Native homing endonucleases can target conserved genes in humans and in animal models.

In recent years, both homing endonucleases (HEases) and zinc-finger nucleases (ZFNs) have been engineered and selected for the targeting of desired human loci for gene therapy. However, enzyme engineering is lengthy and expensive and the off-target effect of the manufactured endonucleases is difficult to predict. Moreover, enzymes selected to cleave a human DNA locus may not cleave the homologous locus in the genome of animal models because of sequence divergence, thus hampering attempts to assess the in vivo efficacy and safety of any engineered enzyme prior to its application in human trials. Here, we show that naturally occurring HEases can be found, that cleave desirable human targets. Some of these enzymes are also shown to cleave the homologous sequence in the genome of animal models. In addition, the distribution of off-target effects may be more predictable for native HEases. Based on our experimental observations, we present the HomeBase algorithm, database and web server that allow a high-throughput computational search and assignment of HEases for the targeting of specific loci in the human and other genomes. We validate experimentally the predicted target specificity of candidate fungal, bacterial and archaeal HEases using cell free, yeast and archaeal assays.

Business Sphere, Vol. 17, no.2

Anadvanced foods economy is under development in the state of Iowa that builds on Iowa’s established strengths in plant and animal sciences,production agriculture, food science, nutrition, and processing technology. This new pathway was identified when Battelle Institute studied Iowa’s strengths in the biosciences and recommended six technology platforms as opportunities to use these strengths for growing the economy. One of those technology platforms is functional foods, sometimes called nutraceuticals.

Business Sphere, Vol. 20, no.2

With its central U.S. location, access to a plethora of agricultural raw materials, a highly educated and skilled workforce, and a supportive state government; food and ingredient manufacturers find many advantages to locating in Iowa. Another major plus for Iowa’s food makers is access to one of the strongest food science and human nutrition programs in the nation, located on the campus of Iowa State University (ISU). At ISU, you will find scientists who will assist your organization in bringing food related innovations in plant, animal and microbial products to commercialization. The Department of Food Sciences and Human Nutrition (FSHN) is jointly administered by the Colleges of Agriculture and Life Sciences and Human Sciences. Our mission is to generate new knowledge around food and human nutrition and to promote health through food.

Animal Industry News, 2010, Vol. 11, no. 1

Newsletter produced by Department of Agriculture and Land Stewardship about the animal industry in Iowa.

Sustainability - a challenge to animal production and breeding

Selostus: Kestävän kehityksen vaatimukset kotieläintuotannossa ja -jalostuksessa

OpenFluDB, a database for human and animal influenza virus.

Although research on influenza lasted for more than 100 years, it is still one of the most prominent diseases causing half a million human deaths every year. With the recent observation of new highly pathogenic H5N1 and H7N7 strains, and the appearance of the influenza pandemic caused by the H1N1 swine-like lineage, a collaborative effort to share observations on the evolution of this virus in both animals and humans has been established. The OpenFlu database (OpenFluDB) is a part of this collaborative effort. It contains genomic and protein sequences, as well as epidemiological data from more than 27,000 isolates. The isolate annotations include virus type, host, geographical location and experimentally tested antiviral resistance. Putative enhanced pathogenicity as well as human adaptation propensity are computed from protein sequences. Each virus isolate can be associated with the laboratories that collected, sequenced and submitted it. Several analysis tools including multiple sequence alignment, phylogenetic analysis and sequence similarity maps enable rapid and efficient mining. The contents of OpenFluDB are supplied by direct user submission, as well as by a daily automatic procedure importing data from public repositories. Additionally, a simple mechanism facilitates the export of OpenFluDB records to GenBank. This resource has been successfully used to rapidly and widely distribute the sequences collected during the recent human swine flu outbreak and also as an exchange platform during the vaccine selection procedure. Database URL: http://openflu.vital-it.ch.

Effects of composite casein and [beta]-lactoglobulin genotypes on renneting properties and composition of bovine milk by assuming an animal model

Selostus: Kaseiinien yhdistelmägenotyyppien ja [beta]-laktoglobuliinin genotyyppien vaikutus maidon juoksettumisominaisuuksiin ja koostumukseen

Distribuição e caracterização de substâncias húmicas em vermicompostos de origem animal e vegetal

A utilização de resíduos orgânicos, como fertilizantes e condicionadores de solo, requer sua maturação e monitoramento da qualidade do material resultante. A vermicompostagem é uma técnica que, ao longo do processo, elimina os potenciais efeitos adversos dos resíduos à saúde humana e ao solo. A avaliação das substâncias húmicas (SH) nos produtos finais quanto à quantidade e à qualidade permite inferir sobre o grau de estabilidade e maturidade dos vermicompostos. Este trabalho objetivou avaliar a qualidade de seis vermicompostos das seguintes matérias-primas: esterco bovino (EB), esterco ovino (EO), esterco suíno (ES), esterco de codorna (EC), borra de café (BC) e de erva-mate (BE) com respeito ao teor de ácidos húmicos (AH) e de ácidos fúlvicos (AF) e às suas características químicas, após 70 dias de compostagem. O fracionamento químico da matéria orgânica foi realizado com base na solubilidade em meio básico e ácido e a distribuição de cada fração calculada como percentual do C total. Foram calculados os índices de humificação: percentual de AH e razão AH/AF. Nos AH e AF purificados, determinaram-se a composição elementar (CHNO), a composição química por espectroscopia de infravermelho com transformada de Fourier (FTIR) e o índice de aromaticidade I1630/I2920. O teor de substâncias húmicas (AH+AF) decresceu na seqüência: BC > EO≈ BE≈ EB > ES > EC, tendo sua composição química também diferido entre os vermicompostos. O grau de maturidade foi superior nos vermicompostos de resíduos de origem vegetal (borra de café e de erva-mate). Os AH desses dois vermicompostos apresentaram menor proporção de grupos oxigenados e menor caráter aromático.

The EU strategy of policy convergence with its neighbours in the area of trade

The objective of this paper is to ascertain whether the EU is seeking policy convergence with its neighbours in the area of trade by means of EU regulations. For each trade- related topic, we carried out a content analysis of the available official documents to identify the model of relations that has been established between the EU and four neighbouring countries (Morocco, Algeria, Ukraine and Georgia). The findings indicate that Europeanization is the EU strategy in most cases. However, adaptation to European regulations is only a long-term aim. When international regulations exist in a specific area, the EU usually demands the internationalization of a country¿s regulations as a first step. When there are no international regulations, the convergence process is established on the basis of bilaterally developed norms. EU strategy also varies depending on the country. Its relations with Algeria are the most particular. We conclude that the EU is promoting policy convergence with its neighbours in the area of trade mainly on the basis of international and bilaterally-developed regulations.

Complementarity between human capital and trade in regional technological progress

The effect of openness and trade orientation on economic growth remains a highly contentious issue in the literature. Trade facilitates the spread of knowledge and the adoption of more advanced and efficient technologies, which hastens total factor productivity (TFP) growth and, hence, per capita income. New technologies that spread through trade require a sufficiently skilled labour force to adapt them to the domestic productive environment. Thus, openness and human capital accumulation will lead to TFP growth and the greater the complementarity between both variables, the higher the TFP growth. This paper discusses the implications of these assumptions and tests their empirical validity, using a pool of data for manufacturing industry in Spanish regions in a period in which both the stock of human capital and openness experienced a notable increase.

Animal Industry News, February 2001, Vol. 2, no. 1

Newsletter produced by Department of Agriculture and Land Stewardship about the animal industry in Iowa.

Animal Industry News, April 2002, Vol. 3, no. 1

Newsletter produced by Department of Agriculture and Land Stewardship about the animal industry in Iowa.