Implementation of DNA markers to produce genomically - Enhanced EPDs in nellore cattle

Background: The sequencing and publication of the cattle genome and the identification of single nucleotide polymorphism (SNP) molecular markers have provided new tools for animal genetic evaluation and genomic-enhanced selection. These new tools aim to increase the accuracy and scope of selection while decreasing generation interval. The objective of this study was to evaluate the enhancement of accuracy caused by the use of genomic information (Clarifide® - Pfizer) on genetic evaluation of Brazilian Nellore cattle. Review: The application of genome-wide association studies (GWAS) is recognized as one of the most practical approaches to modern genetic improvement. Genomic selection is perhaps most suited to the improvement of traits with low heritability in zebu cattle. The primary interest in livestock genomics has been to estimate the effects of all the markers on the chip, conduct cross-validation to determine accuracy, and apply the resulting information in GWAS either alone [9] or in combination with bull test and pedigree-based genetic evaluation data. The cost of SNP50K genotyping however limits the commercial application of GWAS based on all the SNPs on the chip. However, reasonable predictability and accuracy can be achieved in GWAS by using an assay that contains an optimally selected predictive subset of markers, as opposed to all the SNPs on the chip. The best way to integrate genomic information into genetic improvement programs is to have it included in traditional genetic evaluations. This approach combines traditional expected progeny differences based on phenotype and pedigree with the genomic breeding values based on the markers. Including the different sources of information into a multiple trait genetic evaluation model, for within breed dairy cattle selection, is working with excellent results. However, given the wide genetic diversity of zebu breeds, the high-density panel used for genomic selection in dairy cattle (Ilumina Bovine SNP50 array) appears insufficient for across-breed genomic predictions and selection in beef cattle. Today there is only one breed-specific targeted SNP panel and genomic predictions developed using animals across the entire population of the Nellore breed (www.pfizersaudeanimal.com), which enables genomically - enhanced selection. Genomic profiles are a way to enhance our current selection tools to achieve more accurate predictions for younger animals. Material and Methods: We analyzed the age at first calving (AFC), accumulated productivity (ACP), stayability (STAY) and heifer pregnancy at 30 months (HP30) in Nellore cattle fitting two different animal models; 1) a traditional single trait model, and 2) a two-trait model where the genomic breeding value or molecular value prediction (MVP) was included as a correlated trait. All mixed model analyses were performed using the statistical software ASREML 3.0. Results: Genetic correlation estimates between AFC, ACP, STAY, HP30 and respective MVPs ranged from 0.29 to 0.46. Results also showed an increase of 56%, 36%, 62% and 19% in estimated accuracy of AFC, ACP, STAY and HP30 when MVP information was included in the animal model. Conclusion: Depending upon the trait, integration of MVP information into genetic evaluation resulted in increased accuracy of 19% to 62% as compared to accuracy from traditional genetic evaluation. GE-EPD will be an effective tool to enable faster genetic improvement through more dependable selection of young animals.

Productivity characteristics of endive as a function of spacing

Endive (Cichorium intybus) is one of the vegetables least studied in Brazil with respect to the behavior of the most commercialized cultivars, but it is known that the number of plants per area is one of the factors that most influences the productivity of various crops. Thus, the objective of this work was to evaluate the behavior of endive using four spacings between rows and five spacings between plants, in the region of Jaboticabal-SP. The experiment was conducted in the field in the period of August 12, 2008 to November 6, 2008, in the experimental area of the Sector of Vegetable Crops and Aromatic-Medicinal Plants, Department of Crop Sciences, School of Agricultural and Veterinary Sciences - UNESP-FCAV. The experimental design utilized was a randomized block design with a 4 × 5 factorial scheme, i.e., four spacings between rows (0.15, 0.20, 0.25 and 0.30 m) and five spacings between plants (0.10, 0.15, 0.20, 0.25 and 0.30 m), with three repetitions. The endive cultivar studied was 'Pão-de-Acucar', obtained from the company Tecnoseed. Seedlings were established utilizing the sowing system in 200-cell Styrofoam trays containing the substrate Plantmax Vegetables® HA. The seedlings were transplanted at 37 days after planting. After harvesting, the following characteristics were determined: height (cm), diameter of the plant in rows (cm), diameter of the plant in between rows (cm), number of leaves, fresh weight (g) and total estimated productivity (t/ha). There were no interactions between the factors studied. Based on the data, we conclude that spacings of 0.15 m between rows and of 0.15 m between plants produce plants of higher quality and with greater productivity.

Productivity, technology and domestic efforts in research and development (the growth-path of a Rayon plant)

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Water productivity assessment by using MODIS images and agrometeorological data in the Petrolina municipality, Brazil

The municipality of Petrolina, located in the semi-arid region of Brazil, is highlighted as an important agricultural growing region, however the irrigated areas have cleared natural vegetation inducing a loss of biodiversity. To analyze the contrast between these two ecosystems the large scale values of biomass production (BIO), evapotranspiration (ET) and water productivity (WP) were quantified. Monteithś equation was applied for estimating the absorbed photosynthetically active radiation (APAR), while the new SAFER (Simple Algorithm For Evapotranspiration Retrieving) algorithm was used to retrieve ET. The water productivity (WP) was analysed by the ratio of BIO by ET at monthly time scale with four bands of MODIS satellite images together with agrometeorological data for the year of 2011. The period with the highest water productivity values were from March to April in the rainy period for both irrigated and not irrigated conditions. However the largest ET rates were in November for irrigated crops and April for natural vegetation. More uniformity of the vegetation and water variables occurs in natural vegetation, evidenced by the lower values of standard deviation when comparing to irrigated crops, due to the different crop stages, cultural and irrigation managements. The models applied with MODIS satellite images on a large scale are considered to be suitable for water productivity assessments and for quantifying the effects of increasing irrigated areas over natural vegetation on regional water consumption in situations of quick changing land use pattern. © 2012 SPIE.

Relationship between citrus productivity and indicators of uniformity in trickle irrigation system

In trickle irrigation systems, the design is based on the pre-established emission uniformity (EU) which is the combined result of the equipment characteristics and its hydraulic configuration. However, this desired value of the EU may not be confirmed by the final project (in field conditions) and neither by the yield uniformity. The hypotheses of this research were: a) the EU of a trickle irrigation system at field conditions is equal to the emission uniformity pre-established in the its design; b) EU has always the lowest value when compared with other indicators of uniformity; c) the discharge variation coefficient (VC) is not equal to production variation coefficient in the operational unit; d) the difference between the discharge variation coefficient and the productivity variation coefficient depends on the water depth applied. This study aimed to evaluate the relationship between EU used in the irrigation system design and the final yield uniformity. The uniformity indicators evaluated were: EU, distribution uniformity (UD) and the index proposed by Barragan & Wu (2005). They were compared estimating the performance of a trickle irrigation system applied in a citrus orchard with dimensions of 400m x 600m. The design of the irrigation system was optimized by a Linear Programming model. The tree rows were leveled in the larger direction and the spacing adopted in the orchard was 7m x 4m. The manifold line was always operating on a slope condition. The sensitivity analysis involved different slopes, 0, 3, 6, 9 and 12%, and different values of emission uniformity, 60, 70, 75, 80, 85, 90 and 94%. The citrus yield uniformity was evaluated by the variation coefficient. The emission uniformity (EU) after design differed from the EU pre-established, more sharply in the initial values lower than 90%. Comparing the uniformity indexes, the EU always generated lower values when compared with the UD and with the index proposed by Barragan. The emitter variation coefficient was always lower than the productivity variation coefficient. To obtain uniformity of production, it is necessary to consider the irrigation system uniformity and mainly the water depth to be applied.

Productivity and water suppression in different beans (Phaseolus vulgaris L.) phenological stages

Common Bean (Phaseolus vulgaris L.) is widespread in the social and economic scene in Brazil, as well it is Brazilian population main dish, and it also helps small and medium farmers' income. The objective of this study was to compare the productivity performance of common bean Carioca - IAC Alvorada with irrigation suppression in each of the five phenological phases. The experiment was conducted in plots in a greenhouse at College of Agronomical Sciences, São Paulo State University (UNESP), Botucatu - SP. The hypothesis is that if the water supply is suppressed in one of the five development stages of irrigated common beans, the yield reduction would be at least 20%. The treatments consisted of suppression irrigation in one of the five development stages (stage V1 to V3, stage V4 to early flowering, flowering stage, pod formation stage and pod filling stage) compared with the irrigation at all stages and suppression of irrigation at all stages, with seven treatments and four replications. The treatments most affected by water suppression were those which suffered suppression of irrigation during the vegetative phase and flowering stage. Treatments with water suppression in all stages, and suppression during the phases (stage V1 to V3, stage V4 to early flowering, flowering stage, pod formation stage and pod filling stage) showed yield reduction of approximately 95%, 55.1%, 49.5%, 63,1%, 30.2% and 35.6%, respectively, when compared to treatment with irrigation all stages. All treatments considered confirmed the hypothesis.

Productivity: agriculture compared with the economy at large

Includes bibliography

Women: productivity and labour in the United States

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Productivity, growth and industrial exports in Brazil

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Structural changes and productivity in Latin American industry, 1970-1996

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Sectoral regimes, productivity and international competitiveness

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Atmospheric plasma treatment of carbon fibers for enhancement of their adhesion properties

Plasma processing of carbon fibers (CFs) is aimed to provide better contact and adhesion between individual plies without decrease in the CF mechanical resistance. This paper deals with surface modification of CFs by an atmospheric pressure dielectric barrier discharge (DBD) for enhancing the adhesion between the CF and the polymeric matrix. The scanning electron microscopy of the treated samples revealed many small particles distributed over entire surface of the fiber. These particles are product of the fiber surface etching during the DBD treatment that removes the epoxy layer covering as-received samples. The alteration of the CF surface morphology was also confirmed by the Atomic force microscopy (AFM), which indicated that the CF roughness increased as a result of the plasma treatment. The analysis of the surface chemical composition provided by X-ray photoelectron spectroscopy showed that oxygen and nitrogen atoms are incorporated onto the surface. The polar oxygen groups formed on the surface lead to the increasing of the CF surface energy. The results of interlaminar shear strength test (short beam) of CFs/polypropylene composites demonstrated a greater shear resistance of the composites made with CFs treated by DBD than the one with untreated fibers. Both the increase in surface roughness and the surface oxidation contribute for the enhancement of CF adhesion properties. © 2012 IEEE.

Mexico: total productivity changes at the principal container ports

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Productivity differences in Brazilian manufacturing firms, by industrial sector: school bullying and academic achievement

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