MarA-mediated transcriptional repression of the rob promoter

The Escherichia coli transcriptional regulator MarA affects functions that include antibiotic resistance, persistence, and survival. MarA functions as an activator or repressor of transcription utilizing similar degenerate DNA sequences (marboxes) with three different binding site configurations with respect to the RNA polymerase-binding sites. We demonstrate that MarA down-regulates rob transcripts both in vivo and in vitro via a MarA-binding site within the rob promoter that is positioned between the -10 and -35 hexamers. As for the hdeA and purA promoters, which are repressed by MarA, the rob marbox is also in the "backward" orientation. Protein-DNA interactions show that SoxS and Rob, like MarA, bind the same marbox in the rob promoter. Electrophoretic mobility shift analyses with a MarA-specific antibody demonstrate that MarA and RNA polymerase form a ternary complex with the rob promoter DNA. Transcription experiments in vitro and potassium permanganate footprinting analysis show that MarA affects the RNA polymerase-mediated closed to open complex formation at the rob promoter.

Donepezil and memantine for moderate-to-severe Alzheimer's disease

Background: Clinical trials have shown the benefits of cholinesterase inhibitors for the treatment of mild-to-moderate Alzheimer's disease. It is not known whether treatment benefits continue after the progression to moderate-to-severe disease. Methods: We assigned 295 community-dwelling patients who had been treated with donepezil for at least 3 months and who had moderate or severe Alzheimer's disease (a score of 5 to 13 on the Standardized Mini-Mental State Examination [SMMSE, on which scores range from 0 to 30, with higher scores indicating better cognitive function]) to continue donepezil, discontinue donepezil, discontinue donepezil and start memantine, or continue donepezil and start memantine. Patients received the study treatment for 52 weeks. The coprimary outcomes were scores on the SMMSE and on the Bristol Activities of Daily Living Scale (BADLS, on which scores range from 0 to 60, with higher scores indicating greater impairment). The minimum clinically important differences were 1.4 points on the SMMSE and 3.5 points on the BADLS.
Results: Patients assigned to continue donepezil, as compared with those assigned to discontinue donepezil, had a score on the SMMSE that was higher by an average of 1.9 points (95% confidence interval [CI], 1.3 to 2.5) and a score on the BADLS that was lower (indicating less impairment) by 3.0 points (95% CI, 1.8 to 4.3) (P<0.001 for both comparisons). Patients assigned to receive memantine, as compared with those assigned to receive memantine placebo, had a score on the SMMSE that was an average of 1.2 points higher (95% CI, 0.6 to 1.8; P<0.001) and a score on the BADLS that was 1.5 points lower (95% CI, 0.3 to 2.8; P = 0.02). The efficacy of donepezil and of memantine did not differ significantly in the presence or absence of the other. There were no significant benefits of the combination of donepezil and memantine over donepezil alone.
Conclusions: In patients with moderate or severe Alzheimer's disease, continued treatment with donepezil was associated with cognitive benefits that exceeded the minimum clinically important difference and with significant functional benefits over the course of 12 months. (Funded by the U.K. Medical Research Council and the U.K. Alzheimer's Society; Current Controlled Trials number, ISRCTN49545035).

Determining the minimum clinically important differences for outcomes in the DOMINO trial

Although less likely to be reported in clinical trials than expressions of the statistical significance of differences in outcomes, whether or not a treatment has delivered a specified minimum clinically important difference (MCID) is also relevant to patients and their caregivers and doctors. Many dementia treatment randomised controlled trials (RCTs) have not reported MCIDs and, where they have been done, observed differences have not reached these.

DOMINO-AD protocol:donepezil and memantine in moderate to severe Alzheimer's disease - a multicentre RCT

Alzheimer's disease (AD) is the commonest cause of dementia. Cholinesterase inhibitors, such as donepezil, are the drug class with the best evidence of efficacy, licensed for mild to moderate AD, while the glutamate antagonist memantine has been widely prescribed, often in the later stages of AD. Memantine is licensed for moderate to severe dementia in AD but is not recommended by the England and Wales National Institute for Health and Clinical Excellence. However, there is little evidence to guide clinicians as to what to prescribe as AD advances; in particular, what to do as the condition progresses from moderate to severe. Options include continuing cholinesterase inhibitors irrespective of decline, adding memantine to cholinesterase inhibitors, or prescribing memantine instead of cholinesterase inhibitors. The aim of this trial is to establish the most effective drug option for people with AD who are progressing from moderate to severe dementia despite treatment with donepezil.

Programmable motion and separation of single magnetic particles on patterned magnetic surfaces

Motion of single micrometer-sized magnetic particles on patterned magnetic surfaces is controlled by a rotating magnetic field (see Figure and cover). Patterns of thin-film magnetic elements are tailored to form transport lines. Individual particles are separated by adding junctions to the transport lines. The method can improve existing applications in biotechnology and generate new ones in life sciences.

The Joy and Roy of Irish

A short play as part of theatre company Kabosh's walking-tour-with-performances 'The West Awakes', focusing on aspects of the history and culture of West Belfast. My piece dramatised the contribution of Belfast Protestants and Unionists to the Irish language.

Introducing the CTA concept

The Cherenkov Telescope Array (CTA) is a new observatory for very high-energy (VHE) gamma rays. CTA has ambitions science goals, for which it is necessary to achieve full-sky coverage, to improve the sensitivity by about an order of magnitude, to span about four decades of energy, from a few tens of GeV to above 100 TeV with enhanced angular and energy resolutions over existing VHE gamma-ray observatories. An international collaboration has formed with more than 1000 members from 27 countries in Europe, Asia, Africa and North and South America. In 2010 the CTA Consortium completed a Design Study and started a three-year Preparatory Phase which leads to production readiness of CTA in 2014. In this paper we introduce the science goals and the concept of CTA, and provide an overview of the project. © 2013 Elsevier B.V. All rights reserved.

Comunicação humano-robô através de linguagem falada

Nos últimos anos, as tecnologias que dão suporte à robótica avançaram expressivamente. É possível encontrar robôs de serviço nos mais variados campos. O próximo passo é o desenvolvimento de robôs inteligentes, com capacidade de comunicação em linguagem falada e de realizar trabalhos úteis em interação/cooperação com humanos. Torna-se necessário, então, encontrar um modo de interagir eficientemente com esses robôs, e com agentes inteligentes de maneira geral, que permita a transmissão de conhecimento em ambos os sentidos. Partiremos da hipótese de que é possível desenvolver um sistema de diálogo baseado em linguagem natural falada que resolva esse problema. Assim, o objetivo principal deste trabalho é a definição, implementação e avaliação de um sistema de diálogo utilizável na interação baseada em linguagem natural falada entre humanos e agentes inteligentes. Ao longo deste texto, mostraremos os principais aspectos da comunicação por linguagem falada, tanto entre os humanos, como também entre humanos e máquinas. Apresentaremos as principais categorias de sistemas de diálogo, com exemplos de alguns sistemas implementados, assim como ferramentas para desenvolvimento e algumas técnicas de avaliação. A seguir, entre outros aspectos, desenvolveremos os seguintes: a evolução levada a efeito na arquitetura computacional do Carl, robô utilizado neste trabalho; o módulo de aquisição e gestão de conhecimento, desenvolvido para dar suporte à interação; e o novo gestor de diálogo, baseado na abordagem de “Estado da Informação”, também concebido e implementado no âmbito desta tese. Por fim, uma avaliação experimental envolvendo a realização de diversas tarefas de interação com vários participantes voluntários demonstrou ser possível interagir com o robô e realizar as tarefas solicitadas. Este trabalho experimental incluiu avaliação parcial de funcionalidades, avaliação global do sistema de diálogo e avaliação de usabilidade.

Visão activa para robô cognitivo

Dissertação de mest., Engenharia Eléctrica e Electrónica (Tecnologias de Informação e Telecomunicações), Instituto Superior de Engenharia, Univ. do Algarve, 2011

Comparisons of Fungal Spore Distributions Using Air Sampling at Worcester, England (2006-2010)

This study determined annual and monthly fluctuations in concentration of 20 fungal genera. The selection of taxa was made based upon their high frequency in the air as well as their well-known allergenic properties. Air samples were collected using a spore trap of Hirst design at an urban site where the trap continuously worked throughout a 5-year survey. Weather data were acquired from a meteorological station co-located with the air sampler. Influence of several meteorological parameters was then examined to reveal species–environment interactions and the potential location of fungal spore sources within the urban area. The maximum monthly sum of mean daily spore concentration varied between genera, and the earliest peaks were recorded for Pleospora sp. in April and Ustilago sp. in June. However, the majority of investigated spore types occurred in the greatest concentrations between August and September. Out of the 20 studied taxa, the most dominant genus was Cladosporium sp., which exceeded an allergenic threshold of 3000 s m-3 40 times during very rainy years and twice as much during dry years. A Spearman’s rank test showed that statistically significant (p B 0.05) relationships between spore concentration and weather parameters were mainly rs B 0.50. Potential sources of spores at Worcester were likely to be localised outside the city area.

Contribuição para o estudo do"breve aparelho e modo facil pera ajudar a bem morrer hum christão" (1671)

Polissema: Revista de Letras do ISCAP 2002/N.º 2 Linguagens

Resumo de: Portugal ilustrado pelo sexo feminino de Diogo Aires de Azevedo (Lisboa, 1734), tradição do género

O presente artigo tem por alvo a apresentação do estudo da tradição do género da obra de Diogo Manuel Aires de Azevedo, intitulada Portugal ilustrado pelo sexo feminino, notícia histórica de muitas heroínas portuguesas que floreceram em virtude, letras e armas, publicada em Lisboa, em 1734. O tema abordado por Diogo Azevedo – descrição de inúmeras ―vidas‖ de mulheres portuguesas que se destacaram pelas suas acções notáveis – permite-nos aferir da intenção didáctica e moralizadora da obra e, como tal, inseri-la na longa tradição das biografias femininas, associadas ao relato hagiográfico. A grande divulgação deste género é iniciada por Boccaccio em De mulieribus claris e tem continuidade numa plêiade de autores nacionais e internacionais, tais como Juan Perez de Moya, Frei Luís dos Anjos, Damião de Froes Perym e tantos outros. Propomo-nos apresentar um estudo cujos objectivos se prendem com o desejo de despertar o interesse de um vasto público, especializado ou não, pela leitura de uma obra do séc. XVIII, que pela sua especificidade se reveste de grande interesse literário, histórico e cultural.