Ocean acidification decreases the light-use efficiency in an Antarctic diatom under dynamic but not constant light, link to supplementary data

There is increasing evidence that different light intensities strongly modulate the effects of ocean acidification (OA) on marine phytoplankton. The aim of the present study was to investigate interactive effects of OA and dynamic light, mimicking natural mixing regimes. The Antarctic diatom Chaetoceros debilis was grown under two pCO2 (390 and 1000 latm) and light conditions (constant and dynamic), the latter yielding the same integrated irradiance over the day. To characterize interactive effects between treatments, growth, elemental composition, primary production and photophysiology were investigated. Dynamic light reduced growth and strongly altered the effects of OA on primary production, being unaffected by elevated pCO2 under constant light, yet significantly reduced under dynamic light. Interactive effects between OA and light were also observed for Chl production and particulate organic carbon (POC) quotas. Response patterns can be explained by changes in the cellular energetic balance. While the energy transfer efficiency from photochemistry to biomass production (Phi_e,C) was not affected by OA under constant light, it was drastically reduced under dynamic light. Contrasting responses under different light conditions need to be considered when making predictions regarding a more stratified and acidified future ocean.

Skeletal trade-offs in coralline algae in response to ocean acidification

Ocean acidification is changing the marine environment, with potentially serious consequences for many organisms. Much of our understanding of ocean acidification effects comes from laboratory experiments, which demonstrate physiological responses over relatively short timescales. Observational studies and, more recently, experimental studies in natural systems suggest that ocean acidification will alter the structure of seaweed communities. Here, we provide a mechanistic understanding of altered competitive dynamics among a group of seaweeds, the crustose coralline algae (CCA). We compare CCA from historical experiments (1981-1997) with specimens from recent, identical experiments (2012) to describe morphological changes over this time period, which coincides with acidification of seawater in the Northeastern Pacific. Traditionally thick species decreased in thickness by a factor of 2.0-2.3, but did not experience a change in internal skeletal metrics. In contrast, traditionally thin species remained approximately the same thickness but reduced their total carbonate tissue by making thinner inter-filament cell walls. These changes represent alternative mechanisms for the reduction of calcium carbonate production in CCA and suggest energetic trade-offs related to the cost of building and maintaining a calcium carbonate skeleton as pH declines. Our classification of stress response by morphological type may be generalizable to CCA at other sites, as well as to other calcifying organisms with species-specific differences in morphological types.

Flujo de potencia entre estructuras complejas sometidas a excitaciones de alta frecuencia y aplicaciones a la detección de daño estructural

El tema central de investigación en esta Tesis es el estudio del comportamientodinámico de una estructura mediante modelos que describen la distribución deenergía entre los componentes de la misma y la aplicación de estos modelos parala detección de daños incipientes.Los ensayos dinámicos son un modo de extraer información sobre las propiedadesde una estructura. Si tenemos un modelo de la estructura se podría ajustar éstepara que, con determinado grado de precisión, tenga la misma respuesta que elsistema real ensayado. Después de que se produjese un daño en la estructura,la respuesta al mismo ensayo variará en cierta medida; actualizando el modelo alas nuevas condiciones podemos detectar cambios en la configuración del modeloestructural que nos condujeran a la conclusión de que en la estructura se haproducido un daño.De este modo, la detección de un daño incipiente es posible si somos capacesde distinguir una pequeña variación en los parámetros que definen el modelo. Unrégimen muy apropiado para realizar este tipo de detección es a altas frecuencias,ya que la respuesta es muy dependiente de los pequeños detalles geométricos,dado que el tamaño característico en la estructura asociado a la respuesta esdirectamente proporcional a la velocidad de propagación de las ondas acústicas enel sólido, que para una estructura dada es inalterable, e inversamente proporcionala la frecuencia de la excitación. Al mismo tiempo, esta característica de la respuestaa altas frecuencias hace que un modelo de Elementos Finitos no sea aplicable enla práctica, debido al alto coste computacional.Un modelo ampliamente utilizado en el cálculo de la respuesta de estructurasa altas frecuencias en ingeniería es el SEA (Statistical Energy Analysis). El SEAaplica el balance energético a cada componente estructural, relacionando la energíade vibración de estos con la potencia disipada por cada uno de ellos y la potenciatransmitida entre ellos, cuya suma debe ser igual a la potencia inyectada a cadacomponente estructural. Esta relación es lineal y viene caracterizada por los factoresde pérdidas. Las magnitudes que intervienen en la respuesta se consideranpromediadas en la geometría, la frecuencia y el tiempo.Actualizar el modelo SEA a datos de ensayo es, por lo tanto, calcular losfactores de pérdidas que reproduzcan la respuesta obtenida en éste. Esta actualización,si se hace de manera directa, supone la resolución de un problema inversoque tiene la característica de estar mal condicionado. En la Tesis se propone actualizarel modelo SEA, no en término de los factores de pérdidas, sino en términos deparámetros estructurales que tienen sentido físico cuando se trata de la respuestaa altas frecuencias, como son los factores de disipación de cada componente, susdensidades modales y las rigideces características de los elementos de acoplamiento.Los factores de pérdidas se calculan como función de estos parámetros. Estaformulación es desarrollada de manera original en esta Tesis y principalmente sefunda en la hipótesis de alta densidad modal, es decir, que en la respuesta participanun gran número de modos de cada componente estructural.La teoría general del método SEA, establece que el modelo es válido bajounas hipótesis sobre la naturaleza de las excitaciones externas muy restrictivas,como que éstas deben ser de tipo ruido blanco local. Este tipo de carga es difícil dereproducir en condiciones de ensayo. En la Tesis mostramos con casos prácticos queesta restricción se puede relajar y, en particular, los resultados son suficientementebuenos cuando la estructura se somete a una carga armónica en escalón.Bajo estas aproximaciones se desarrolla un algoritmo de optimización por pasosque permite actualizar un modelo SEA a un ensayo transitorio cuando la carga esde tipo armónica en escalón. Este algoritmo actualiza el modelo no solamente parauna banda de frecuencia en particular sino para diversas bandas de frecuencia demanera simultánea, con el objetivo de plantear un problema mejor condicionado.Por último, se define un índice de daño que mide el cambio en la matriz depérdidas cuando se produce un daño estructural en una localización concreta deun componente. Se simula numéricamente la respuesta de una estructura formadapor vigas donde producimos un daño en la sección de una de ellas; como se tratade un cálculo a altas frecuencias, la simulación se hace mediante el Método delos Elementos Espectrales para lo que ha sido necesario desarrollar dentro de laTesis un elemento espectral de tipo viga dañada en una sección determinada. Losresultados obtenidos permiten localizar el componente estructural en que se haproducido el daño y la sección en que éste se encuentra con determinado grado deconfianza.AbstractThe main subject under research in this Thesis is the study of the dynamic behaviourof a structure using models that describe the energy distribution betweenthe components of the structure and the applicability of these models to incipientdamage detection.Dynamic tests are a way to extract information about the properties of astructure. If we have a model of the structure, it can be updated in order toreproduce the same response as in experimental tests, within a certain degree ofaccuracy. After damage occurs, the response will change to some extent; modelupdating to the new test conditions can help to detect changes in the structuralmodel leading to the conclusión that damage has occurred.In this way incipient damage detection is possible if we are able to detect srnallvariations in the model parameters. It turns out that the high frequency regimeis highly relevant for incipient damage detection, because the response is verysensitive to small structural geometric details. The characteristic length associatedwith the response is proportional to the propagation speed of acoustic waves insidethe solid, but inversely proportional to the excitation frequency. At the same time,this fact makes the application of a Finite Element Method impractical due to thehigh computational cost.A widely used model in engineering when dealing with the high frequencyresponse is SEA (Statistical Energy Analysis). SEA applies the energy balance toeach structural component, relating their vibrational energy with the dissipatedpower and the transmitted power between the different components; their summust be equal to the input power to each of them. This relationship is linear andcharacterized by loss factors. The magnitudes considered in the response shouldbe averaged in geometry, frequency and time.SEA model updating to test data is equivalent to calculating the loss factorsthat provide a better fit to the experimental response. This is formulated as an illconditionedinverse problem. In this Thesis a new updating algorithm is proposedfor the study of the high frequency response regime in terms of parameters withphysical meaning such as the internal dissipation factors, modal densities andcharacteristic coupling stiffness. The loss factors are then calculated from theseparameters. The approach is developed entirely in this Thesis and is mainlybased on a high modal density asumption, that is to say, a large number of modescontributes to the response.General SEA theory establishes the validity of the model under the asumptionof very restrictive external excitations. These should behave as a local white noise.This kind of excitation is difficult to reproduce in an experimental environment.In this Thesis we show that in practical cases this assumption can be relaxed, inparticular, results are good enough when the structure is excited with a harmonicstep function.Under these assumptions an optimization algorithm is developed for SEAmodel updating to a transient test when external loads are harmonic step functions.This algorithm considers the response not only in a single frequency band,but also for several of them simultaneously.A damage index is defined that measures the change in the loss factor matrixwhen a damage has occurred at a certain location in the structure. The structuresconsidered in this study are built with damaged beam elements; as we are dealingwith the high frequency response, the numerical simulation is implemented witha Spectral Element Method. It has therefore been necessary to develop a spectralbeam damaged element as well. The reported results show that damage detectionis possible with this algorithm, moreover, damage location is also possible withina certain degree of accuracy.

Pushover analysis for the seismic response prediction of cable-stayed bridges under multi-directional excitation

Cable-stayed bridges represent nowadays key points in transport networks and their seismic behavior needs to be fully understood, even beyond the elastic range of materials. Both nonlinear dynamic (NL-RHA) and static (pushover) procedures are currently available to face this challenge, each with intrinsic advantages and disadvantages, and their applicability in the study of the nonlinear seismic behavior of cable-stayed bridges is discussed here. The seismic response of a large number of finite element models with different span lengths, tower shapes and class of foundation soil is obtained with different procedures and compared. Several features of the original Modal Pushover Analysis (MPA) are modified in light of cable-stayed bridge characteristics, furthermore, an extension of MPA and a new coupled pushover analysis (CNSP) are suggested to estimate the complex inelastic response of such outstanding structures subjected to multi-axial strong ground motions.

Towards dynamic term size computation via program transformation

Knowing the size of the terms to which program variables are bound at run-time in logic programs is required in a class of applications related to program optimization such as, for example, recursion elimination and granularity analysis. Such size is difficult to even approximate at compile time and is thus generally computed at run-time by using (possibly predefined) predicates which traverse the terms involved. We propose a technique based on program transformation which has the potential of performing this computation much more efficiently. The technique is based on finding program procedures which are called before those in which knowledge regarding term sizes is needed and which traverse the terms whose size is to be determined, and transforming such procedures so that they compute term sizes "on the fly". We present a systematic way of determining whether a given program can be transformed in order to compute a given term size at a given program point without additional term traversal. Also, if several such transformations are possible our approach allows finding minimal transformations under certain criteria. We also discuss the advantages and present some applications of our technique.

Mutual Information and Perplexity based Clustering of Dialogue Information for Dynamic Adaptation of Language Models

We present two approaches to cluster dialogue-based information obtained by the speech understanding module and the dialogue manager of a spoken dialogue system. The purpose is to estimate a language model related to each cluster, and use them to dynamically modify the model of the speech recognizer at each dialogue turn. In the first approach we build the cluster tree using local decisions based on a Maximum Normalized Mutual Information criterion. In the second one we take global decisions, based on the optimization of the global perplexity of the combination of the cluster-related LMs. Our experiments show a relative reduction of the word error rate of 15.17%, which helps to improve the performance of the understanding and the dialogue manager modules.

A technique for dynamic term size computation via program transformation

Knowing the size of the terms to which program variables are bound at run-time in logic programs is required in a class of applications related to program optimization such as, for example, granularity analysis and selection among different algorithms or control rules whose performance may be dependent on such size. Such size is difficult to even approximate at compile time and is thus generally computed at run-time by using (possibly predefined) predicates which traverse the terms involved. We propose a technique based on program transformation which has the potential of performing this computation much more efficiently. The technique is based on finding program procedures which are called before those in which knowledge regarding term sizes is needed and which traverse the terms whose size is to be determined, and transforming such procedures so that they compute term sizes "on the fly". We present a systematic way of determining whether a given program can be transformed in order to compute a given term size at a given program point without additional term traversal. Also, if several such transformations are possible our approach allows finding minimal transformations under certain criteria. We also discuss the advantages and applications of our technique and present some performance results.

Dynamic term size computation in logic programs via program transformation

Knowing the size of the terms to which program variables are bound at run-time in logic programs is required in a class of applications related to program optimization such as, for example, recursion elimination and granularity analysis. Such size is difficult to even approximate at compile time and is thus generally computed at run-time by using (possibly predefined) predicates which traverse the terms involved. We propose a technique based on program transformation which has the potential of performing this computation much more efficiently. The technique is based on finding program procedures which are called before those in which knowledge regarding term sizes is needed and which traverse the terms whose size is to be determined, and transforming such procedures so that they compute term sizes "on the fly". We present a systematic way of determining whether a given program can be transformed in order to compute a given term size at a given program point without additional term traversal. Also, if several such transformations are possible our approach allows finding minimal transformations under certain criteria. We also discuss the advantages and present some applications of our technique.

Optimal and Long-Term Dynamic Transport Policy Design: Seeking Maximum Social Welfare through a Pricing Scheme.

This article presents an alternative approach to the decision-making process in transport strategy design. The study explores the possibility of integrating forecasting, assessment and optimization procedures in support of a decision-making process designed to reach the best achievable scenario through mobility policies. Long-term evaluation, as required by a dynamic system such as a city, is provided by a strategic Land-Use and Transport Interaction (LUTI) model. The social welfare achieved by implementing mobility LUTI model policies is measured through a cost-benefit analysis and maximized through an optimization process throughout the evaluation period. The method is tested by optimizing a pricing policy scheme in Madrid on a cordon toll in a context requiring system efficiency, social equity and environmental quality. The optimized scheme yields an appreciable increase in social surplus through a relatively low rate compared to other similar pricing toll schemes. The results highlight the different considerations regarding mobility impacts on the case study area, as well as the major contributors to social welfare surplus. This leads the authors to reconsider the cost-analysis approach, as defined in the study, as the best option for formulating sustainability measures.

A computer program for the analysis of the dynamic bending-torsion coupling in bridges using a mini-computer

The analysis of modes and natural frequencies is of primary interest in the computation of the response of bridges. In this article the transfer matrix method is applied to this problem to provide a computer code to calculate the natural frequencies and modes of bridge-like structures. The Fortran computer code is suitable for running on small computers and results are presented for a railway bridge.

Multiobjective optimization applied to structural sizing of low cost university-class microsatellite projects

In recent years, there has been continuing interest in the participation of university research groups in space technology studies by means of their own microsatellites. The involvement in such projects has some inherent challenges, such as limited budget and facilities. Also, due to the fact that the main objective of these projects is for educational purposes, usually there are uncertainties regarding their in orbit mission and scientific payloads at the early phases of the project. On the other hand, there are predetermined limitations for their mass and volume budgets owing to the fact that most of them are launched as an auxiliary payload in which the launch cost is reduced considerably. The satellite structure subsystem is the one which is most affected by the launcher constraints. This can affect different aspects, including dimensions, strength and frequency requirements. In this paper, the main focus is on developing a structural design sizing tool containing not only the primary structures properties as variables but also the system level variables such as payload mass budget and satellite total mass and dimensions. This approach enables the design team to obtain better insight into the design in an extended design envelope. The structural design sizing tool is based on analytical structural design formulas and appropriate assumptions including both static and dynamic models of the satellite. Finally, a Genetic Algorithm (GA) multiobjective optimization is applied to the design space. The result is a Pareto-optimal based on two objectives, minimum satellite total mass and maximum payload mass budget, which gives a useful insight to the design team at the early phases of the design.

The scaled-time test as an alternative to the pseudo-dynamic test

The stepped and excessively slow execution of pseudo-dynamic tests has been found to be the source of some errors arising from strain-rate effect and stress relaxation. In order to control those errors, a new continuous test method which allows the selection of a more suitable time scale factor in the response is proposed in this work. By dimensional analysis, such scaled-time response is obtained theoretically by augmenting the inertial and damping properties of the structure, for which we propose the use of hydraulic pistons which are servo-controlled to produce active mass and damping, nevertheless using an equipment which is similar to that required in a pseudo-dynamic test. The results of the successful implementation of this technique for a simple specimen are shown here.

Efficient design and optimization of bio-photonic sensing cells (BICELLs) for label free biosensing

In previous works we demonstrated the benefits of using micro–nano patterning materials to be used as bio-photonic sensing cells (BICELLs), referred as micro–nano photonic structures having immobilized bioreceptors on its surface with the capability of recognizing the molecular binding by optical transduction. Gestrinone/anti-gestrinone and BSA/anti-BSA pairs were proven under different optical configurations to experimentally validate the biosensing capability of these bio-sensitive photonic architectures. Moreover, Three-Dimensional Finite Difference Time Domain (FDTD) models were employed for simulating the optical response of these structures. For this article, we have developed an effective analytical simulation methodology capable of simulating complex biophotonic sensing architectures. This simulation method has been tested and compared with previous experimental results and FDTD models. Moreover, this effective simulation methodology can be used for efficiently design and optimize any structure as BICELL. In particular for this article, six different BICELL's types have been optimized. To carry out this optimization we have considered three figures of merit: optical sensitivity, Q-factor and signal amplitude. The final objective of this paper is not only validating a suitable and efficient optical simulation methodology but also demonstrating the capability of this method for analyzing the performance of a given number of BICELLs for label-free biosensing.

Resilience analysis of networked systems-of-systems based on structural and dynamic interdependencies

Critical infrastructures support everyday activities in modern societies, facilitating the exchange of services and quantities of various nature. Their functioning is the result of the integration of diverse technologies, systems and organizations into a complex network of interconnections. Benefits from networking are accompanied by new threats and risks. In particular, because of the increased interdependency, disturbances and failures may propagate and render unstable the whole infrastructure network. This paper presents a methodology of resilience analysis of networked systems of systems. Resilience generalizes the concept of stability of a system around a state of equilibrium, with respect to a disturbance and its ability of preventing, resisting and recovery. The methodology provides a tool for the analysis of off-equilibrium conditions that may occur in a single system and propagate through the network of dependencies. The analysis is conducted in two stages. The first stage of the analysis is qualitative. It identifies the resilience scenarios, i.e. the sequence of events, triggered by an initial disturbance, which include failures and the system response. The second stage is quantitative. The most critical scenarios can be simulated, for the desired parameter settings, in order to check if they are successfully handled, i.e recovered to nominal conditions, or they end into the network failure. The proposed methodology aims at providing an effective support to resilience-informed design.

Influence of the Second Flexural Mode on the Response of High-Speed Bridges

This paper deals with the assessment of the contribution of the second flexural mode to the dynamic behaviour of simply supported railway bridges. Alluding to the works of other authors, it is suggested in some references that the dynamic behaviour of simply supported bridges could be adequately represented taking into account only the contribution of the fundamental flexural mode. On the other hand, the European Rail Research Institute (ERRI) proposes that the second mode should also be included whenever the associated natural frequency is lower than 30 Hz]. This investigation endeavours to clarify the question as much as possible by establishing whether the maximum response of the bridge, in terms of displacements, accelerations and bending moments, can be computed accurately not taking account of the contribution of the second mode. To this end, a dimensionless formulation of the equations of motion of a simply supported beam traversed by a series of equally spaced moving loads is presented. This formulation brings to light the fundamental parameters governing the behaviour of the beam: damping ratio, dimensionless speed $ \alpha$=VT/L, and L/d ratio (L stands for the span of the beam, V for the speed of the train, T represents the fundamental period of the bridge and d symbolises the distance between consecutive loads). Assuming a damping ratio equal to 1%, which is a usual value for prestressed high-speed bridges, a parametric analysis is conducted over realistic ranges of values of $ \alpha$ and L/d. The results can be extended to any simply supported bridge subjected to a train of equally spaced loads in virtue of the so-called Similarity Formulae. The validity of these formulae can be derived from the dimensionless formulation mentioned above. In the parametric analysis the maximum response of the bridge is obtained for one thousand values of speed that cover the range from the fourth resonance of the first mode to the first resonance of the second mode. The response at twenty-one different locations along the span of the beam is compared in order to decide if the maximum can be accurately computed with the sole contribution of the fundamental mode.