Plasmodium vivax lineages: geographical distribution, tandem repeat polymorphism, and phylogenetic relationship

Background: Multi-drug resistance and severe/ complicated cases are the emerging phenotypes of vivax malaria, which may deteriorate current anti-malarial control measures. The emergence of these phenotypes could be associated with either of the two Plasmodium vivax lineages. The two lineages had been categorized as Old World and New World, based on geographical sub-division and genetic and phenotypical markers. This study revisited the lineage hypothesis of P. vivax by typing the distribution of lineages among global isolates and evaluated their genetic relatedness using a panel of new mini-satellite markers. Methods: 18S SSU rRNA S-type gene was amplified from 420 Plasmodium vivax field isolates collected from different geographical regions of India, Thailand and Colombia as well as four strains each of P. vivax originating from Nicaragua, Panama, Thailand (Pak Chang), and Vietnam (ONG). A mini-satellite marker panel was then developed to understand the population genetic parameters and tested on a sample subset of both lineages. Results: 18S SSU rRNA S-type gene typing revealed the distribution of both lineages (Old World and New World) in all geographical regions. However, distribution of Plasmodium vivax lineages was highly variable in every geographical region. The lack of geographical sub-division between lineages suggests that both lineages are globally distributed. Ten mini-satellites were scanned from the P. vivax genome sequence; these tandem repeats were located in eight of the chromosomes. Mini-satellites revealed substantial allelic diversity (7-21, AE = 14.6 +/- 2.0) and heterozygosity (He = 0.697-0.924, AE = 0.857 +/- 0.033) per locus. Mini-satellite comparison between the two lineages revealed high but similar pattern of genetic diversity, allele frequency, and high degree of allele sharing. A Neighbour-Joining phylogenetic tree derived from genetic distance data obtained from ten mini-satellites also placed both lineages together in every cluster. Conclusions: The global lineage distribution, lack of genetic distance, similar pattern of genetic diversity, and allele sharing strongly suggested that both lineages are a single species and thus new emerging phenotypes associated with vivax malaria could not be clearly classified as belonging to a particular lineage on basis of their geographical origin.

Análisis al Proceso de Titulación Minera en Colombia desde TOC (Theory Of Constraints)

El incumplimiento reiterado de la normatividad y políticas relacionadas con los tiempos de respuesta del proceso de contratación minera del país, desarrollado actualmente por la recién creada Agencia Nacional de Minería ANM, ha suscitado que la administración del recurso minero no se realice bajo los principios de eficiencia, eficacia, economía y celeridad. Estas debilidades manifiestas provocan represamientos en la resolución de trámites, congelación de áreas para contratar, sobrecostos, demoras en los tiempos de respuesta establecidos por la normatividad vigente y trae como consecuencia incertidumbre en los inversionistas mineros y pérdidas por concepto de recaudo de canon superficiario, entre otras. El objetivo del presente trabajo de investigación consiste en analizar el proceso de titulación minera de Colombia a partir de la filosofía de mejora continua desarrollado en la teoría de restricciones TOC (Theory Of Constraints), para poder identificar cuáles son los cuellos de botella que no permiten que el proceso fluya de manera adecuada y proponer alternativas de mejora, que con su implementación exploten y subordinen la limitaciones al sistema.

Soft budget constraints in a dynamic general equilibrium model

This paper considers an overlapping generations model in which capital investment is financed in a credit market with adverse selection. Lenders’ inability to commit ex-ante not to bailout ex-post, together with a wealthy position of entrepreneurs gives rise to the soft budget constraint syndrome, i.e. the absence of liquidation of poor performing firms on a regular basis. This problem arises endogenously as a result of the interaction between the economic behavior of agents, without relying on political economy explanations. We found the problem more binding along the business cycle, providing an explanation to creditors leniency during booms in some LatinAmerican countries in the late seventies and early nineties.

Dynamic programming for stochastic target problems, Viscosity solutions and hedging in markets with Portfolio constraints and large investors

The purpose of this expository arti le is to present a self- ontained overview of some results on the hara terization of the optimal value fun tion of a sto hasti target problem as (dis ontinuous) vis osity solution of a ertain dynami programming PDE and its appli ation to the problem of hedging ontingent laims in the presen e of portfolio onstraints and large investors

Education and training governance through learning outcomes : possibilities and constraints in Italy

Resumen tomado de la publicaci??n.

Learning and teaching using digital books : opportunities and constraints

Resumen basado en el de la publicaci??n

Preservar e desenvolver em museologia, contributo para o estudo do objecto e do processo museológico

Este trabalho procurou uma resposta para a aparente contradição entre os actos de preservar e de desenvolver no trabalho museológico. E desejava, com essa resposta, obter uma compreensão mais profunda sobre a Museologia. Utilizando a metodologia de investigação “Grounded Theory” (Glaser & Strauss, 1967; Ellen, 1992; Mark, 1996; Marshall & Rossman, 1999) adoptou a definição de museu dos Estatutos do ICOM (2001) como ponto de partida conceptual para o desenrolar da pesquisa. A - Com o esforço necessário à obtenção da resposta inicial o trabalho pôde alcançar os seguintes resultados: i) Discerniu as fases e a racionalidade do processo museológico, através do qual os objectos adquirem a “identidade patrimonial”. ii) Formulou o conceito de “objecto museológico” numa acepção distinta do de Património ou de “objecto patrimonial”, permitindo confirmar que a contradição formulada na hipótese inicial só poderia desaparecer, ou ser conciliada, num paradigma de trabalho museológico concebido como um acto de comunicação. iii) Propôs, em consequência, um diferente Programa para a orientação do trabalho museológico, demonstrando que garantiria ao património uma maior perenidade e transmissibilidade, sendo ainda capaz de incluir o património referente à materialidade, à iconicidade, à oralidade e à gestualidade dos objectos. iv) Propôs um Léxico de Conceitos capaz de justificar essas novas propostas. v) Sugeriu um índice de desenvolvimento museal (IDM = Σ ƒξ [IP.ID.IC] / CT.CR) para ser possível avaliar e quantificar o trabalho museológico. B – Para o objectivo de uma compreensão mais profunda da Museologia o trabalho alcançaria os seguintes resultados: vi) Verificou a necessidade de se dominarem competências de Gestão, para o trabalho museológico não se restringir apenas a um tipo de colecções ou de património. vii) Sugeriu, para ser possível continuar a investigar a Museologia como um novo ramo ou disciplina do saber, a necessidade estratégica de a ligar ao estudo mais vasto da Memória, apontando dois caminhos: Por um lado, considerar a herança filogenética dos “modos de guardar informações” entre os diferentes organismos e sistemas (Lecointre & Le Guyader, 2001). Por outro lado, considerar os constrangimentos ocorridos durante a ontogenia e a maturação individual que obrigam a ter em consideração, no processamento da memória e do património (codificação, armazenamento, evocação e recuperação, esquecimento), a biologia molecular da cognição (Squire & Kandel, 2002).

Adaptive constraints for feature tracking

In this paper extensions to an existing tracking algorithm are described. These extensions implement adaptive tracking constraints in the form of regional upper-bound displacements and an adaptive track smoothness constraint. Together, these constraints make the tracking algorithm more flexible than the original algorithm (which used fixed tracking parameters) and provide greater confidence in the tracking results. The result of applying the new algorithm to high-resolution ECMWF reanalysis data is shown as an example of its effectiveness.

Weak constraints in four-dimensional variational data assimilation

The formulation of four-dimensional variational data assimilation allows the incorporation of constraints into the cost function which need only be weakly satisfied. In this paper we investigate the value of imposing conservation properties as weak constraints. Using the example of the two-body problem of celestial mechanics we compare weak constraints based on conservation laws with a constraint on the background state.We show how the imposition of conservation-based weak constraints changes the nature of the gradient equation. Assimilation experiments demonstrate how this can add extra information to the assimilation process, even when the underlying numerical model is conserving.

Seeing things: perception, experience and the constraints of excavation

Recent attempts to problematize archaeological fieldwork concerned with excavation at the expense of surface survey, and with questions of procedure more than interpretations of the past. In fact these two kinds of fieldwork offer quite different possibilities and suffer from different constraints. Thought must be given to ways in which they can be combined if they are to make a real contribution to social archaeology. The argument is illustrated by a project carried out at a megalithic cemetery in Scotland.