Warming experiments underpredict plant phenological responses to climate change.

Warming experiments are increasingly relied on to estimate plant responses to global climate change. For experiments to provide meaningful predictions of future responses, they should reflect the empirical record of responses to temperature variability and recent warming, including advances in the timing of flowering and leafing. We compared phenology (the timing of recurring life history events) in observational studies and warming experiments spanning four continents and 1,634 plant species using a common measure of temperature sensitivity (change in days per degree Celsius). We show that warming experiments underpredict advances in the timing of flowering and leafing by 8.5-fold and 4.0-fold, respectively, compared with long-term observations. For species that were common to both study types, the experimental results did not match the observational data in sign or magnitude. The observational data also showed that species that flower earliest in the spring have the highest temperature sensitivities, but this trend was not reflected in the experimental data. These significant mismatches seem to be unrelated to the study length or to the degree of manipulated warming in experiments. The discrepancy between experiments and observations, however, could arise from complex interactions among multiple drivers in the observational data, or it could arise from remediable artefacts in the experiments that result in lower irradiance and drier soils, thus dampening the phenological responses to manipulated warming. Our results introduce uncertainty into ecosystem models that are informed solely by experiments and suggest that responses to climate change that are predicted using such models should be re-evaluated.

Uranium reserve, nuclear fuel cycle delusion, CO2 emission from the sea, and electricity supply: reflections after the fuel meltdown of Fukushima nuclear power units

The Great Tohoku-Kanto earthquake and resulting tsunami has brought considerable attention to the issue of the construction of new power plants. We argue in this paper, nuclear power is not a sustainable solution to energy problems. First, we explore the stock of uranium-235 and the different schemes developed by the nuclear power industry to exploit this resource. Second, we show that these methods, fast breeder and MOX fuel reactors, are not feasible. Third, we show that the argument that nuclear energy can be used to reduce CO2 emissions is false: the emissions from the increased water evaporation from nuclear power generation must be accounted for. In the case of Japan, water from nuclear power plants is drained into the surrounding sea, raising the water temperature which has an adverse affect on the immediate ecosystem, as well as increasing CO2 emissions from increased water evaporation from the sea. Next, a short exercise is used to show that nuclear power is not even needed to meet consumer demand in Japan. Such an exercise should be performed for any country considering the construction of additional nuclear power plants. Lastly, the paper is concluded with a discussion of the implications of our findings.

Re-opening the black box in societal metabolism: the application of MuSIASEM to water

In this paper we address the complexity of the analysis of water use in relation to the issue of sustainability. In fact, the flows of water in our planet represent a complex reality which can be studied using many different perceptions and narratives referring to different scales and dimensions of analysis. For this reason, a quantitative analysis of water use has to be based on analytical methods that are semantically open: they must be able to define what we mean with the term “water” when crossing different scales of analysis. We propose here a definition of water as a resource that deal with the many services it provides to humans and ecosystems. WE argue that water can fulfil so many of them since the element has many characteristics that allow for the resource to be labelled with different attributes, depending on the end use –such as drinkable. Since the services for humans and the functions for ecosystems associated with water flows are defined on different scales but still interconnected it is necessary to organize our assessment of water use across different hierarchical levels. In order to do so we define how to approach the study of water use in the Societal Metabolism, by proposing the Water Metabolism, tganized in three levels: societal level, ecosystem level and global level. The possible end uses we distinguish for the society are: personal/physiological use, household use, economic use. Organizing the study of “water use” across all these levels increases the usefulness of the quantitative analysis and the possibilities of finding relevant and comparable results. To achieve this result, we adapted a method developed to deal with multi-level, multi-scale analysis - the Multi-Scale Integrated Analysis of Societal and Ecosystem Metabolism (MuSIASEM) approach - to the analysis of water metabolism. In this paper, we discuss the peculiar analytical identity that “water” shows within multi-scale metabolic studies: water represents a flow-element when considering the metabolism of social systems (at a small scale, when describing the water metabolism inside the society) and a fund-element when considering the metabolism o ecosystems (at a larger scale when describing the water metabolism outside the society). The theoretical analysis is illustrated using two case which characterize the metabolic patterns regarding water use of a productive system in Catalonia and a water management policy in Andarax River Basin in Andalusia.

Effects of genetic alterations in arbuscular mycorrhizal fungi on plant growth and on their response to a change of host

Abstract :The majority of land plants form the symbiosis with arbuscular mycorrhizal fungi (AMF). The AM symbiosis has existed for hundreds of millions of years but little or no specificity seems to have co- evolved between the partners and only about 200 morphospecies of AMF are known. The fungi supply the plants most notably with phosphate in exchange for carbohydrates. The fungi improve plant growth, protect them against pathogens and herbivores and the symbiosis plays a key role in ecosystem productivity and plant diversity. The fungi are coenocytic, grow clonally and no sexual stage in their life cycle is known. For these reasons, they are presumed ancient asexuals. Evidence suggests that AMF contain populations of genetically different nucleotypes coexisting in a common cytoplasm. Consequently, the nucleotype content of new clonal offspring could potentially be altered by segregation of nuclei at spore formation and by genetic exchange between different AMF. Given the importance of AMF, it is surprising that remarkably little is known about the genetics and genomics of the fungi.The main goal of this thesis was to investigate the combined effects of plant species differences and of genetic exchange and segregation in AMF on the symbiosis. This work showed that single spore progeny can receive a different assortment of nucleotypes compared to their parent and compared to other single spore progeny. This is the first direct evidence that segregation occurs in AMF. We then showed that both genetic exchange and segregation can lead to new progeny that differentially alter plant growth compared to their parents. We also found that genetic exchange and segregation can lead to different development of the fungus during the establishment of the symbiosis. Finally, we found that a shift of host species can differentially alter the phenotypes and genotypes of AMF progeny obtained by genetic exchange and segregation compared to their parents.Overall, this study confirms the multigenomic state of the AMF Glomus intraradices because our findings are possible only if the fungus contains genetically different nuclei. We demonstrated the importance of the processes of genetic exchange and segregation to produce, in a very short time span, new progeny with novel symbiotic effects. Moreover, our results suggest that different host species could affect the fate of different nucleotypes following genetic exchange and segregation in AMF, and can potentially contribute to the maintenance of genetic diversity within AMF individuals. This work brings new insights into understanding how plants and fungi have coevolved and how the genetic diversity in AMF can be maintained. We recommend that the intra-ir1dividual AMF diversity and these processes should be considered in future research on this symbiosis.Résumé :La majorité des plantes terrestres forment des symbioses avec les champignons endomycorhiziens arbusculaires (CEA). Cette symbiose existe depuis plusieurs centaines de millions d'années mais peu ou pas de spécificité semble avoir co-évoluée entre les partenaires et seulement 200 morpho-espèces de CEA sont connues. Le champignon fournit surtout aux plantes du phosphate en échange de carbohydrates. Le champignon augmente la croissance des plantes, les protège contre des pathogènes et herbivores et la symbiose joue un rôle clé dans la productivité des écosystèmes et de la diversité des plantes. Les CEA sont coenocytiques, se reproduisent clonalement et aucune étape sexuée n'est connue dans leur cycle de vie. Pour ces raisons, ils sont présumés comme anciens asexués. Des preuves suggèrent que les CEA ont des populations de nucleotypes différents coexistant dans un cytoplasme commun. Par conséquent, le contenu en nucleotype des nouveaux descendants clonaux pourrait être altéré par la ségrégation des noyaux lors de la fonnation des spores et par l'échange génétique entre différents CEA. Etant donné l'importance des CEA, il est surprenant que si peu soit connu sur la génétique et la génomique du champignon.Le principal but de cette thèse a été d'étudier les effets combinés de différentes espèces de plantes et des mécanismes d'échange génétique et de ségrégation chez les CEA sur la symbiose. Ce travail a montré que chaque nouvelle spore produite pouvait recevoir un assortiment différent de noyaux comparé au parent ou comparé à d'autres nouvelles spores. Ceci est la première preuve directe que la ségrégation peut se produire chez les CEA. Nous avons ensuite montré qu'à la fois l'échange génétique et la ségrégation pouvaient mener à de nouveaux descendants qui altèrent différemment la croissance des plantes, comparé à leurs parents. Nous avons également trouvé que l'échange génétique et la ségrégation pouvaient entraîner des développements différents du champignon pendant l'établissement de la symbiose. Pour finir, nous avons trouvé qu'un changement d'espèce de l'hôte pouvait altérer différemment les phénotypes et génotypes des descendants issus d'échange génétique et de ségrégation, comparé à leurs parents.Globalement, cette étude confirme l'état multigénomique du CEA Glumus intraradices car nous résultats sont possibles seulement si le champignon possède des noyaux génétiquement différents. Nous avons démontrés l'importance des mécanismes d'échange génétique et de ségrégation pour produire en très peu de temps de nouveaux descendants ayant des effets symbiotiques nouveaux. De plus, nos résultats suggèrent que différentes espèces de plantes peuvent agir sur le devenir des nucleotypes après l'échange génétique et la ségrégation chez les CEA, et pourraient contribuer à la maintenance de la diversité génétique au sein d'un même CEA. Ce travail apporte des éléments nouveaux pour comprendre comment les plantes et les champignons ont coévolué et comment la diversité génétique chez les CEA peut être maintenue. Nous recommandons de considérer la diversité génétique intra-individuelle des CEA et ces mécanismes lors de futures recherches sur cette symbiose.

Reconstructing the origins of high-alpine niches and cushion life form in the genus Androsace S.L. (Primulaceae).

Relatively, few species have been able to colonize extremely cold alpine environments. We investigate the role played by the cushion life form in the evolution of climatic niches in the plant genus Androsace s.l., which spreads across the mountain ranges of the Northern Hemisphere. Using robust methods that account for phylogenetic uncertainty, intraspecific variability of climatic requirements and different life-history evolution scenarios, we show that climatic niches of Androsace s.l. exhibit low phylogenetic signal and that they evolved relatively recently and punctually. Models of niche evolution fitted onto phylogenies show that the cushion life form has been a key innovation providing the opportunity to occupy extremely cold environments, thus contributing to rapid climatic niche diversification in the genus Androsace s.l. We then propose a plausible scenario for the adaptation of plants to alpine habitats.

Béns i serveis associats als ecosistemes de fanerògames marines i estimacions de pèrdues causades per la seva degradació

Les praderies de posidònia de la costa catalana són ecosistemes d’alta importància, ja que tenint en compte la seva poca extensió, ens aporten una gran multiplicitat de béns i serveis ecosistèmics. No obstant, els danys observats en els prats en les últimes dècades, tant pel que fa a la regressió en superfície com a la pèrdua d’integritat ecològica, ens indiquen que aquests ecosistemes s’estan enfrontant a una crisi causada principalment per les pressions de les activitats antròpiques a les zones costaneres. En aquest projecte es pretenen identificar tots els béns i serveis que ens proporcionen aquests herbeis, així com també dictaminar quina és la importància de cada un d’ells en el context de la costa catalana. D’altra banda, es pretenen avaluar els impactes i conseqüències de la seva degradació i també quantificar, de manera relativa, la pèrdua d’aquests béns i serveis a la costa catalana, partint de la base que, segons els resultats obtinguts, la pèrdua d’abundància en els prats ha estat d’aproximadament el 60% des d’un hipotètic estat “pre-industrial” fins l’actualitat.

Estudio del ecosistema urbano de San José. Protocolo de monitoreo de aves y naturalización del Parque La Sabana

El papel de la ciudad en el futuro de la humanidad será transcendente, y es que el crecimiento actual de los espacios urbanos tiende, en general, a desbordar el sitio original de las ciudades, abarcando territorios cada vez más extensos y discontinuos. Y por este motivo es de vital importancia el estudio de la ciudad y de su entorno, el cual es sinónimo de ecosistema urbano. En el siguiente estudio se evalúa el ecosistema urbano de San José, capital de Costa Rica, dando énfasis en las zonas verdes presentes, en las relaciones con los ecosistemas naturales circundantes y como mejorar su capacidad ecológica. Por este motivo se ha analizado un proceso de rearborización en el Parque Metropolitano La Sabana, principal nódulo de carga de la trama urbana. Este esfuerzo de naturación dotará al parque de una mayor naturalización, con lo que se espera un aumento de la biodiversidad faunística. Para conocer estos cambios se crea un programa de monitoreo de aves con su respectivo protocolo.

La participación social como método de conservación. Estudio de caso en el área de conservación arenal Huetar norte de Costa Rica

El presente estudio se realiza con la intención de contribuir a establecer las bases para una buena gestión del territorio en el Área de conservación arenal Huetar norte de Costa Rica mediante la participación social; garantizando la conservación del capital natural y el desarrollo económico, social y ambientalmente sostenible. Para ello, se ha colaborado en la formación del Consejo Local del Corredor Biológico Ruta Los Malécu-Medio Queso (CL CBRLM-MQ) y del Refugio Nacional de Vida Silvestre Caño Negro (RNVSCN), formado por una coalición social que tendrá el objetivo de gestionar su propio territorio. Con la intención de capacitar a los integrantes de este consejo, y a los pobladores de la Zona Norte de Costa Rica en general, y orientarlos hacia la buena gestión de los recursos naturales, se ha realizado un análisis detallado sobre su percepción sobre los Servicios Ecosistémicos de la región. El resultado de este proyecto, es un manual de educación y comunicación ambiental sobre los servicios ecosistémicos de la Zona Norte para el educador/a. Con este manual se pretende capacitar a los pobladores sobre el valor de los SE, todo con la finalidad de promover cambios de actitudes y de conductas que fomenten una relación respetuosa con la naturaleza para alcanzar el desarrollo sostenible de la región y de esta manera mejorar la calidad de vida de los habitantes de esta zona.

Seguiment de l'evolució de la recuperació del bosc de ribera en la zona afectada per l'incendi del riu Canaletes del 20/07/2009. Proposta de campanya de voluntariat ambiental en rius per la custòdia i recuperació fluvial

El riu Canaletes va resultar afectat per l’ incendi que es va produir a Horta de Sant Joan el juliol de l’any 2009. El foc va malmetre bona part de la flora i fauna de la zona, però un dels ecosistemes que en va sortir més perjudicat va ser el del bosc de ribera, ecosistema molt fràgil en front de pertorbacions d’aquest tipus, ja que la seva capacitat de regeneració no és tant senzilla ni ràpida com en altres ecosistemes mediterranis com podrien ser els boscos de pi blanc. No obstant, si que existeixen algunes espècies de ribera que presenten una ràpida resposta als incendis com és el cas dels salzes o alguns pollancres o àlbers, que en aquest cas, poc temps després del foc ja presentaven rebrots, segons observacions realitzades al camp. Per comprovar l’evolució de la recuperació del bosc de ribera en la zona afectada per l’incendi, es van realitzar diverses sortides de camp. D’aquestes observacions, es va poder deduir que actualment el bosc de ribera de la zona estudiada, evoluciona segons les previsions realitzades en estudis immediatament posteriors al foc, de manera que hi estan proliferant de manera ràpida bardisses amb esbarzer, gavarrera, roldor i sanguinyol, en aquells llocs que abans de l’incendi eren ocupats per arbres caducifolis.

Canvis ambientals i relacions tròfiques en rius mediterranis

Els rius i rieres mediterranis són ecosistemes que es caracteritzen per fortes oscil•lacions de cabal i temperatura al llarg de l’any. Aquestes oscil•lacions provoquen canvis ambientals en l'hàbitat i en els recursos que afecten directament o indirecta la biota que habita aquests ecosistemes, la qual, per tant, ha de presentar adaptacions a aquestes oscil•lacions ambientals. L'escenari actual de canvi climàtic preveu una intensificació dels fenòmens de sequera i augment de temperatura. Entendre com la biota dels rius respon a aquestes fluctuacions és de gran importància per poder anticipar les respostes d'aquests sistemes als imminents canvis ambientals així com per gestionar adequadament els recursos hídrics en un futur. Els objectius principals d'aquesta tesi eren: caracteritzar estructural i funcionalment dues rieres intermitents mediterrànies al llarg dels diferents períodes característics del cicle anual i veure els efectes d'un augment de la sequera; veure com aquests efectes podien afectar l'ecosistema ripari circumdant i establir com diferències en la qualitat de la matèria orgànica derivades del canvi climàtic pot afectar el fitness i desenvolupament dels invertebrats. Aquests objectius s'han pogut complir només parcialment, ja que adversitats climàtiques van impedir finalitzar amb èxit la manipulació del cabal al camp i la resolució d'algunes dades no ha estat prou bona com per aplicar els models corresponents. Aquests contratemps s'han solucionat amb la incorporació de dos nous experiments (un encara s'ha de realitzar), fet que ha fet enlentir la finalització de la tesi.

Ablation of caterpillar labial salivary glands: technique for determining the role of saliva in insect-plant interactions.

There has been an ardent interest in herbivore saliva due to its roles in inducing plant defenses and its impact on herbivore fitness. Two techniques are described that inhibit the secretion of labial saliva from the caterpillar, Helicoverpa zea, during feeding. The methods rely on cauterizing the caterpillar's spinneret, the principal secretory structure of the labial glands, or surgically removing the labial salivary gland. Both methods successfully inhibit secretion of saliva and the principal salivary enzyme glucose oxidase. Caterpillars with inhibited saliva production feed at similar rates as the untreated caterpillars, pupate, and emerge as adults. Glucose oxidase has been suggested to increase the caterpillar's survival through the suppression of inducible anti-herbivore defenses in plants. Tobacco (Nicotiana tabacum) leaves fed on by caterpillars with ablated salivary glands had significantly higher levels of nicotine, an inducible anti-herbivore defense compound of tobacco, than leaves fed upon by caterpillars with intact labial salivary glands. Tomato (Lycopersicon esculentum) leaves fed upon by caterpillars with suppressed salivary secretions showed greatly reduced evidence of hydrogen peroxide formation compared to leaves fed upon by intact caterpillars. These two methods are useful techniques for determining the role that saliva plays in manipulating plant anti-herbivore defenses.

Detection of active oxalate-carbonate pathway ecosystems in the Amazon Basin: Global implications of a natural potential C sink

The oxalate-carbonate pathway (OCP) is a biogeochemical process, which has been described in Milicia excelsa tree ecosystems of Africa. This pathway involves biological and geological parameters at different scales: oxalate, as a by-product of photosynthesis, is oxidized by oxalotrophic bacteria leading to a local pH increase, and eventually to carbonate accumulation through time in previously acidic and carbonate-free tropical soils. Former studies have shown that this pedogenic process can potentially lead to the formation of an atmospheric carbon sink. Considering that 80% of plant species are known to produce oxalate, it is reasonable to assume that M. excelsa is not the only tree that can support OCP ecosystems. The search for similar conditions on another continent led us to South America, in an Amazon forest ecosystem (Alto Beni, Bolivia). This area was chosen because of the absence of local inherited carbonate in the bedrock, as well as its expected acidic soil conditions. Eleven tree species and associated soils were tested positive for the presence of carbonate with a more alkaline soil pH close to the tree than at a distance from it. A detailed study of Pentaplaris davidsmithii and Ceiba speciosa trees showed that oxalotrophy impacted soil pH in a similar way to at African sites (at least with 1 pH unit increasing). African and South American sites display similar characteristics regarding the mineralogical assemblage associated with the OCP, except for the absence of weddellite. The amount of carbonate accumulated is 3 to 4 times lower than the values measured in African sites related to M. excelsa ecosystems. Still, these secondary carbonates remain critical for the continental carbon cycle, as they are unexpected in the acidic context of Amazonian soils. Therefore, the present study demonstrates the existence of an active OCP in South America. The three critical components of an operating OCP are the presence of: i) local alkalinization, ii) carbonate accumulations, and iii) oxalotrophic bacteria, which were identified associated to the oxalogenic tree C. speciosa. If the question of a potential carbon sink related to oxalotrophic-oxalogenic ecosystems in the Amazon Basin is still pending, this study highlights the implication of OCP ecosystems on carbon and calcium biogeochemical coupled cycles. As previously mentioned for M. excelsa tree ecosystems in Africa, carbonate accumulations observed in the Bolivian tropical forest could be extrapolated to part or the whole Amazon Basin and might constitute an important reservoir that must be taken into account in the global carbon balance of the Tropics.

Predominance of Nonculturable Cells of the Biocontrol Strain Pseudomonas fluorescens CHA0 in the Surface Horizon of Large Outdoor Lysimeters.

The persistence of the biocontrol agent Pseudomonas fluorescens CHA0 in the surface horizon of 12 large outdoor lysimeters planted with winter wheat, Phacelia tanacetifolia followed by spring wheat, or maize was monitored for 1 year. Soil was inoculated with a spontaneous rifampin-resistant mutant (CHA0-Rif) of CHA0, and the strain was studied by using colony counts, Kogure's direct viable counts, and total counts (immunofluorescence). The number of culturable cells of the inoculant decreased progressively from 8 to 2 log CFU/g of soil or lower. However, culturable cells of CHA0-Rif accounted for less than 1% of the total cells of the inoculant 8 months after release in autumn. Since viable but nonculturable cells represented less than a quarter of the latter, most cells of CHA0-Rif in soil were thus inactive-dormant or dead at that time. Nonculturable cells of the inoculant were predominant also in the surface horizon of the lysimeters inoculated in the spring, and a significant fraction of them were viable. Results suggest that the occurrence of nonculturable cells of CHA0-Rif was influenced by climatic factors (water availability and soil temperature) and the abundance of roots in soil. The fact that the inoculant persisted as mixed populations of cells of different physiological states, in which nonculturable cells were predominant, needs to be taken into account when assessing the autecology of wild-type or genetically modified pseudomonads released into the soil ecosystem.

Future hotspots of terrestrial mammal loss.

Current levels of endangerment and historical trends of species and habitats are the main criteria used to direct conservation efforts globally. Estimates of future declines, which might indicate different priorities than past declines, have been limited by the lack of appropriate data and models. Given that much of conservation is about anticipating and responding to future threats, our inability to look forward at a global scale has been a major constraint on effective action. Here, we assess the geography and extent of projected future changes in suitable habitat for terrestrial mammals within their present ranges. We used a global earth-system model, IMAGE, coupled with fine-scale habitat suitability models and parametrized according to four global scenarios of human development. We identified the most affected countries by 2050 for each scenario, assuming that no additional conservation actions other than those described in the scenarios take place. We found that, with some exceptions, most of the countries with the largest predicted losses of suitable habitat for mammals are in Africa and the Americas. African and North American countries were also predicted to host the most species with large proportional global declines. Most of the countries we identified as future hotspots of terrestrial mammal loss have little or no overlap with the present global conservation priorities, thus confirming the need for forward-looking analyses in conservation priority setting. The expected growth in human populations and consumption in hotspots of future mammal loss mean that local conservation actions such as protected areas might not be sufficient to mitigate losses. Other policies, directed towards the root causes of biodiversity loss, are required, both in Africa and other parts of the world.

Healthy Gardening

Helping Local People and Local Communities create a Healthier Environment The healthy gardening project is a ten week programme which runs in community gardens/allotments throughout the county in partnership with community development projects. The underpinning values of the approach taken are holistic in nature and cover the areas of individual and community health and wellbeing, ecosystem health, environment and sustainablility. HSE and VEC Initiative Type Nutrition Education and Training Programmes Location Letterkenny Funding HSE and VEC Partner Agencies Community projects County council Family resource centre VEC Adult Education Service