Gene structure of goose-type lysozyme in the mandarin fish Siniperca chuatsi with analysis on the lytic activity of its recombinant in Escherichia coli

A goose-type lysozyme (g-lysozyme) gene has been cloned from the mandarin fish (Siniperca chuatsi), with its recombinant protein expressed in Escherichia coli. From the first transcription initiation site, the mandarin fish g-lysozyme gene extends 1307 nucleotides to the end of the 3' untranslated region, and it contains 5 exons and 4 introns. The open reading frame of the glysozyme transcript has 582 nucleotides which encode a 194 amino acid peptide. The 5' flanking region of mandarin fish glysozyme gene shows several common transcriptional factor binding sites when compared with that from Japanese flounder (Paralichthys olivaceus). The recombinant mandarin fish g-lysozyme was expressed in E. coli by using pET-32a vector, and the purified recombinant g-lysozyme shows lytic activity against Micrococcus lysodeikticus. (c) 2005 Elsevier B.V All rights reserved.

Complete genome sequence of lymphocystis disease virus isolated from China

Lymphocystis diseases in fish throughout the world have been extensively described. Here we report the complete genome sequence of lymphocystis disease virus isolated in China (LCDV-C), an LCDV isolated from cultured flounder (Paralichthys olivaceus) with lymphocystis disease in China. The LCDV-C genome is 186,250 bp, with a base composition of 27.25% G+C. Computer-assisted analysis revealed 240 potential open reading frames (ORFs) and 176 nonoverlapping putative viral genes, which encode polypeptides ranging from 40 to 1,193 amino acids. The percent coding density is 67%, and the average length of each ORF is 702 bp. A search of the GenBank database using the 176 individual putative genes revealed 103 homologues to the corresponding ORFs of LCDV-1 and 73 potential genes that were not found in LCDV-1 and other iridoviruses. Among the 73 genes, there are 8 genes that contain conserved domains of cellular genes and 65 novel genes that do not show any significant homology with the sequences in public databases. Although a certain extent of similarity between putative gene products of LCDV-C and corresponding proteins of LCDV-1 was revealed, no colinearity was detected when their ORF arrangements and coding strategies were compared to each other, suggesting that a high degree of genetic rearrangements between them has occurred. And a large number of tandem and overlapping repeated sequences were observed in the LCDV-C genome. The deduced amino acid sequence of the major capsid protein (MCP) presents the highest identity to those of LCDV-1 and other iridoviruses among the LCDV-C gene products. Furthermore, a phylogenetic tree was constructed based on the multiple alignments of nine MCP amino acid sequences. Interestingly, LCDV-C and LCDV-1 were clustered together, but their amino acid identity is much less than that in other clusters. The unexpected levels of divergence between their genomes in size, gene organization, and gene product identity suggest that LCDV-C and LCDV-1 shouldn't belong to a same species and that LCDV-C should be considered a species different from LCDV-1.

The vertical microdistribution of cyanobacteria and green algae within desert crusts and the development of the algal crusts

Substantial amounts of algal crusts were collected from five different desert experimental sites aged 42, 34, 17, 8 and 4 years, respectively, at Shapotou ( China) and analyzed at a 0.1 mm microscale of depth. It was found that the vertical distribution of cyanobacteria and microalgae in the crusts was distinctly laminated into an inorganic-layer (ca. 0.00 - 0.02 mm, with few algae), an algae-dense-layer ( ca. 0.02 - 1.0 mm) and an algae-sparse-layer ( ca. 1.0 - 5.0 mm). It was interesting to note that in all crusts Scytonema javanicum Born et Flah ( or Nostoc sp., cyanobacterium), Desmococcus olivaceus (Pers ex Ach., green alga) Laundon and Microcoleus vaginatus Gom. ( cyanobacterium) dominated at the depth of 0.02 - 0.05, 0.05 - 0.1 and 0.1 - 1.0 mm, respectively, from the surface. Phormidium tenue Gom. ( or Lyngbya cryptovaginatus Schk., cyanobacterium) and Navicula cryptocephala Kutz.( or Hantzschia amphioxys (Ehr.) Grun. and N. cryptocephala together, diatom) dominated at the depth of 1.0 - 3.0 and 3.5 - 4.0 mm, respectively, of the crusts from the 42 and 34 year old sites. It was apparent that in more developed crusts there were more green algae and the niches of Nostoc sp., Chlorella vulgaris Beij., M. vaginatus, N. cryptocephala and fungi were nearer to the surface. If lichens and mosses accounted for less than 41.5% of the crust surface, algal biovolume was bigger when the crust was older, but the opposite was true when the cryptogams other than algae covered more than 70%. In addition to detailed species composition and biovolume, analyses of soil physicochemical properties, micromorphologies and mineral components were also performed. It was found that the concentration of organic matter and nutrients, electric conductivity, silt, clay, secondary minerals were higher and there were more micro-beddings in the older crusts than the less developed ones. Possible mechanisms for the algal vertical microdistribtion at different stages and the impact of soil topography on crust development are discussed. It is concluded that biomethods ( such as fine species distribution and biovolume) were more precise than mineralogical approaches in judging algal crust development and thus could be a better means to measure the potentiality of algal crusts in desert amelioration.

A physico-chemical comparative study on extracellular carbohydrate polymers from five desert algae

Hydrodynamic properties of five newly isolated algal extracellular polysaccharides with putative adhesive properties are described, using a combination of size exclusion chromatography, total or 'multi-angle' laser light scattering and analytical ultracentrifugation. The respective polysaccharides had been extracted from four filamentous cyanobacteria: Microcoleus vaginatus, Scytonema javanicum, Phormidium tenue and Nostoc sp. and a coccoid single-cell green. algae Desmococcus olivaceus that had been separated from desert algal crusts of the Chinese Tegger Desert. SEC/MALLS experiments showed that the saccharides had, diverse-weight average molecular weights ranging from 4000 to 250,000 g/mol and all five showed either bi-modal or tri-modal molecular weight distribution profiles. Use of the Mark-Houwink-Kuhn-Sakurada (MHKS) scaling relationship between sedimentation coefficient and (weight average) molecular weight for the five samples, assuming a homologous conformation series revealed an MHKS b exponent of (0.33 +/- 0.04), suggesting a conformation between that of a stiff rod (b similar to 0.18) and a random coil (b similar to 0.4-0.5), i.e. a 'flexible rod' or 'stiff coil'. (C) 2003 Elsevier Ltd. All rights reserved.

Extracellular carbohydrate polymers from five desert soil algae with different cohesion in the stabilization of fine sand grain

Extracellular polymeric substances (EPS) from four filamentous cyanobacteria Microcoleus vaginatus, Scytonema javanicum, Phormidium tenue and Nostoc sp. and a coccoid single-cell green alga Desmococcus olivaceus that had been separated from desert algal crusts of Tegger desert of China, were investigated for their chemical composition, structure,and physical properties. The EPS contained 7.5-50.3% protein (in polymers ranging from 14 to more than 200 kD, SDS-PAGE) and 16.2-46.5% carbohydrate (110-460 kD, GFC). 6-12 kinds of monosaccharides, including 2-O-methyl rhamnose, 2-O-methyl glucose, and N-acetyl glucosamine were found. The main carbohydrate chains from M. vaginatus and S. javanicum consisted mainly of equal proportion of Man, Gal and Glc, that from P. tenue consisted mainly of arabinose, glucose and rhamnose. Arabinose was present in pyranose form, mainly alpha-L 1 --> 3 linked, with branches on C4 of almost half of the units. Glucose was responsible for the terminal units, in addition of having some units as beta1 --> 3 and some as beta1 --> 4 linked. Rhamnose was mainly 1 --> 3 linked with branches on C2 on half of the units. The carbohydrate polymer from D. olivaceus was composed mainly of beta1 --> 4 linked xylose, galactose and glucose. The galactose part was present both in beta-pyranose and -furanose forms. Arabinose in alpha-L-furanose form was mainly present as 1 --> 2 and 1 --> 2, 5 linked units, rhamnose only as alpha 1 --> 3 and xylose as beta 1 --> 4. The backbone of the polysaccharide from Nostoc sp. was composed of beta-1 --> 4 linked xylose, galactose and glucose. Most of the glucose was branched on position C6, terminal glucose and 2-O-methyl glucose units are also present. The relationship between structure, physical properties and potential biological function is discussed. (C) 2003 Elsevier Ltd. All rights reserved.

Effect of desert soil algae on the stabilization of fine sands

Four filamentous cyanobacteria, Microcoleus vaginatus, Phormidium tenue, Scytonema javanicum (Kutz.) and Nostoc sp., and a single-celled green alga, Desmococcus olivaceus, all isolated from Shapotou (Ningxia Hui Autonomous Region of China), were batch cultured and inoculated onto unconsolidated sand in greenhouse and field experiments. Their ability to reduce wind erosion in sands was quantified by using a wind tunnel laboratory. The major factors related to cohesion of algal crusts, such as biomass, species, species combinations, bioactivity, niche, growth phase of algae, moisture, thickness of the crusts, dust accretion (including dust content and manner of dust added) and other cryptogams (lichens, fungi and mosses) were studied. The best of the five species were M. vaginatus and P. tenue, while the best mix was a blend of 80% M. vaginatus and 5% each of P. tenue, S. javanicum, Nostoc sp. and D. olivaceus. The threshold friction velocity was significantly increased by the presence of all of the cyanobacterial species, while the threshold impact velocity was notably increased only by the filamentous species. Thick crusts were less easily eroded than thin crusts, while biomass was more effective than thickness. Dust was incorporated best into Microcoleus crust when added in small amounts over time, and appeared to increase growth of the cyanobacterium as well as strengthen the cohesion of the crust. Microbial crust cohesion was mainly attributed to algal aggregation, while lichens, fungi and mosses affected more the soil structure and physico-chemical properties.

Identification of an Edwardsiella tarda surface antigen and analysis of its immunoprotective potential as a purified recombinant subunit vaccine and a surface-anchored subunit vaccine expressed by a fish commensal strain

Edwardsiella tarda is the etiological agent of edwardsiellosis, a systematic disease that affects a wide range of marine and freshwater fish cultured worldwide. In order to identify E. tarda antigens with vaccine potential, we in this study conducted a systematic search for E. tarda proteins with secretion capacity. One of the proteins thus identified was Esa1, which contains 795 amino acid residues and shares extensive overall sequence identities with the D15-like surface antigens of several bacterial species. In silico analyses indicated that Esa1 localizes to outer membrane and possesses domain structures that are conserved among bacterial surface antigens. The vaccine potential of purified recombinant Esa1 was examined in a Japanese flounder (Paralichthys olivaceus) model, which showed that fish vaccinated with Esa1 exhibited a high level of survival and produced specific serum antibodies. Passive immunization of naive fish with antisera raised against Esa1 resulted in significant protection against E. tarda challenge. Taking advantage of the secretion capacity of Esa1 and the natural gut-colonization ability of a fish commensal strain, we constructed an Esa1-expressing recombinant strain, FP3/pJsa1. Western immunoblot and agglutination analyses showed that FP3/pJsa1 produces outer membrane-localized Esa1 and forms aggregates in the presence of anti-Esa1 antibodies. Vaccination analyses showed that FP3/pJsa1 as an intraperitoneal injection vaccine and an oral vaccine embedded in alginate microspheres produced relative percent survival rates of 79% and 52%, respectively, under severe challenging conditions that resulted in 92-96% mortality in control fish. Further analyses showed that following oral vaccination, FP3/pJsa1 was able to colonize in the gut but unable to disseminate into other tissues. Together these results indicate that Esa1 is a protective immunogen and an effective oral vaccine when delivered by FP3/pJsa1 as a surface-anchored antigen. (c) 2010 Elsevier Ltd. All rights reserved.

Isolation and analysis of the vaccine potential of an attenuated Edwardsiella tarda strain

Edwardsiella tarda is an important aquaculture pathogen that can infect a wide range of marine and freshwater fish worldwide. In this study, a modified E. tarda strain, TX5RM, was selected by multiple passages of the pathogenic E. tarda strain TX5 on growth medium containing the antibiotic rifampicin. Compared to the wild type strain, the rifampicin-resistant mutant TX5RM (i) shows drastically increased median lethal dose and reduced capacity to disseminate in and colonize fish tissues and blood; (ii) exhibits slower growth rates when cultured in rich medium or under conditions of iron depletion; and (iii) differs in the production profile of whole-cell proteins. The immunoprotective potential of TX5RM was examined in a Japanese flounder (Paralichthys olivaceus) model as a vaccine delivered via intraperitoneal injection, oral feeding, bath immersion, and oral feeding plus immersion. All the vaccination trials, except those of injection, were performed with a booster at 3-week after the first vaccination. The results showed that TX5RM administered via all four approaches produced significant protection, with the highest protection levels observed with TX5RM administered via oral feeding plus immersion, which were, in terms of relative percent of survival (RPS), 80.6% and 69.4% at 5- and 8-week post-vaccination, respectively. Comparable levels of specific serum antibody production were induced by TX5RM-vaccinated via different routes. Microbiological analyses showed that TX5RM was recovered from the gut, liver, and spleen of the fish at 1-10 days post-oral vaccination and from the spleen, liver, kidney, and blood of the fish at 1-14 days post-immersion vaccination. Taken together, these results indicate that TX5RM is an attenuated E. tarda strain with good vaccine potential and that a combination of oral and immersion vaccinations may be a good choice for the administration of live attenuated vaccines. (C) 2010 Elsevier Ltd. All rights reserved.

牙鲆与大黄鱼卵黄囊期发育阶段生化与能量代谢研究

于1999年5－6月间在实验室内对暖温性底层鱼类褐牙鲆(Paralichthys olivaceus)和暖水性近底层鱼类大黄鱼(Pseudosciaena crocea)进行了自受精卵开始到早期仔鱼的发育生态学实验。褐牙鲆和大黄鱼的培育温度分别为17.4±0.3 ℃和23.2±0.3 ℃，盐度均为31±0.2‰，遮光静养。通过测定其受精卵细胞的干重、湿重、卵黄和油球体积以及细胞发育过程中的耗氧率、氨排泄率、铵离子含量、游离氨基酸、蛋白质、总脂、脂肪酸等参数的变化（大黄鱼仅限于卵黄和油球体积、耗氧率、氨排泄率、铵离子含量、游离氨基酸和蛋白质），分析不同发育阶段的生化代谢和能量代谢特征；结合已有的研究成果，比较鱼类发育能量学的基本规律。结果表明：1．在受精卵分裂和胚体发育中，褐牙鲆和大黄鱼均呈现明显的铵离子累积现象，其间产生的氨一部分排到环境中，另一部分在卵中积累，孵化时随着卵膜的破裂而排出，导致氨排泄率出现一个峰值。2．游离氨基酸是早期发育阶段的一个重要能源物质，分别构成了褐牙鲆能量代谢的35％和大黄鱼能量代谢的28％。此外，在受精卵发育阶段，游离氨基酸还被用来合成蛋白质，所以在受精卵发育阶段，蛋白质非但不减少，还会有明显的增加。3．在孵化前后，伴随着卵膜的破裂和卵周液的流失，干重和蛋白质含量均有明显的减少。4．卵黄囊期仔鱼早期阶段，蛋白质含量略有增加，这说明还有一部分的游离氨基酸被合成了蛋白质。其后，蛋白质含量呈现下降趋势，表明蛋白质也已被用做能源物质。5．褐牙鲆受精卵中最主要的多不饱和脂肪酸是DHA和EPA，二者合计占多不饱和脂肪酸总量的86％。比较油球体和总脂含量的变化特征，不难发现脂肪酸主要是位于油球中。这说明来自油球的脂类是褐牙鲆仔鱼在这个阶段的主要能源物质，来自油球的中性脂肪NL的脂肪酸FA是从孵化到开口这段时间主要的能源物质。磷脂PL的脂肪酸FA只是被很少的利用（为中性脂肪NL的30％）。6．游离氨基酸FAA是褐牙鲆与大黄鱼在受精发育阶段最重要的能源物质，而在孵化后来自油球的中性脂肪NL的脂肪酸NLFA被用做主要能源物质，蛋白质则是在开口之前就用做能源物质，但其作用还不是很大。主要能源物质的转变可以从氮熵NQ的变化看出来，氮熵呈现一种先降低后升高的态势。但就整个早期发育阶段来说，无氮的脂类所起的作用更大一些。分解的主要中性脂肪酸是那些含量最丰富的种类，而与他们的饱和度无关。7．褐牙鲆从卵受精后8小时到仔鱼开口，能够将卵黄消耗的焓的59.7％转化为生长（P），有43.6％因代谢而散失，还有极少部分0.4％因排汇而丢失。有一定的实验误差在里面。8．褐牙鲆是适温较低的暖温性底层鱼类，卵子较小，发育时水温较低，发育较慢；大黄鱼是适温较高的暖水性近底层鱼类，卵子较大，发育时水温较高，发育较快，所以褐牙鲆与大黄鱼在早期发育阶段所采取的能量对策是不一样的。褐牙鲆游离氨基酸占总的能量代谢的35％，而大黄鱼只占28％，相对而言，暖水性鱼类比暖温性鱼类更为依赖脂类，氨基酸所起的作用相对较小一些。9．依据已有研究成果，不难得出：鱼类早期发育过程中主要能源物质变化和能量代谢牲征有物种特异性。对于含一个油球的鱼类来说，基于脂肪的能量代谢是重要的；而对于不含油球的鱼类来说，氨基酸的作用更为重要一些。这些研究对于仔鱼在开口时营养成分的确定及满足、死亡率以及生活史特征具有十分重要的科学价值。

牙鲆群体遗传多样性及鲽形目鱼类分子系统学初步研究

本文以山东近海野生和养殖牙鲆Paralichthys olivaceus(T．& S.)为研究对象，采用同工酶电泳和随机扩增多态性DNA(RAPD)两种方法，进行了群体遗传学研究；另外，用PCR扩增了牙鲆、桂皮斑鲆Pseudorhombus cinnamomeus(T．& S.)、石鲽Kareius bicoloratus，Basilewsky和大菱鲆Psetta maxima 4种鲽形目鱼类mtDNA 16s rRNA基因区的部分片段，采用生物信息、学方法构建了鲽形目分子系统树。主要结果如下：1．首先建立了适于牙鲆同工酶分析的水平淀粉凝胶和垂直聚丙烯酰胺凝胶电泳系统；对获得的牙鲆15种同工酶基本酶谱进行了生化遗传分析，进而对自然和养殖群体的生化遗传结构进行了分析，共记录了29个基因座位，发现了9个多态座位。2．野生群体的生化遗传参数多态基因座位比例(31．O％)、等位基因平均数(1．38)和群体平均杂合度(0．0802)都明显高于养殖群体(24．1％，1．28，O．0788)；在野生群体中有9个多态基因座位，而养殖群体仅7个多态基因座位；其中，除了Cat和Idhp-1(仅养殖群体)(P < 0．05)有显著差异、Ldh-C(P < O．01)完全偏离Hardy-Weinberg定律外，其余多态座位基因频率均符合Hardy-Weinberg遗传平衡定律。野生和养殖群体的遗传相似性系数(I)为0．9877，它们的遗传距离(D)是0．0124；两群体间的遗传分化系数G_(st)为0．0681，D_m为0．01，表明总变异中的6．8％的遗传变异产生于群体间的基因差异。3．采用11个随机引物对20个野生个体和24个养殖个体进行了RAPD群体遗传多样性分析，分别扩增出88条和86条DNA带，片段大小在200-2500bp之间，平均每个引物扩增的带数是7．8-8．0。两个群体的多态座位比例分别是43．2％和34．9％，平均杂合度是0．2739和0．2255，而Shannon遗传多样性指数表明两群体的遗传变异中有88．12％的遗传变异来自种群内，只有11．88％的变异来自群体间。遗传分化指数G_(st)的结果也验证了Shannon遗传多样性指数的结果：总群体的遗传变异中约有12％是由两群体间的基因差异产生的。4．本文对牙鲆两个群体的同一批样品分别采用经典的同工酶方法和RAPD方法进行了较系统的比较分析。发现，RAPD所显示的多态性要比同工酶的高得多，因为大部分RAPD的变异是源于非编码区和重复DNA，可以遍布整个基因组，而同工酶仅是功能基因的产物，只表现编码区的变异。因此，自然选择在同工酶编码区的作用要多于RAPD标记。在遗传相似性系数(I)和遗传距离(D)上，RAPD的分析结果与同工酶的分析结果也是有差异的，用同工酶分析两个群体遗传距离只有0．0124，而用RAPD研究可达0．0508。遗传分化指数的差异也很大，同工酶为0．0681，RAPD为0．1237。5．RAPD和同工酶的分析结果是类似的，即自然群体的多态座位比例和平均杂合度要比养殖群体高，降低幅度在同工酶中界于1．7～22．3％之间，在RAPD中则界于15．9～19．2％之间。这充分证明了养殖群体的遗传多样性水平已有明显的丧失，值得我们注意。6．构建了鲽形目鱼类mtDNA 16S rRNA基因的分子系统树。通过分子克隆法将牙鲆、桂皮斑鲆、大菱鲆和石鲽mtDNA 16S rRNA目的基因片段连接到质粒载体上，经MegaBACE测序仪测序，分别获得了590、595、582和590bp序列，通过生物信息学方法对其进行了序列分析和核酸变异比较，结合NCBI上6种鲽形目鱼类的同源序列探讨了这4种鱼类在鲽形目中的遗传分化和分子系统进化，构建了系统树，其中，桂皮斑鲆的16S rRNA基因在系统树中的位置与物种形态资料的系统演化不相符，而其它三种很好地呈现了它们在鲽形目中的系统位置。同时，可以看出mtDNA 16S rRNA基因片段可以构建一个相对准确的树，特别是NJ树和ML树比较接近，更为客观一些。由比对序列获得的物种之间的遗传距离也基本可以反映种、属、科间的不同变异水平。

褐牙鲆和夏牙鲆杂交的遗传学研究

在进行褐牙鲆(Paralichthys olivaceus)和夏牙鲆(P. dentatus)的杂交及回交的基础上，利用染色体计数、AFLP、线粒体DNA和核基因部分序列等分析方法对褐牙鲆和夏牙鲆正反交和回交子代进行遗传学研究，探讨了褐牙鲆和夏牙鲆正反交不对称的遗传学基础及其生殖隔离现象，主要结果如下： 1. 褐牙鲆和夏牙鲆正反交的活力是不对称的，褐牙鲆♀×夏牙鲆♂的正交杂种活力正常，能够正常存活、生长和发育，而反交夏牙鲆♀×褐牙鲆♂的杂种体态畸形，孵出后不久死亡。染色体计数发现正交个体的染色体核型与父母本一致，均为48条端部着丝粒染色体；而反交杂种比亲本缺失了两条染色体，仅为46条端部着丝粒染色体，这表明反交杂种为非整倍体。进一步利用AFLP方法对遗传物质从亲本到子代的传递进行了分析，结果显示正反交遗传物质的传承方式存在很大差异。几乎所有亲本的AFLP位点(97.71%)均传递到正交子代。然而，仅有86.64%的AFLP位点从亲本传递到反交子代，反交子代中亲本位点的丢失比例显著高于正交子代和亲本种内交配子代的比例 ( P < 0.05)，这可能与反交杂种染色体丢失有关。进一步分析发现，杂交组中的偏分离标记高于对照组，尽管经2检验发现其差异并不显著 (P > 0.05)。 2. 对于可以成活的正交杂种进行培育达到性成熟后，利用褐牙鲆和夏牙鲆的精液分别与雌性杂交鲆的卵子进行母本回交实验。通过统计受精率、孵化率及杂交适合度值（CFM，受精率和孵化率相乘获得的结果）评估褐牙鲆和夏牙鲆的杂交可适度，结果表明正交及各回交组中的CFM值均显著低于褐牙鲆自交(P < 0.05)。同时，利用AFLP对回交子代基因组的变化进行了分析，发现回交中不仅存在亲本位点的丢失(褐牙鲆回交子代-回交1, 3.96%; 夏牙鲆回交子代-回交2, 6.03%)的现象，也存在非亲位点(回交1, 5.63%; 回交2, 3.28%)的现象。而且，两回交组合分别有27.40%和31.18%的AFLP标记偏离孟德尔遗传。 3. 利用线粒体DNA 16S rDNA、COⅠ基因及核基因rag1的部分序列对正反交及回交子代的线粒体及核DNA的传承进行分析，发现正反交子代的16S rDNA和线粒体DNA片段的同源性和母本一致，各回交组中16S rDNA和COⅠ基因片段与褐牙鲆的同源性较高 (98%)，这表明褐牙鲆和夏牙鲆杂交及回交遵循母性遗传规律。但在回交子代中发现16S rDNA和COⅠ基因具有多种单倍型。褐牙鲆和夏牙鲆的rag1基因具有高度的保守性，但在正交子代中发现rag1多种单倍型。 4. 进一步利用线粒体DNA的16S rDNA、COⅠ基因的部分序列对8种重要海水养殖鱼类的系统进化分析，计算了其种间的遗传距离。根据这几种鲆鲽鱼的杂交是否可行的试验结果，评价种间遗传距离与杂交可适度的关系，结果表明，这8种鲆鲽鱼类的种间遗传距离与杂交可适度呈显著的负相关 (r2 = 0.805，P < 0.01)，即种间遗传分化越大，杂交成功的可能性越小，这表明鲆鲽鱼类中可能存在物种进化的不亲和钟 (Incompatibility clock)。

青岛近海六种海产鱼染色体组型的比较研究

采用活体注射秋水仙碱制备鱼类肾细胞染色体、PHA肌肉注射制备肾细胞染色体和鱼类早期胚胎制备染色体等多种方法。以空气干燥法制片Giemsa染色，对鲻鱼Mugil cephalus Linnaeus、真鲷Pagrosomus major（Temminck et Schlegel）、黑鲷Sparus macrocephalus（Basilewsky）、黑鮶Sebastes schlegeli （Hilgendorf）、石鲽Kareius bicoloratus （Basilewsky）、牙鲆Paralichthys olivaceus （Temminck et Schlegel）等分属四目、五科的六种海产鱼的染色体组型进行了考察和分析。研究结果表明：1、一般活体注射秋水仙碱制备海产鱼肾细胞染色体方法的有丝分裂指数虽然略低于PHA制备肾细胞染色体方法的有丝分裂指数。但它是最快最简便且很有效的方法，利用鱼类早期胚胎制备海产鱼染色体标本的方法也很有效，但要受到生物季节的限制。2、通过对六种海产鱼染色体组型分析得到，鲻鱼为48条端部着丝点染色体；真鲷的二倍体2n=48，有1对亚端部着丝点染色体。其余全部为端部着丝点染色体；黑鲷的二倍体2n=48。有3对中部着丝点染色体。2对亚中部着丝点染色体，其余全部为端部着丝点染色体。黑鮶的二倍体2n=48，有1对中部着丝点染色体，其余全部为端部着丝点染色体，石鲽的二倍体2n=48。全部为端部着丝点染色体；牙鲆的二倍体2n=48，全部为端部着丝点染色体。本文还对鱼类染色体的多态现象以及染色与进化的关系进行了讨论。

牙鲆肌肉发育调节基因的克隆、表达及功能分析

本文克隆了牙鲆的成肌因子MyoD和Myf5，以及牙鲆的Forkhead基因FoxD1、 FoxD3和FoxD5，并对其在牙鲆肌肉发育中的功能进行了分析。 牙鲆MyoD和Myf5基因都具有三个外显子，两个内含子。其编码的氨基酸序列都含有保守的bHLH；牙鲆FoxD1，FoxD3，FoxD5基因都只有一个外显子，编码的氨基酸序列都含有保守的翼状螺旋DNA结合结构域。 在胚胎发育早期，Myf5在近轴中胚层中表达，体节发生过程中，Myf5在体节中表达，MyoD基因最早在分节板的体节前细胞中表达，随后在近轴细胞、体节中表达；随着胚胎的发育，Myf5在成熟体节中表达量降低，在新生体节中表达较强；MyoD自30个体节时期后只在新生的尾部体节中表达，在成熟的体节中表达量降低；在孵化期，MyoD和 Myf5在头部及鳍的肌肉、尾部的体节中表达；生长期的牙鲆中，Myf5在骨骼肌和肠中表达，成体牙鲆中，Myf5只在肌肉中表达；生长期的牙鲆及成体牙鲆中，MyoD只在肌肉组织中表达。 牙鲆MyoD和Myf5的启动子可以驱动绿色荧光蛋白在斑马鱼肌肉纤维中表达，其包含了这两个基因正常表达所需的核心区域，并可以跨物种行使功能。 在胚胎发育早期，FoxD3在未迁移神经嵴前体细胞、体节、耳后的基板、头部和躯干的神经嵴细胞、松果体中表达。牙鲆FoxD1主要在脑，体节，肾脏及肠中表达。牙鲆FoxD5主要在体节、尾芽、前脑、耳泡中表达。 在斑马鱼中过量表达牙鲆FoxD3，并与斑马鱼的同源基因进行比较，结果表明注射牙鲆和斑马鱼FoxD3的斑马鱼胚胎表型一致，它们在中轴两侧的发育出现了不同步现象，MyoD和Myf5在近轴中胚层中的表达受到不同程度抑制。因此，FoxD3在不同物种之间保守，并且FoxD3在肌肉发育的调控通路中可能通过与MyoD和Myf5相互作用而行使功能。 在斑马鱼中过量表达FoxD1后，MyoD在一侧体节中的表达受到了严重抑制，而在近轴细胞中的表达未受影响，Myf5在体节前中胚层，近轴细胞，及体节中的表达都受到了抑制。FoxD1在胚胎发育的早期可能通过调控MyoD和Myf5的表达而参与肌肉发育的调控。 将牙鲆FoxD5在斑马鱼中过量表达，MyoD在一侧体节中的表达量有所升高，而在近轴细胞中的表达未受影响；Myf5在一侧体节和体节前中胚层中的表达也有所升高，表明牙鲆FoxD5可以调控肌肉调节因子MyoD和Myf5的表达而参与早期肌肉发育的调控。

牙鲆性腺分化发育及类固醇激素T和E2对性腺分化的影响

本文采用组织学手段研究了牙鲆性腺在分化、发育和成熟过程中的变化。然后，通过放射性免疫方法（RIA）测定了牙鲆仔稚幼鱼全组织匀浆液中的性类固醇激素—睾酮（T）和雌二醇（E2）的含量，并结合牙鲆血清中T和E2含量的年周期测定，从内分泌学水平探讨了T和E2在其性腺分化、发育和成熟过程中水平的变化规律。同时，采用高温和雌性激素对性腺未分化的普通和雌核发育牙鲆仔稚鱼进行诱导处理，获得了较高比例的雄性鱼/假雄鱼或100%雌性鱼；并研究了这些外界环境因子对牙鲆性腺分化、性别比率及体内T和E2水平的影响，藉此探讨了牙鲆性别决定与性腺分化的细胞学和内分泌学机制。 对牙鲆仔稚幼鱼性腺的组织切片观察发现，培育水温18~20℃下，孵化后第45天、平均全长<22.0±2.8 mm的牙鲆，其性腺分化尚未开始，属于原始性腺；在孵化后70日龄、平均全长为38.0±1.7 mm左右，部分个体中观察到卵巢的雏形，其余个体的性腺在此阶段以及之后的一段时间内变化并不明显；到了第110天、平均全长达到86.5±5.9 mm时，雌性个体卵巢出现了卵原细胞向卵母细胞的转变，标志着卵巢分化的结束。在90日龄、平均全长为63.5±3.4 mm的雄性牙鲆中，精原细胞快速增殖，并观察到了输精管结构；进一步的细胞学分化则出现在100日龄、平均全长为76.0±8.6 mm的个体中，此时可以看到精小叶的形成；在平均全长为140.0±15.2 mm时，精巢中出现初级精母细胞，标志着性腺分化的基本完成。 对牙鲆仔稚幼鱼全组织匀浆和成鱼血清中的T和E2水平的比较发现，在全长为6 mm左右的仔鱼中T和E2含量均较高。随后，在性腺分化过程中T含量大大降低，E2的含量急剧增高，而性腺分化后期E2含量又降到较低的水平。在雄性牙鲆成鱼中， 从精巢第Ⅲ期开始，T含量随着精巢的发育而增加，到了精巢第Ⅴ期性腺发育成熟并排精后，又降低到较低的水平；E2含量在从精巢第Ⅲ期发育至精巢第Ⅴ期过程中略呈降低的趋势，但是总体上来说没有明显的差异。在雌性牙鲆成鱼中，卵巢从第Ⅱ期到第Ⅳ期的过程中，T水平逐渐升高，在第Ⅴ期时则明显降低；而E2含量在卵巢第Ⅱ期时保持较低的水平，随着卵巢的发育，E2含量逐渐增高，在卵巢第Ⅳ期时达到最高水平，在第Ⅴ期产卵后又有所降低。在雌雄个体中T和E2均呈现周期性的变化。5月份随着水温的升高，雄性个体T和E2含量显著上升；到了9月份又逐渐下降至最低值。雌性个体E2含量自3月份开始增高，在5月份急剧升高，并在6月份达到最高值；在7月份的时候，E2突然降低，而到了8月份又有所回升；9月份之后E2逐渐降低并在1月份左右降到最低；而T的含量分别在2月份和6月份出现两次高峰。 温度诱导牙鲆幼鱼性腺分化的结果表明，牙鲆中存在明显的TSD机制，即其性腺分化因饲育水温的不同而变化：在一定温度范围内，随着饲育温度的增加，牙鲆的雄性比例逐渐增高，常温对照组和21℃组中的雄性比例分别为51.62%、60.00%，而在24℃和28℃高温组中，雄性比例显著高于对照组，分别达到73.33%和87.27%。T和E2含量测定显示，在性腺分化时期，高温和对照组中T含量没有明显的变化，而温度处理组中的E2水平则低于对照组，特别是在28℃高温组，其E2水平显著低于对照组（P<0.05）。外源E2处理性腺未分化的牙鲆幼鱼的结果也表明，牙鲆的死亡率与雌性化比率均为雌性激素剂量依赖型的。随着外源E2剂量的增加，雌性比率增加，但同时死亡率也增高。此期间T和E2水平比较发现，在性腺分化时期，对照组中的T含量稍高于雌激素处理组；而对照组中的E2含量高于0.2 ppm和2 ppm两个低剂量组，却低于20 ppm和100 ppm两个高剂量组。 同时，还对人工诱导培育的雌核发育牙鲆和性反转牙鲆进行了性腺发育观察，在所观察的雌核发育牙鲆个体中，其雌性比例为83.33%，而高温28℃饲育群体中的雄性比例（即假雄鱼比例）为91.67%；在雌性个体中，也有一定比例的个体性腺发育不正常，有的性腺发育较小，有的则缺少部分性腺。进一步对雌核发育成体的血清中T和E2含量进行测量，发现在普通牙鲆个体中T含量显著低于雌核发育个体，而E2含量则高于雌核发育牙鲆；在雌核发育牙鲆中，性腺发育不正常的个体比性腺发育正常的个体中的T含量稍高，而E2含量则显著低于正常雌核发育牙鲆个体和普通牙鲆个体（P< 0.05）。

肉食性鱼类补偿生长特性的研究

本文主要以花鲈[Lateolabrax．japonicus (C．& V．)]和褐牙鲆[Paralichthys olivaceus(T. & S.)]作为海洋肉食性鱼类的代表种类，根据鱼类生态生理学理论，通过设定不同饥饿时问下因子水平，研究两种鱼类摄食率、排粪率、转化效率和SGR等生态生理效率的状态变化。其目的在于研究高营养级鱼类在海洋生态系统中的下行控制作用(Top-down Effect)，以及肉食性鱼类的生态对策与鱼类资源补充机制的相互关系，为深入解析鱼类资源生产力及其持续利用海洋生物资源，提供科学依据。其主要研究结果概述如下：1．花鲈： 饥饿0(对照组)、4、8、12、16d后恢复投喂，过量投喂淡水桡足类，温度为19.5±2.0℃，初始体重为0.61-0.93g，平均体重为0．79g实验周期为28d。1.1饥饿时间对花鲈的体重损失率产生显著影响，受过饥饿的个体的湿重失率 (LR_W)与饥饿时间(t)的关系为：LR_W=2.2164t-3.6634(r~2=0.9767，p13d)的个体的排粪率显著大于其它各组，其它各组间排粪率差异不显著；2.2在整个实验周期36d内，对照组与经受3—8d饥饿的实验组的SGR显著大于经受饥饿时间大于lOd的实验组，饥饿3-8d的完全补偿生长，饥饿10-15d 的个体发生部分补偿生长，饥饿18d的个体不能补偿生长；经受饥饿个体的摄食率低于对照组；除了饥饿18d的个体的饵料转化率显著小于对照组外，其它各组的转化率没有显著差异；经受长时间饥饿(>13d)的个体的排粪率显著大于其它各组，其它各组问没有显著的差异。2．3平均体重为2．59g的褐牙鲆，饥饿至不可恢复点(PNR)的时间大于18d。3．花鲈和褐牙鲆在经受饥饿后的体重损失率与饥饿的时间正相关。在实验期间，花鲈体重损失率与饥饿时间成一次线性关系，褐牙鲆体重损失率与饥饿时间成对数函数关系。在饥饿后均会发生补偿生长。3.1比较研究结果，表明在适当时间饥饿后的个体均会发生补偿生长，其超生长速度与饥饿时间密切相关。花鲈在饥饿至不可恢复点的临界状态时发生最强烈的超生长现象，而褐牙鲆则是在饥饿3—5d后恢复投喂时可以观测到最高速度的超生长。3.2经受适当时间饥饿后的个体在短期内，其摄食率大于对照组的摄食强度。曾经饥饿的时间越长，花鲈在饥饿结束后的摄食率越高，褐牙鲆在饥饿结束后的高摄食率持续的时间越长。3.3经受适当时间饥饿后的个体，在短期内的转化率均会大于对照组的转化 效率，且随饥饿时间而加强；高转化效率持续的时间与饥饿时间无关。褐牙鲆的高转化率持续的时间很短，且很快下降至低于对照组的水平，其下降程度与饥饿时问成正相关，经受过度饥饿的花鲈和褐牙鲆转化率显著低于对照组。3．4花鲈的补偿生长是饵料转化率提高的结果；而褐牙鲆的补偿生长的原因则因其经受的饥饿程度而异。从饥饿后恢复投喂较短的时间周期(4d和6d)看，花鲈和褐牙鲆的补偿生长是转化率和摄食率共同提高的结果；但从饥饿后恢复投喂较长的时问周期(12d和1 8d)看，经受短期(4-8d)饥饿的花鲈的补偿生长是转化率显著提高的结果，而经受长期(12d)饥饿的花鲈的补偿生长是转化率显著提高的结果，褐牙鲆则是摄食率显著提高的结果。3．5从整个实验周期来看，对花鲈的饥饿降低了其生长速度和饵料转化率，但对褐牙鲆的短期饥饿(<8d)不会降低其生长速度，也不会影响一定时间(3-13d)饥饿的个体的饵料转化率。