we use the arsenite-responsive ArsR repressor protein from Escherichia coli and its cognate operator. Additional ArsR operators placed downstream of its target promoter can act as a transcription roadblock in a distance-dependent manner and reduce background expression of downstream-placed reporter genes. We show that the transcription roadblock functions both in cognate and heterologous promoter contexts. Secondary ArsR operators placed upstream of their promoter can also improve signal-to-noise output while maintaining effector dependency. Importantly, background control can be released through the addition of micromolar concentrations of arsenite. The ArsR-operator system thus provides a flexible system for additional gene expression control, which, given the extreme sensitivity to micrograms per liter effector concentrations, could be applicable in more general contexts.

Especiação de Arsênio - uma revisão

This paper provides a review on separation methods and analytical techniques for the determination of several species of organic and inorganic arsenic in different matrices. Arsenic is an element whose speciation is of particular interest due to the great variation of toxicity levels exhibited for its different chemical forms. Arsenic (III) and As (V) are the most toxic species while organic compounds such as arsenobetaine (AsB), produced by methylation of inorganics species (carcinogenics) are relatively less toxic, hence the great importance of arsenic speciation in the determination of the degree of contamination of an environmental or biological system.

A química do estanho no século 18, ou como uma consulta se transformou num projeto de pesquisa

An ominous suspicion arose in France in the second half of the 18th century, that household tin objects might be contaminated with arsenic. Charged with the task of studying and deciding the question, the chemists Pierre Bayen and Louis Charlard set up a comprehensive research project, which resulted in a book describing the whole enterprise. It is very gratifying to analyse this work today, for the many lights it sheds on the way chemistry was practised and reasoned at the time, and for the whiff of modernity we are presented with.

Determinação de As em amostras orgânicas de interesse ambiental por espectrometria de absorção atômica com atomização eletrotérmica após combustão em bomba de O2

The toxicity of the major As species present in the environment justifies the effort for quantifying the element in environmental organic samples, which can vary from animal and vegetal tissues to coal and industrial residues. This paper comments about the applicability of the O2 bomb digestion, as a general procedure for all environmental organic materials. A rapid and straightforward method is suggested, which consists in burning the sample in the bomb at high O2 pressure, dissolving the vapours in diluted HNO3 and determining As in the resulting solution by atomic absorption spectrometry with electrothermal atomization. The method was applied to certified materials and plant samples.

Especiação analítica de compostos de arsênio empregando métodos voltamétricos e polarográficos: uma revisão comparativa de suas principais vantagens e aplicações

This paper provides a review on voltammetric and polarographic methods for the speciation analysis of inorganic and organic arsenic compounds in different matrices. A discussion on the main advantages of electroanalytical methods in comparison with other analytical methods employed for arsenic speciation is presented. The mechanistic aspects of the most relevant techniques employing cathodic and anodic stripping voltammetry as well as polarographic methods published in the last twenty five years are summarized and discussed. The bibliographic references cited in this work were selected from the Web of Science (published by the ISI) and the main journals of analytical chemistry.

Flow analysis by using solenoid valves for As(III) determination in natural waters by an on-line separation and pre-concentration system coupled to a tungsten coil atomizer

A flow system coupled to a tungsten coil atomizer in an atomic absorption spectrometer (TCA-AAS) was developed for As(III) determination in waters, by extraction with sodium diethyldithiocarbamate (NaDDTC) as complexing agent, and by sorption of the As(III)-DDTC complex in a micro-column filled with 5 mg C18 reversed phase (10 µL dry sorbent), followed by elution with ethanol. A complete pre-concentration/elution cycle took 208 s, with 30 s sample load time (1.7 mL) and 4 s elution time (71 µL). The interface and software for the synchronous control of two peristaltic pumps (RUN/ STOP), an autosampler arm, seven solenoid valves, one injection valve, the electrothermal atomizer and the spectrometer Read function were constructed. The system was characterized and validated by analytical recovery studies performed both in synthetic solutions and in natural waters. Using a 30 s pre-concentration period, the working curve was linear between 0.25 and 6.0 µg L-1 (r = 0.9976), the retention efficiency was 94±1% (6.0 µg L-1), and the pre-concentration coefficient was 28.9. The characteristic mass was 58 pg, the mean repeatability (expressed as the variation coefficient) was 3.4% (n=5), the detection limit was 0.058 µg L-1 (4.1 pg in 71 µL of eluate injected into the coil), and the mean analytical recovery in natural waters was 92.6 ± 9.5 % (n=15). The procedure is simple, economic, less prone to sample loss and contamination and the useful lifetime of the micro-column was between 200-300 pre-concentration cycles.

Determinação de arsênio em águas contaminadas usando fluorescência de raios-X por energia dispersiva

This work proposes a simple, fast and inexpensive method to determine As in natural waters, using X-ray fluorescence. 50 µL of each sample containing 100 mg L-1 of yttrium as internal standard were deposited over a 2.5 µm thickness MylarTM film. The samples were dried at 50 °C for 2 h. X-ray spectra were obtained using an EDXRF apparatus. The accuracy was determined by analyte addition/recovery and by comparison with Hydride Generation Atomic Absorption Spectrometry (HG AAS). A recovery of about 100% was obtained and the results were in good agreement with HG AAS. The method showed a relative standard deviation of 6.8% and a detection limit of 10.5 µg L-1 of As.

Atomic diffusion induced by stress relaxation in InGaAs/GaAs epitaxial layers

The origin of the microscopic inhomogeneities in InxGa1-xAs layers grown on GaAs by molecular beam epitaxy is analyzed through the optical absorption spectra near the band gap. It is seen that, for relaxed thick layers of about 2.8μm, composition inhomogeneities are responsible for the band edge smoothing into the whole compositional range (0.05de of the composition variations and the mean strain

Utilização de zeólitas sintetizadas a partir de xisto retortado na remoção de arsênio em águas contaminadas

The solid by-product of the oil shale processing (PETROBRAS - Brazil) was used as raw material to synthesize zeolites A and faujasite. Alkaline fusion followed by hydrothermal treatment was the synthesis procedure used, and five different starting material compositions were obtained. The more crystalline zeolite-type materials synthesized, the pretreated oil shale ash and commercial zeolites were used as adsorbents in the purification of pollutant solutions with arsenic. The zeolite-type material composed of a mixture of zeolite A (42.6%) and faujasite (52.9%) presented an ion exchange capacity comparable to the pure zeolites A and faujasite, much better than the pretreated ash.

Design and evaluation of a continuous flow, integrated nebulizer-hydride generator for flame atomic absorption spectrometry

An evaluation of the performance of a continuous flow hydride generator-nebulizer for flame atomic absorption spectrometry was carried out. Optimization of nebulizer gas flow rate, sample acid concentration, sample and tetrahydroborate uptake rates and reductant concentration, on the As and Se absorbance signals was carried out. A hydrogen-argon flame was used. An improvement of the analytical sensitivity relative to the conventional bead nebulizer used in flame AA was obtained (2 (As) and 4.8 (Se) µg L-1). Detection limits (3σb) of 1 (As) and 1.3 (Se) µg L-1 were obtained. Accuracy of the method was checked by analyzing an oyster tissue reference material.

Elementos-traço e sódio em suco de uva: aspectos nutricionais e toxicológicos

Eight trace elements were determined in 20 Brazilian brands of grape juice, distributed over the country. Highest measured concentrations (As: 0.016; Cd: 0.010; Cr: 0.060; Cu: 1.28; Ni: 0.032; Pb: 0.016; Sb: 0.0040 and Zn: 1.44 mg L-1) comply with Brazilian maximal tolerance levels for inorganic contaminants (As: 0.5; Cd: 0.5; Cr: 0.1; Cu: 30; Ni: 3; Pb: 0.4; Sb: 1 and Zn: 25 mg L-1). Determination of arsenic species has shown inorganic As(V) as predominant in most samples. Sodium concentrations, nowadays a major public health concern, were also measured, showing an average of 149 mg L-1. Analytical results for this element were much higher than label concentrations, showing the need for better quality control.

Estudo da especiação de arsênio inorgânico e determinação de arsênio total no monitoramento ambiental da qualidade de águas subterrâneas

This work reports an alternative, fast and robust method, for the determination of total As, As(III) and As(V) by HG-AAS without the use of prereductants. The method is based on the different rates of arsine formation of the inorganic As species and the effect of As(III) in the signal obtained for total As. Groundwater and mineral spiked waters were used to sample preservation evaluation. The method was validated by the determination of As in SRM 1640 and used in the determination of total As and its inorganic species in groundwater samples collected from mines in the Iron Quadrangle - MG.

Fotocatálise heterogênea com TiO2 para oxidação de arsênio e sua remoção de águas por coprecipitação com sulfato férrico

The oxidation of arsenic (As(III) to As(V)) in water samples was performed by heterogeneous photocatalysis using a TiO2 film immobilized inside a photochemical reactor. After oxidation, As(V) was removed from the water samples by coprecipitation with ferric sulfate. The final conditions of oxidation and arsenic removal (TiO2 film prepared with a suspension: 10% (w/v); pH: 7.0; oxidation time: 30 min and Fe3+ concentration: 50 mg L-1) were applied in natural water samples which were supplemented with 1.0 mg L-1 of As(III) to verify the influence of the matrix. After treatment, more than 99% of arsenic was removed from the water.

Determinação de arsênio em amostras da cadeia produtiva de frangos de corte por espectrometria de absorção atômica com forno de grafite

Chicken meat is largely consumed in human nutrition and it is produced in extremely large scale in some countries, including Brazil. In this work graphite furnace atomic absorption spectrometry was used for determination of arsenic in chicken and chicken production-related samples. These samples were digested employing a microwave-assisted procedure in closed vessels using a 7 mol L-1 nitric acid solution plus concentrated hydrogen peroxide. The concentration range of total As determined in chicken production-related samples varied from 1.30 to 29.8 mg kg-1 of As. The detection and quantification limits reached were 0.055 and 0.182 mg kg-1, respectively (n = 15).

Espécies tropicais de pteridófitas em associação com fungos micorrízicos arbusculares em solo contaminado com arsênio

The symbiosis of plants with mycorrhizal fungi represents an alternative to be considered during the processes of revegetation and rehabilitation of arsenic-contaminated soil. The aim of this study was to evaluate under greenhouse conditions the effect of arsenic on the mycorrhizal association of two species of tropical fern (Thelypteris salzmannii and Dicranopteris flexuosa). T. salzmannii had higher rates of colonization and higher density of spores while D. flexuosa showed greater sensitivity to smaller concentrations of arsenic and association with mycorrhizal fungi. Our results indicate that screening and selection of mycorrhizal fungal isolates/species is possible and effective for phytoremediation of arsenic-contaminated soils.