Self-optimization of dense wireless sensor networks based on simulated annealing

Wireless sensor network (WSN) Is a technology that can be used to monitor and actuate on environments in a non-intrusive way. The main difference from WSN and traditional sensor networks is the low dependability of WSN nodes. In this way, WSN solutions are based on a huge number of cheap tiny nodes that can present faults in hardware, software and wireless communication. The deployment of hundreds of nodes can overcome the low dependability of individual nodes, however this strategy introduces a lot of challenges regarding network management, real-time requirements and self-optimization. In this paper we present a simulated annealing approach that self-optimize large scale WSN. Simulation results indicate that our approach can achieve self-optimization characteristics in a dynamic WSN. © 2012 IEEE.

Cooperative RNA Polymerase Molecules Behavior on a Stochastic Sequence-Dependent Model for Transcription Elongation

The transcription process is crucial to life and the enzyme RNA polymerase (RNAP) is the major component of the transcription machinery. The development of single-molecule techniques, such as magnetic and optical tweezers, atomic-force microscopy and single-molecule fluorescence, increased our understanding of the transcription process and complements traditional biochemical studies. Based on these studies, theoretical models have been proposed to explain and predict the kinetics of the RNAP during the polymerization, highlighting the results achieved by models based on the thermodynamic stability of the transcription elongation complex. However, experiments showed that if more than one RNAP initiates from the same promoter, the transcription behavior slightly changes and new phenomenona are observed. We proposed and implemented a theoretical model that considers collisions between RNAPs and predicts their cooperative behavior during multi-round transcription generalizing the Bai et al. stochastic sequence-dependent model. In our approach, collisions between elongating enzymes modify their transcription rate values. We performed the simulations in Mathematica® and compared the results of the single and the multiple-molecule transcription with experimental results and other theoretical models. Our multi-round approach can recover several expected behaviors, showing that the transcription process for the studied sequences can be accelerated up to 48% when collisions are allowed: the dwell times on pause sites are reduced as well as the distance that the RNAPs backtracked from backtracking sites. © 2013 Costa et al.

Development of a thermoeconomic methodology for the optimization of biodiesel production - Part I: Biodiesel plant and thermoeconomic functional diagram

This work developed a methodology that uses the thermoeconomic functional diagram applied for allocating the cost of products produced by a biodiesel plant. The first part of this work discusses some definitions of exergy and thermoeconomy, with a detailed description of the biodiesel plant studied, identification of the system functions through Physical Diagram, calculation of the irreversibilities of the plant, construction of the Thermoeconomic Functional Diagram and determination of the expressions for the plant's exergetic functions. In order to calculate the exergetic increments and the physical exergy of certain flows in each step, the Chemical Engineering Simulation Software HYSYS 3.2 was used. The equipments that have the highest irreversibilities in the plant were identified after the exergy calculation. It was also found that the lowest irreversibility in the system refers to the process with a molar ratio of 6:1 and a reaction temperature of 60 °C in the transesterification process. In the second part of this work (Part II), it was calculated the thermoeconomic cost of producing biodiesel and related products, including the costs of carbon credits for the CO2 that is not released into the atmosphere, when a percentage of biodiesel is added to the petroleum diesel used by Brazil's internal diesel fleet (case study). © 2013 Elsevier Ltd. All rights reserved.

Ergodic crossover in partially self-avoiding stochastic walks

Consider a one-dimensional environment with N randomly distributed sites. An agent explores this random medium moving deterministically with a spatial memory μ. A crossover from local to global exploration occurs in one dimension at a well-defined memory value μ1=log2N. In its stochastic version, the dynamics is ruled by the memory and by temperature T, which affects the hopping displacement. This dynamics also shows a crossover in one dimension, obtained computationally, between exploration schemes, characterized yet by the trajectory size (Np) (aging effect). In this paper we provide an analytical approach considering the modified stochastic version where the parameter T plays the role of a maximum hopping distance. This modification allows us to obtain a general analytical expression for the crossover, as a function of the parameters μ, T, and Np. Differently from what has been proposed by previous studies, we find that the crossover occurs in any dimension d. These results have been validated by numerical experiments and may be of great value for fixing optimal parameters in search algorithms. © 2013 American Physical Society.

Inversão de dados sísmicos de reflexão a partir da curva do tempo de trânsito

A presente Dissertação de Mestrado tem como objetivo o estudo do problema de inversão sísmica baseada em refletores planos para arranjo fonte-comum (FC) e ponto-médiocomum (PMC). O modelo direto é descrito por camadas homogêneas, isotrópicas com interfaces plano-horizontais. O problema é relacionado ao empilhamento NMO baseado na otimização da função semblance, para seções PMC corrigidas de sobretempo normal (NMO). O estudo foi baseado em dois princípios. O primeiro princípio adotado foi de combinar dois grupos de métodos de inversão: um Método Global e um Método Local. O segundo princípio adotado foi o de cascata, segundo a teoria Wichert-Herglotz-Bateman, que estabelece que para conhecer uma camada inferior tem-se que conhecer primeiro a camada superior (dissecação). A aplicação do estudo é voltada à simulação sísmica de Bacia Sedimentar do Solimões e de Bacia Marinha para se obter uma distribuição local 1D de velocidades e espessuras para a subsuperfície em horizontes alvo. Sendo assim, limitamos a inversão entre 4 e 11 refletores, uma vez que na prática a indústria limita uma interpretação realizada apenas em número equivalente de 3 a 4 refletores principais. Ressalta-se que este modelo é aplicável como condição inicial ao imageamento de seções sísmicas em regiões geologicamente complexas com variação horizontal suave de velocidades. Os dados sintéticos foram gerados a partir dos modelos relacionados a informações geológicas, o que corresponde a uma forte informação a priori no modelo de inversão. Para a construção dos modelos relacionados aos projetos da Rede Risco Exploratório (FINEP) e de formação de recursos humanos da ANP em andamento, analisamos os seguintes assuntos relevantes: (1) Geologia de bacias sedimentares terrestre dos Solimões e ma rinha (estratigráfica, estrutural, tectônica e petrolífera); (2) Física da resolução vertical e horizontal; e (3) Discretização temporal-espacial no cubo de multi-cobertura. O processo de inversão é dependente do efeito da discretização tempo-espacial do campo de ondas, dos parâmetros físicos do levantamento sísmico, e da posterior reamostragem no cubo de cobertura múltipla. O modelo direto empregado corresponde ao caso do operador do empilhamento NMO (1D), considerando uma topografia de observação plana. O critério básico tomado como referência para a inversão e o ajuste de curvas é a norma 2 (quadrática). A inversão usando o presente modelo simples é computacionalmente atrativa por ser rápida, e conveniente por permitir que vários outros recursos possam ser incluídos com interpretação física lógica; por exemplo, a Zona de Fresnel Projetada (ZFP), cálculo direto da divergência esférica, inversão Dix, inversão linear por reparametrização, informações a priori, regularização. A ZFP mostra ser um conceito út il para estabelecer a abertura da janela espacial da inversão na seção tempo-distância, e representa a influência dos dados na resolução horizontal. A estimativa da ZFP indica uma abertura mínima com base num modelo adotado, e atualizável. A divergência esférica é uma função suave, e tem base física para ser usada na definição da matriz ponderação dos dados em métodos de inversão tomográfica. A necessidade de robustez na inversão pode ser analisada em seções sísmicas (FC, PMC) submetida a filtragens (freqüências de cantos: 5;15;75;85; banda-passante trapezoidal), onde se pode identificar, comparar e interpretar as informações contidas. A partir das seções, concluímos que os dados são contaminados com pontos isolados, o que propõe métodos na classe dos considerados robustos, tendo-se como referência a norma 2 (quadrados- mínimos) de ajuste de curvas. Os algoritmos foram desenvolvidos na linguagem de programação FORTRAN 90/95, usando o programa MATLAB para apresentação de resultados, e o sistema CWP/SU para modelagem sísmica sintética, marcação de eventos e apresentação de resultados.

Optimization of the sampling scheme for maps of physical and chemical properties estimated by kriging

The sampling scheme is essential in the investigation of the spatial variability of soil properties in Soil Science studies. The high costs of sampling schemes optimized with additional sampling points for each physical and chemical soil property, prevent their use in precision agriculture. The purpose of this study was to obtain an optimal sampling scheme for physical and chemical property sets and investigate its effect on the quality of soil sampling. Soil was sampled on a 42-ha area, with 206 geo-referenced points arranged in a regular grid spaced 50 m from each other, in a depth range of 0.00-0.20 m. In order to obtain an optimal sampling scheme for every physical and chemical property, a sample grid, a medium-scale variogram and the extended Spatial Simulated Annealing (SSA) method were used to minimize kriging variance. The optimization procedure was validated by constructing maps of relative improvement comparing the sample configuration before and after the process. A greater concentration of recommended points in specific areas (NW-SE direction) was observed, which also reflects a greater estimate variance at these locations. The addition of optimal samples, for specific regions, increased the accuracy up to 2 % for chemical and 1 % for physical properties. The use of a sample grid and medium-scale variogram, as previous information for the conception of additional sampling schemes, was very promising to determine the locations of these additional points for all physical and chemical soil properties, enhancing the accuracy of kriging estimates of the physical-chemical properties.

Markovian versus non-Markovian stochastic quantization of a complex-action model

Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)

A Multi-Stage Stochastic Non-Linear Model for Reactive Power Planning Under Contingencies

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

A hybrid neutron diffraction and computer simulation study on the solvation of N-methylformamide in dimethylsulfoxide

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

A NS-2 simulation model for DNP3 protocol over IEEE 802.15.4 wireless protocol toward low cost simulation of Smart Grid applications

Faced with an imminent restructuring of the electric power system, over the past few years many countries have invested in a new paradigm known as Smart Grid. This paradigm targets optimization and automation of electric power network, using advanced information and communication technologies. Among the main communication protocols for Smart Grids we have the DNP3 protocol, which provides secure data transmission with moderate rates. The IEEE 802.15.4 is another communication protocol also widely used in Smart Grid, especially in the so-called Home Area Network (HAN). Thus, many applications of Smart Grid depends on the interaction of these two protocols. This paper proposes modeling, in the traditional network simulator NS-2, the integration of DNP3 protocol and the IEEE 802.15.4 wireless standard for low cost simulations of Smart Grid applications.

Light-by-light scattering with intact protons at the LHC: from standard model to new physics

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

Flavor physics in warped space

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

Transport and dynamical properties for a bouncing ball model with regular and stochastic perturbations

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

Quality and dose optimization in hand computed radiography

The objective of the present study was to optimize a radiographic technique for hand examinations using a computed radiography (CR) system and demonstrate the potential for dose reductions compared with clinically established technique. An exposure index was generated from the optimized technique to guide operators when imaging hands. Homogeneous and anthropomorphic phantoms that simulated a patient's hand were imaged using a CR system at various tube voltages and current settings (40-55 kVp, 1.25-2.8 mAs), including those used in clinical routines (50 kVp, 2.0 mAs) to obtain an optimized chart. The homogeneous phantom was used to assess objective parameters that are associated with image quality, including the signal difference-to-noise ratio (SdNR), which is used to define a figure of merit (FOM) in the optimization process. The anthropomorphic phantom was used to subjectively evaluate image quality using Visual Grading Analysis (VGA) that was performed by three experienced radiologists. The technique that had the best VGA score and highest FOM was considered the gold standard (GS) in the present study. Image quality, dose and the exposure index that are currently used in the clinical routine for hand examinations in our institution were compared with the GS technique. The effective dose reduction was 67.0%. Good image quality was obtained for both techniques, although the exposure indices were 1.60 and 2.39 for the GS and clinical routine, respectively.

Computer simulation study of collective dynamics in the glass former Ca(NO3)(2)center dot 4H(2)O

Time correlation functions of current fluctuations were calculated by molecular dynamics (MD) simulations in order to investigate sound waves of high wavevectors in the glass-forming liquid Ca(NO3)(2)center dot 4H(2)O. Dispersion curves, omega(k), were obtained for longitudinal (LA) and transverse acoustic (TA) modes, and also for longitudinal optic (LO) modes. Spectra of LA modes calculated by MD simulations were modeled by a viscoelastic model within the memory function framework. The viscoelastic model is used to rationalize the change of slope taking place at k similar to 0.3 angstrom(-1) in the omega(k) curve of acoustic modes. For still larger wavevectors, mixing of acoustic and optic modes is observed. Partial time correlation functions of longitudinal mass currents were calculated separately for the ions and the water molecules. The wavevector dependence of excitation energies of the corresponding partial LA modes indicates the coexistence of a relatively stiff subsystem made of cations and anions, and a softer subsystem made of water molecules. (C) 2012 American Institute of Physics. [http://dx.doi.org/10.1063/1.4751548]