Associação entre polimorfismos em enzimas de reparo de DNA e ocorrência de meningite bacteriana.

Despite advances in vaccine development and therapy, bacterial meningitis (BM) remains a major cause of death and long-term neurological disabilities. As part of the host inflammatory response to the invading pathogen, factors such as reactive oxygen species are generated, which may damage DNA and trigger the overactivation of DNA repair mechanisms. It is conceivable that the individual susceptibility and outcome of BM may be in part determined by non synonymous polymorphisms that may alter the function of crucial BER DNA repair enzymes as PARP-1, OGG-1 and APE-1. These enzymes, in addition to their important DNA repair function, also perform role of inflammatory regulators. In this work was investigated the non synonymous SNPs APE-1 Asn148Glu, OGG-1 Ser326Cys,PARP-1 Val762Ala, PARP-1 Pro882Leu and PARP-1 Cys908Tyr in patients with bacterial meningitis (BM), chronic meningitis (CM), aseptic meningitis (AM) and not infected (controls). As results we found increased frequency of variant alleles of PARP-1 Val762Ala (P = 0.005) and APE-1 Asn148Glu (P=0.018) in BM patients, APE-1 Asn148Glu in AM patients (P = 0.012) and decrease in the frequency of the variant allele OGG-1 Ser326Cys in patients with CM (P = 0.013), regarding the allelic frequencies in the controls. A major incidence of individuals heterozygous and/ or polymorphic homozygous in BM for PARP-1 Val762Ala (P= 0.0399, OD 4.2, 95% IC 1.213 -14.545) and PARP-1 Val762Ala/ APE-1 Asn148Glu (P = 0.0238, OD 11.111, 95% IC 1.274 - 96.914) was observed related to what was expected in a not infected population. It was also observed a major incidence of combined SNPs in the BM patients compared with the control group (P=0.0281), giving evidences that SNPs can cause some susceptibility to the disease. This combined effect of SNPs seems to regulate the principal cytokines and other factors related to BM inflammatory response and point the importance of DNA repair not only to repair activity when DNA is damaged, but to others essential functions to human organism balance.

Floração precoce em cana-de-açúcar - um estudo utilizando ferramentas de análise in silico e proteômica

Sugarcane is one of the most important products of the world and Brazil is responsible for 25 % of the world production. One problem of this culture at northeast of Brazil is the early flowering. In our laboratory, it has been made before four subtractive libraries using early and late flowering genotypes in order to identify messages related to the flowering process. In this work, two cDNAs were chosen to make in silico analysis and overexpression constructs. Another approach to understand the flowering process in sugarcane was to use proteomic tools. First, the protocol for protein extraction using apical meristem was set up. After that, these proteins were separated on two bidimensional gels. It was possible to observe some difference for some regions of these gels as well as some proteins that can be found in all conditions. The next step, spots will be isolated and sequence on MS spectrometry in order to understand this physiological process in sugarcane

Prospecção e caracterização de genes associados ao processo de indução floral em cana-de-açúcar

The northeastern region is responsible to 14.32% of sugarcane national production. This lowered contribution is due to edaphoclimatic condition. Flowering is a vital process to plant which consumes lots of energy and it culminates in a process called isoporization. This one can give in a decreasing of 60% on alcohol and water production. It may consider that cropped sugarcane has a hibrid with octaploid genome, there are varieties with a flowering standard until of non flowering. Using this natural genetic potential on different croppings of sugarcane, the aim of this work was to understand as this process occurs by the usage of subtractive approaches. The total RNA was extracted using Trizol of peaks of merisematics of croppings with induced flowering and other with late flowering. From this total RNA were built four subtractives libraries (B1- induced early flowering subtracted on late flowering not induced; B2- late flowering not induced subtracted induced early flowering; B3- induced early flowering subtracted of not induced early flowering; B02- not induced early flowering subtracted from induced early flowering) using kits Super Smart cDNA synthesis and BD Clontech kit select cDNA subtraction (Clontech). This material was clone don vector pGEM T-easy(Promega) and changed in competent cells of E.coli DH10B. Given analysis sequence was carried out a program BLASTn against database of NCBI and genome of Arabidopsis thaliana, rice and maize. Clones were grouped in 9 different classes according to function. Some factors already related as couples of flower induction were identified at different libraries. And grouped proteins with cell cycle and it controls were presents, mainly kinases proteins. Related factors to proteic sinthesis, metabolism, defence, cell communication were also given in both libraries .Some identified genes did not show similarity on database or homology with hypothesis function, and it can represents new genes to be deposited in international database. These results offers that some identified on sugarcane, classified as on factors classes, cell cycle and cell communication, trough unknown genes, can be linked with genetic changing to the flowering process found in the northeastern region

Avaliação energética da produção de etanol utilizando como matéria-prima a cana-de-açúcar

This research analyzed the energetic consumption of the etanol, using as raw-material sugar cane. The searches were carried out from the field in the Midle Paranapanema River Region, São Paulo state, in the period from January to December 2007. The referring energy consumption from the crop production phase and industrial processing were evaluated. It was verified that the total energetic cost of the crop production corresponded to 14370.9MJ ha(-1), and the most onerous item was the inputs (50.4%). In the industrial step, the energetic consumption was equivalent to 1,641.56MJ t(-1), The 'hydrolysis, saccharification and broth treatment operations' represented 71.72% of the total energetic expenditure. It was also observed an energetic cost of 2.0MJ L(-1) in relation to the etanol produced in the main crop production operations, and 19.4MJ L(-1) in the industrial processing. The energy efficiency observed in the crop production and industrialization were of 1.1.

Modelagem matemática para o aproveitamento da biomassa residual de colheita da cana-de-açúcar com menor custo

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

Efeito de diferentes níveis de bicarbonato de sódio em dietas com bagaço de cana-de-açúcar auto-hidrolisado sobre a degradação in situ do milho e farelo de algodão

The objective of this work was to evaluate the buffering effect of sodium bicarbonate (NaHCO3), used in the levels of: 0, 0.7, 1.4 and 2.1% of dry matter, on the in situ degradation of corn and cottonseed meal. A diet with 60% autohidrolised sugar bagasse (BAH) and 40% of concentrate was used, plus urea, minerals and limestone. The rations was calculated to allow 300g of daily gain. After 20 days of adaptation to the treatment (levels of NaHCO3), 5g of each feed was incubated in the rumen of four bovines for 3, 6, 12, 24 and 48 hours, using naylon bag with size of 7,5 x 17,5 cm with pores of 36 micras. A randomized blocks design with four treatment (levels of NaHCO3) were used. The buffer affected the in situ dry matter degradation, whose means were 49.68; 63,10; 67,71; and 60,85% and 25.89; 30.88; 33.48 and; 31.02% for the corn and cottonseed meal, respectively. The level of 1.4% of NaHCO3 provided the highest value of degradability, which did not differ from the 0.7% and 2.1% levels, for the corn. The degradability of protein was not affected by the treatments.

Fontes e doses de manganês no acúmulo de nutrientes na palhada em cana-de-açúcar

The sugar cane crop uptake high amount of nutrients from the soil and the lack of these elements can result in low productivity of this crop. This study aimed to evaluate the effect of sources and doses of manganese on the accumulation of macro-and micronutrients of straw and stalk yield in the sugar cane crop. The experiment was conducted at Fujimoto farm, area administered by the Vale do Parana SA Alcohol and Sugar located in Suzanapolis - SP county. The experimental design was randomized blocks in a factorial scheme 5x3, with five levels of manganese and three sources, applied at planting, in four replications. The plots consisted of four rows 5 m long, spaced by 1.5 m. The variety used was RB 86-7515. The variables analyzed in the sugar cane plant and sugar cane ratoon cane were: accumulation of macro-and micronutrients, dry weight of straw and crop yield. The sources Mn influenced the accumulation of N, P and K in the straw cane plant and ratoon sugar cane in the accumulation of K, Ca, S, B, Mn and Zn. The increasing levels of Mn increased the cumulative amount of Ca, Mg, S and Mn in the cane plant and stubble of Ca, Fe and Mn in sugar cane ratoon. The sources of Mn did not influence the dry matter yields of straw and stalk, so as to plant cane to first sugar cane ratoon. The levels of Mn influenced linearly the dry straw on cane plant. As for the stem yield of sugarcane plant and sugar cane ratoon was not influenced by the levels of Mn.

Amostragem do solo em área com cana-de-açúcar após aplicação de corretivos

Este trabalho objetivou avaliar o efeito de dois métodos de amostragem nas propriedades químicas do solo, em área com cana-de-açúcar após tratamentos corretivos de acidez. O primeiro método consistiu na amostragem de solo em 30% dos pontos na posição da linha e 70% na posição da entrelinha (LE). No segundo método, as amostras de solo foram coletadas em 100% dos pontos na posição da entrelinha (E) e da combinação de duas fontes de corretivos, escória e calcário, com níveis de correção do V% para 50, para 75 e para 100, e uma testemunha sem correção. A amostragem do solo pelo método LE superestimou a acidez potencial, enquanto a amostragem do solo na entrelinha apresentou melhor ajuste dos dados para determinação do pH, H + Al, Ca, Mg e V% do solo.

Efeito da escória de siderurgia e calcário na disponibilidade de fósforo de um Latossolo Vermelho-Amarelo cultivado com cana-de-açúcar

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

Efeito residual da escória de siderurgia como corretivo de acidez do solo na soqueira de cana-de-açúcar

A escória de siderurgia, como material corretivo e efeito residual prolongado, pode beneficiar culturas de ciclo longo, a exemplo da cana-de-açúcar, minimizando a queda de produção ao longo do ciclo produtivo. Este trabalho objetivou avaliar diferentes níveis de saturação por bases, utilizando, como corretivo do solo, a escória de siderurgia, comparando-a com calcário calcítico, nas alterações de alguns atributos químicos do solo, bem como na resposta da soqueira da cana-de-açúcar. Para isto, realizou-se um experimento com a variedade SP 80-1842, durante o terceiro e o quarto corte, nos anos agrícolas 2000/01 e 2001/02. Os tratamentos, dispostos em blocos casualizados, em esquema fatorial com quatro repetições, constaram de duas fontes de corretivos, calcário calcítico e escória de siderurgia, e quatro níveis de correção, estimados pelo método da saturação por bases (V %): testemunha (sem correção) e com correção para V % de 50; 75 e 100, tendo sido tais corretivos aplicados na época do plantio da cana-de-açúcar. O calcário calcítico e a escória de siderurgia promoveram efeito residual benéfico, após 48 meses da aplicação, na correção da acidez do solo e na elevação do valor da saturação por bases; a maior dose de calcário causou efeito depressivo no perfilhamento, no número de colmos industrializáveis e na produção da cana-de-açúcar, fato não observado com uso da escória de siderurgia; a aplicação da escória de siderurgia e do calcário, em pré-plantio, promoveu efeito residual positivo na produção da soqueira de cana-de-açúcar.

Produtividade e valor nutricional de variedades de cana-de-açúcar sob diferentes fontes de fósforo

Due to the expansion of sugarcane in areas that are not traditional in it's cultivation, there is need of study the management of fertilizer, mainly phosphorus, since it's the nutrient that most limits the production in the tropics. The aim of this work was to evaluate the productivity and nutritional value of two varieties of sugarcane grown under different phosphorus sources, for three production cycles in North of Mato Grosso State, Brazil. The experimental design was randomized blocks in factorial scheme 4x2, with four replications. The sources of phosphorus used were bone meal, Arad phosphate and triple superphosphate at a dose of 100 kg P2O5 ha(-1), and a control without nutrient application at planting. The varieties of sugarcane were planted IAC86-2480 and SP79-1011. We evaluated the productivity of dry matter, dry matter content, neutral detergent fiber and acid detergent, lignin, cellulose, in vitro digestibility and crude protein of forage. The phosphorus sources provided higher yields during the first cycle of sugarcane and did not cause significant effect on productivity in subsequent cycles. Phosphorus fertilization did not cause significant changes in the nutritional value of sugarcane. The variety IAC86-2480 showed higher crude protein content in three cycles and higher dry matter yield in the first two cycles, compared to SP79-1011. Regarding the fiber constituents, both showed similar results.

Efeito de lodo de esgoto na fertilidade de um Argissolo Vermelho-Amarelo cultivado com cana-de-açúcar

O objetivo deste trabalho foi avaliar os efeitos da aplicação de 0, 20 e 40 Mg ha-1 de lodo de esgoto, na presença e ausência de fertilizante mineral (NPK) na fertilidade e nos teores de metais pesados de um Argissolo Vermelho-Amarelo distrófico, cultivado com cana-de-açúcar. Amostras de solo foram coletadas aos 146, 272 e 484 dias após o plantio da cultura de cana-de-açúcar e foram submetidas à análise de fertilidade pelo método do Instituto Agronômico de Campinas, incluindo a determinação do S, Cr, Cd, Cu, Fe, Mn, Pb e Zn. O lodo de esgoto diminuiu a acidez do solo e forneceu Ca, P, S e Zn, principalmente. Seus efeitos foram de curta duração, restringindo-se a um ano agrícola. Os teores dos metais pesados das amostras de solo tratado foram maiores que os da testemunha, mas menores que os valores considerados perigosos ao ambiente.

Caracterização de um isolado do Sugarcane mosaic virus que quebra a resistência de variedades comerciais de cana-de-açúcar

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

Atividade das enzimas invertases e acúmulo de sacarose em cana-de-açúcar sob efeito do nitrato de potássio, etefon e etil-trinexapac

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

Influência de variedades de cana-de-açúcar, incorporadas em dieta artificial, no desenvolvimento de Diatraea saccharalis (Fabr.) e no seu parasitismo por Cotesia flavipes (Cam.)

Verificou-se a influência de duas variedades de cana-de-açúcar (Saccharum spp.), incorparados em dieta artificial, na forma de colmos triturados, no desenvolvimento de Diatraea saccharalis (Fabr.) e no parasitismo de Cotesia flavipes (Cam.). A variedade SP71-1081 foi menos adequada ao desenvolvimento de D. saccharalis comparada à SP71-3146, aumentando os períodos larval e pupal (dias) e, diminuindo o peso larval; não houve diferenças para as viabilidades larval e pupal e peso de pupa. Lagartas oriundas das dietas artificiais e lagartas alojadas no interior dos toletes das variedades de cana, foram igualmente parasitadas por C. flavipes. Lagartas criadas em dieta artificial contendo colmos triturados das variedades testadas, promoveram desenvolvimento semelhante de C. flavipes. A percentagem de parasitismo foi semelhante nas larvas criadas em dietas artificiais contendo colmos das variedades SP 71 - 1081 (84,0%) e SP 71-3146 (81,3%).