Are shrubs really a sign of declining ecosystem function? Disentangling the myths and truths of woody encroachment in Australia

Since European settlement, there has been a dramatic increase in the density, cover and distribution of woody plants in former grassland and open woodland. There is a widespread belief that shrub encroachment is synonymous with declines in ecosystem functions, and often it is associated with landscape degradation or desertification. Indeed, this decline in ecosystem functioning is considered to be driven largely by the presence of the shrubs themselves. This prevailing paradigm has been the basis for an extensive program of shrub removal, based on the view that it is necessary to reinstate the original open woodland or grassland structure from which shrublands are thought to have been derived. We review existing scientific evidence, particularly focussed on eastern Australia, to question the notion that shrub encroachment leads to declines in ecosystem functions. We then summarise this scientific evidence into two conceptual models aimed at optimising landscape management to maximise the services provided by shrub-encroached areas. The first model seeks to reconcile the apparent conflicts between the patch- and landscape-level effects of shrubs. The second model identifies the ecosystem services derived from different stages of shrub encroachment. We also examined six ecosystem services provided by shrublands (biodiversity, soil C, hydrology, nutrient provision, grass growth and soil fertility) by using published and unpublished data. We demonstrated the following: (1) shrub effects on ecosystems are strongly scale-, species- and environment-dependent and, therefore, no standardised management should be applied to every case; (2) overgrazing dampens the generally positive effect of shrubs, leading to the misleading relationship between encroachment and degradation; (3) woody encroachment per se does not hinder any of the functions or services described above, rather it enhances many of them; (4) no single shrub-encroachment state (including grasslands without shrubs) will maximise all services; rather, the provision of ecosystem goods and services by shrublands requires a mixture of different states; and (5) there has been little rigorous assessment of the long-term effectiveness of removal and no evidence that this improves land condition in most cases. Our review provides the basis for an improved, scientifically based understanding and management of shrublands, so as to balance the competing goals of providing functional habitats, maintaining soil processes and sustaining pastoral livelihoods.

Does outmigration lead to land degradation? Labour shortage and land management in a western Nepal watershed

In Nepal, changing demographic patterns are leading to changes in land use. The high level of outmigration of men in the hills of Kaski District, Western Development Region of Nepal, is affecting the household structure but also land management. Land is often abandoned, as the burden on those left behind is too high. How do these developments affect the state of the land in terms of land degradation? To find out, we studied land degradation, land abandonment caused by outmigration, and existing sustainable land management practices in a subwatershed in Kaski District. Mapping was done using the methodology of the World Overview of Conservation Approaches and Technologies (WOCAT). While previous studies expected land abandonment to exacerbate slope erosion, we demonstrate in this paper that it is in fact leading to an increase in vegetation cover due to favourable conditions for ecosystem recovery. However, negative impacts are several, including the increase of invasive species harmful to livestock and a decline in soil fertility. Traditional land management practices such as terraces and forest management exist. To date, however, these measures fail to take account of the changing population dynamics in the region, making the question of how migration and land degradation are linked worth revisiting.

White lupin (Lupinus albus L.), the neglected multipurpose crop: Its production and utilization in the mixed crop-livestock farming system of Ethiopia

A survey was conducted to generate holistic information on the production and utilization of local white lupin in two lupin growing districts, namely, Mecha and Sekela, representing mid and high altitude areas, respectively in North-western Ethiopia. During the survey, two types of participatory rural appraisal (PRA) techniques, namely, individual farmer interview (61 farmers from Mecha and 51 from Sekela) and group discussion (with 20 farmers from each district) were employed. There are significant differences (P<0.05) between the two study districts for the variables like total land holding, frequency of ploughing during lupin planting, days to maturity, lupin productivity, and number of days of soaking lupin in running water. However, there are no significant differences (P>0.05) between the two study districts for the variables like land allocated for lupin cultivation, lupin seed rate, lupin soaking at home, lupin consumption per family per week and proportion of lupin used for household consumption. The use of the crop as livestock feed is negligible due to its high alkaloid content. It is concluded that the local white lupin in Ethiopia is a valuable multipurpose crop which is being cultivated in the midst of very serious shortage of cropland. Its ability to maintain soil fertility and serve as a source of food in seasons of food scarcity makes it an important crop. However, its bitter taste due to its high alkaloid content remains to be a big challenge and any lupin improvement strategy has to focus on minimizing the alkaloid content of the crop.

Effects of biotechnology on biodiversity: herbicide-tolerant and insect-resistant GM crops

Biodiversity is threatened by agriculture as a whole, and particularly also by traditional methods of agriculture. Knowledge-based agriculture, including GM crops, can reduce this threat in the future. The introduction of no-tillage practices, which are beneficial for soil fertility, has been encouraged by the rapid spread of herbicide-tolerant soybeans in the USA. The replacement of pesticides through Bt crops is advantageous for the non-target insect fauna in test-fields. The results of the British Farm Scale experiment are discussed. Biodiversity differences can mainly be referred to as differences in herbicide application management.

Biochar and Managed Perennial Ecosystems

Biochar is a carbon-rich material that is similar to charcoal. It is produced when biomass is burned in the absence of oxygen, a process otherwise known as pyrolysis. Pyrolysis and the production of biochar are currently being promoted as a means to both produce domestic fuel (bio-oil) while concurrently producing a co-product that increases crop yield and sequesters carbon in the soil (biochar). While there may be many potential benefits in the application of biochar to agricultural soils, such as enhanced soil fertility and improved soil water status, there are no studies of higher-order ecological and ecosystem effects of biochar and its potential synergistic interactions (either positive or negative) on complex perennial systems. The goal of this field experiment is to determine how biochar and manure addition directly affect ecosystem structure and function in perennial systems, specifically soil nutrients, water, plants, and soil organisms.

Dinámica temporal de la masa de broza en distintos microhábitats del desierto del Monte Central (Mendoza, Argentina)

Uno de los mecanismos propuestos para el enriquecimiento del suelo generado bajo la cobertura de leñosas en zonas áridas es la relocalización de nutrientes absorbidos por sus extensos sistemas radicales hacia el área bajo su dosel. Sin embargo, el efecto final sobre la fertilidad del suelo depende de los distintos procesos que transforman la broza y liberan nutrientes. Prosopis flexuosa D.C. (algarrobo) es la especie leñosa de mayor producción de broza y genera islas de fertilidad bajo su dosel en el Monte Central. En este trabajo analizamos la dinámica temporal de la masa de la broza caída bajo P. flexuosa, en distintos microhábitats (bajo la copa de P. flexuosa, bajo Larrea divaricata, en áreas próximas a árboles talados, y en áreas expuestas). Encontramos una mayor disminución en la masa de broza en invierno, sin diferencias entre microhábitats, y menores tasas de pérdida y mayor heterogeneidad espacial en primavera y verano. Nuestros resultados sugieren que la dinámica de la broza depende principalmente de su composición, ya que es mayor la tasa de pérdida, inmediatamente después del ingreso de broza producida por la caída de hojas de P. flexuosa no obstante las condiciones ambientales desfavorables para la actividad de microorganismos. A pesar de observarse diferencias en la dinámica de la broza entre los microhábitats, la magnitud total de los cambios de masa de broza no presenta una variabilidad espacial importante. Por el contrario, se detectó relocalización secundaria de broza, producto de la actividad de artrópodos y posiblemente otros factores (agua-viento), los que podrían actuar como moderadores de las diferencias generadas por la concentración de broza bajo las leñosas.

Bio recuperación de suelos salinos con el uso de materiales orgánicos.

El suelo es un importante recurso natural que necesita ser preservado y mejorado para permitirle mantener su calidad y capacidad productiva, para ello se deben proponer y aplicar prácticas sostenibles que permitan recuperar aquellos suelos degradados por un mal manejo del hombre, como por ejemplo la salinización. El objetivo planteado fue evaluar la biorecuperación de un suelo con problemas salino-sódico con la aplicación de dos proporciones (1,5 y 3% (p/p)) de tres enmiendas orgánicas: compost, vermicompost sólido y Lemna mesclados o no con el 100% de los requerimientos de fosfoyeso, generándose 15 tratamientos (incluyendo tres controles). La evaluación se realizó a través de tres ensayos: 1. Columnas simuladas de suelo. 2. Evolución de CO2 y 3. Crecimiento de plántulas de tomate. El suelo objeto de estudio está clasificado my como Fluventic Haplustepts, y fue tomado de una zona de la Hacienda Alto Viento, con una latitud de 10° 2' 15 N y una longitud de 72 ° 34' 15 W, en el estado de Zulia – Venezuela. Se tomó una muestra compuesta por 20 submuestras de 20 cm de profundidad del área problema, se secó al aire (2,3% de humedad), se tamizó y homogenizó. El suelo y las enmiendas orgánicas fueron caracterizadas. Los materiales orgánicos; compost y vermicompost fueron procesados en la misma Hacienda con el uso de estiércol de ganado bovino; la Lemna fue recolectada de orillas del Lago de Maracaibo en la ciudad de Maracaibo. El suelo se mezcló a las proporciones indicadas se le midió respiración basal y el efecto sobre la germinación de semillas de tomate y se empaquetó en un tubo de polietileno de 7,1 cm de diámetro y 70 a 90 cm de longitud, según la altura de la mezcla del suelo con la enmienda. El fondo de cada columna fue rellenado con 40 cm de arena lavada para facilitar el drenaje. En cada columna se utilizó la misma cantidad de suelo (1055 mg), la altura que ocupó dentro de las columnas dependió del tipo de enmienda orgánica y su proporción, la cual modificó la Da del suelo (1,328±0,05 g•cm-3). La altura dentro de la columna varió desde 20 cm para el suelo sin enmienda hasta 38,33±0,8 cm para el suelo enmendado con Lemna al 3,0%. Transcurrido el periodo de tres meses tiempo en el cual el suelo enmendado y colocado en las columnas fue lavado con una cantidad de agua que equivalente a la tasa de infiltración, la cual se calculó a partir de la precipitación anual de la zona y las perdidas por evaporación y escorrentía; se fraccionó en tres secciones de 7, 7 y 6 cm de longitud, y el suelo de cada fracción se secó al aire y se tamizó, y se le midió CEextr, pH, cationes en solución y cationes extraíbles para calcular el RAS y el PSI. Se tomó una cantidad equivalente de cada sección para conformar una muestra de 50 g de suelos a los cuales se le midió respiración basal e igualmente se tomó suelo para evaluar la germinación y crecimiento de plántulas de tomate. Se detectaron diferencias significativa (p<0,05) entre tratamientos, según la prueba de Tukey, para la variables evaluadas, aunque no hubo diferencias entre las proporciones ni entre la utilización del fosfoyeso mezclado con las enmiendas orgánicas. La enmienda que mostró menos potencial en la bio remediación fue la Lemna por sus altos contenidos de Na+. La metodología de las columnas simuladas del suelo, bajo las condiciones de estudio, no fue del todo adecuada para evaluar la bio remediación debido que en el suelo control por efecto de la aplicación de agua también hubo recuperación del mismo por su disminución en el la CE, RAS y PSI y en algunas variables su recuperación fue mayor que en aquellos enmendados con Lemna. Tomando en la respuesta del cultivo la mejor enmienda fue el vermicompost Abstract The soil is an important natural resource that needs to be preserved and improved to maintain its quality and production potential. Therefore, it is necessary to propose and apply sustainable practices that permit the recovery of soils that have been degraded by inadequate management, among these saline soils. The objective of this study was to evaluate the bioremediation of a saline-sodic soil through the application of two proportions (1,5 and 3% (p/p) of three organic amendments: compost, vermicompost and Lemna, mixed or not with gypsum phosphate, resulting in 15 treatments (including 3 controls). The evaluation was conducted through three tests: 1. Simulated soil columns. 2. Evolution of CO2 and 3. Growth of tomato seedlings The soil under evaluation was classified as Fluventic Haplustepts and was collected from the Alto Viento farm located at 10° 2' 15 North Latitude and 72° 34' 15 West longitude, in Zulia State, Venezuela. A composite soil sample, integrated of 20 subsamples taken to a depth of 20 cm collected in the problem area, was air dried (2.3 % moisture), sieved and homogenized. Soil and organic amendments were characterized. Organic material for the compost and vermicompost were obtained on the farm using cattle manure, whereas the Lemna was collected from the shores of Lake Maracaibo outside Maracaibo city. The soil was mixed in the above-mentioned proportions and its baseline respiration rate and effect on the germination of tomato seeds were recorded. Soil was packed in a PVC pipe (7,1 cm diameter and 70-90 cm length) to simulate a soil column. The bottom of each column was filled out with 40 cm of washed sand to facilitate drainage. The same amount of soil was used in each column (1,055 mg), but the height of the column varied according to the organic amendment and its proportion, which modified the apparent density of the soil (1,328±0,05 g•cm-3). The height of each column varied from 20 cm for the soil without amendment to 38,33±0,8 cm for the soil with 3% Lemna. After three months, the soil was treated with water (using the equivalent of the problem area infiltration rate), and was divided into three sections (7, 7 and 6 cm length). The soil from each section was air dried, sieved and its cationic exchange capacity, pH, cation solutions and extractable cations were measured to estimate RAS and PSI. An equivalent portion of each section was collected to compose a 50 g soil sample, and baseline respiration rate and tomato seedlings growth were recorded. Statistical differences (p<0,05) were observed among treatments for the variables under evaluation. Tukey test showed no differences among the proportions of organic amendments nor with the addition of gypsum phosphate to the organic amendments. The amendment which showed the lowest bioremediation potential was the Lemna, as a result of its high Na+ concentration. Under the conditions of this study, the soil column methodology used showed limitations to evaluate bioremediation because the control soil column, after being rinsed with water, also showed improvements as CE, RAS and PSI values were reduced. For some variables, the improvement noted in the control soil column surpassed those obtained with the soil amended with Lemna. Based on the best crop response amendment was vermicompost 3%.

Regional and seasonal patterns of litterfall in tropical South America

The production of aboveground soft tissue represents an important share of total net primary production in tropical rain forests. Here we draw from a large number of published and unpublished datasets (n = 81 sites) to assess the determinants of litterfall variation across South American tropical forests. We show that across old-growth tropical rainforests, litterfall averages 8.61±1.91Mgha?1 yr?1 (mean±standard deviation, in dry mass units). Secondary forests have a lower annual litterfall than old-growth tropical forests with a mean of 8.01±3.41Mgha?1 yr?1. Annual litterfall shows no significant variation with total annual rainfall, either globally or within forest types. It does not vary consistently with soil type, except in the poorest soils (white sand soils), where litterfall is significantly lower than in other soil types (5.42±1.91Mgha?1 yr?1). We also study the determinants of litterfall seasonality, and find that it does not depend on annual rainfall or on soil type. However, litterfall seasonality is significantly positively correlated with rainfall seasonality. Finally, we assess how much carbon is stored in reproductive organs relative to photosynthetic organs. Mean leaf fall is 5.74±1.83Mgha?1 yr?1 (71% of total litterfall). Mean allocation into reproductive organs is 0.69±0.40Mgha?1 yr?1 (9% of total litterfall). The investment into reproductive organs divided by leaf litterfall increases with soil fertility, suggesting that on poor soils, the allocation to photosynthetic organs is prioritized over that to reproduction. Finally, we discuss the ecological and biogeochemical implications of these results.

Effects of sheep and horse manure and pine bark amendments on metal distribution and chemical properties of contaminated mine soils.

Mine soils usually contain large levels of heavy metals and poor fertility conditions which limit their reclamation and the application of phyto-remediation technologies. Two organic waste materials (pine bark compost and sheep and horse manure compost), with different pHs and varying degrees of humification and nutrient contents, were applied as amendments to assess their effects on copper (Cu) and zinc (Zn) bioavailability and on fertility conditions of mine soils. Soil samples collected from two abandoned mining areas near Madrid (Spain) were mixed with 0, 30 and 60 t ha?1 of the organic amendments. The concentrations of metals among the different mineral and organic fractions of soil were determined by several extraction procedures to study the metal distribution in the solid phase of the soil affected by the organic amendments. The results showed that the manure amendment increased the soil pH and the cation exchange capacity and enhanced the nutrient levels of these soils. The pine bark amendment decreased the soil pH and did not significantly change the nutrient status of soil. Soil pH, organic matter content and its degree of humification, which were altered by the amendments, were the main factors affecting Cu fractionation. Zn fractionation was mainly affected by soil pH. The addition of manure not only improved soil fertility, but also decreased metal bioavailability resulting in a reduction of metal toxicity. Conversely, pine bark amendment increased metal ioavailability. The use of sheep and horse manure could be a cost-effective practice for the restoration of contaminated mine soils.

Carbon allocation in north-western Amazon forests (Colombia)

Los estudios sobre la asignación del carbono en los ecosistemas forestales proporcionan información esencial para la comprensión de las diferencias espaciales y temporales en el ciclo del carbono de tal forma que pueden aportar información a los modelos y, así predecir las posibles respuestas de los bosques a los cambios en el clima. Dentro de este contexto, los bosques Amazónicos desempeñan un papel particularmente importante en el balance global del carbono; no obstante, existen grandes incertidumbres en cuanto a los controles abióticos en las tasas de la producción primaria neta (PPN), la asignación de los productos de la fotosíntesis a los diferentes componentes o compartimentos del ecosistema (aéreo y subterráneo) y, cómo estos componentes de la asignación del carbono responden a eventos climáticos extremos. El objetivo general de esta tesis es analizar los componentes de la asignación del carbono en bosques tropicales maduros sobre suelos contrastantes, que crecen bajo condiciones climáticas similares en dos sitios ubicados en la Amazonia noroccidental (Colombia): el Parque Natural Nacional Amacayacu y la Estación Biológica Zafire. Con este objetivo, realicé mediciones de los componentes de la asignación del carbono (biomasa, productividad primaria neta, y su fraccionamiento) a nivel ecosistémico y de la dinámica forestal (tasas anuales de mortalidad y reclutamiento), a lo largo de ocho años (20042012) en seis parcelas permanentes de 1 hectárea establecidas en cinco tipos de bosques sobre suelos diferentes (arcilloso, franco-arcilloso, franco-arcilloso-arenoso, franco-arenoso y arena-francosa). Toda esta información me permitió abordar preguntas específicas que detallo a continuación. En el Capítulo 2 evalúe la hipótesis de que a medida que aumenta la fertilidad del suelo disminuye la cantidad del carbono asignado a la producción subterránea (raíces finas con diámetro <2 mm). Y para esto, realicé mediciones de la masa y la producción de raíces finas usando dos métodos: (1) el de los cilindros de crecimiento y, (2) el de los cilindros de extracción secuencial. El monitoreo se realizó durante 2.2 años en los bosques con suelos más contrastantes: arcilla y arena-francosa. Encontré diferencias significativas en la masa de raíces finas y su producción entre los bosques y, también con respecto a la profundidad del suelo (010 y 1020 cm). El bosque sobre arena-francosa asignó más carbono a las raíces finas que el bosque sobre arcillas. La producción de raíces finas en el bosque sobre arena-francosa fue dos veces más alta (media ± error estándar = 2.98 ± 0.36 y 3.33 ± 0.69 Mg C ha1 año1, con el método 1 y 2, respectivamente), que para el bosque sobre arcillas, el suelo más fértil (1.51 ± 0.14, método 1, y desde 1.03 ± 0.31 a 1.36 ± 0.23 Mg C ha1 año1, método 2). Del mismo modo, el promedio de la masa de raíces finas fue tres veces mayor en el bosque sobre arena-francosa (5.47 ± 0.17 Mg C ha1) que en el suelo más fértil (de 1.52 ± 0.08 a 1.82 ± 0.09 Mg C ha1). La masa de las raíces finas también mostró un patrón temporal relacionado con la lluvia, mostrando que la producción de raíces finas disminuyó sustancialmente en el período seco del año 2005. Estos resultados sugieren que los recursos del suelo pueden desempeñar un papel importante en los patrones de la asignación del carbono entre los componentes aéreo y subterráneo de los bosques tropicales; y que el suelo no sólo influye en las diferencias en la masa de raíces finas y su producción, sino que también, en conjunto con la lluvia, sobre la estacionalidad de la producción. En el Capítulo 3 estimé y analicé los tres componentes de la asignación del carbono a nivel del ecosistema: la biomasa, la productividad primaria neta PPN, y su fraccionamiento, en los mismos bosques del Capítulo 2 (el bosque sobre arcillas y el bosque sobre arena-francosa). Encontré diferencias significativas en los patrones de la asignación del carbono entre los bosques; el bosque sobre arcillas presentó una mayor biomasa total y aérea, así como una PPN, que el bosque sobre arena-francosa. Sin embargo, la diferencia entre los dos bosques en términos de la productividad primaria neta total fue menor en comparación con las diferencias entre la biomasa total de los bosques, como consecuencia de las diferentes estrategias en la asignación del carbono a los componentes aéreo y subterráneo del bosque. La proporción o fracción de la PPN asignada a la nueva producción de follaje fue relativamente similar entre los dos bosques. Nuestros resultados de los incrementos de la biomasa aérea sugieren una posible compensación entre la asignación del carbono al crecimiento de las raíces finas versus el de la madera, a diferencia de la compensación comúnmente asumida entre la parte aérea y la subterránea en general. A pesar de estas diferencias entre los bosques en términos de los componentes de la asignación del carbono, el índice de área foliar fue relativamente similar entre ellos, lo que sugiere que el índice de área foliar es más un indicador de la PPN total que de la asignación de carbono entre componentes. En el Capítulo 4 evalué la variación espacial y temporal de los componentes de la asignación del carbono y la dinámica forestal de cinco tipos e bosques amazónicos y sus respuestas a fluctuaciones en la precipitación, lo cual es completamente relevante en el ciclo global del carbono y los procesos biogeoquímicos en general. Estas variaciones son así mismo importantes para evaluar los efectos de la sequía o eventos extremos sobre la dinámica natural de los bosques amazónicos. Evalué la variación interanual y la estacionalidad de los componentes de la asignación del carbono y la dinámica forestal durante el periodo 2004−2012, en cinco bosques maduros sobre diferentes suelos (arcilloso, franco-arcilloso, franco-arcilloso-arenoso, franco-arenoso y arena-francosa), todos bajo el mismo régimen local de precipitación en la Amazonia noroccidental (Colombia). Quería examinar sí estos bosques responden de forma similar a las fluctuaciones en la precipitación, tal y como pronostican muchos modelos. Consideré las siguientes preguntas: (i) ¿Existe una correlación entre los componentes de la asignación del carbono y la dinámica forestal con la precipitación? (ii) ¿Existe correlación entre los bosques? (iii) ¿Es el índice de área foliar (LAI) un indicador de las variaciones en la producción aérea o es un reflejo de los cambios en los patrones de la asignación del carbono entre bosques?. En general, la correlación entre los componentes aéreo y subterráneo de la asignación del carbono con la precipitación sugiere que los suelos juegan un papel importante en las diferencias espaciales y temporales de las respuestas de estos bosques a las variaciones en la precipitación. Por un lado, la mayoría de los bosques mostraron que los componentes aéreos de la asignación del carbono son susceptibles a las fluctuaciones en la precipitación; sin embargo, el bosque sobre arena-francosa solamente presentó correlación con la lluvia con el componente subterráneo (raíces finas). Por otra parte, a pesar de que el noroeste Amazónico es considerado sin una estación seca propiamente (definida como <100 mm meses −1), la hojarasca y la masa de raíces finas mostraron una alta variabilidad y estacionalidad, especialmente marcada durante la sequía del 2005. Además, los bosques del grupo de suelos francos mostraron que la hojarasca responde a retrasos en la precipitación, al igual que la masa de raíces finas del bosque sobre arena-francosa. En cuanto a la dinámica forestal, sólo la tasa de mortalidad del bosque sobre arena-francosa estuvo correlacionada con la precipitación (ρ = 0.77, P <0.1). La variabilidad interanual en los incrementos en el tallo y la biomasa de los individuos resalta la importancia de la mortalidad en la variación de los incrementos en la biomasa aérea. Sin embargo, las tasas de mortalidad y las proporciones de individuos muertos por categoría de muerte (en pie, caído de raíz, partido y desaparecido), no mostraron tendencias claras relacionadas con la sequía. Curiosamente, la hojarasca, el incremento en la biomasa aérea y las tasas de reclutamiento mostraron una alta correlación entre los bosques, en particular dentro del grupo de los bosques con suelos francos. Sin embargo, el índice de área foliar estimado para los bosques con suelos más contrastantes (arcilla y arena-francosa), no presentó correlación significativa con la lluvia; no obstante, estuvo muy correlacionado entre bosques; índice de área foliar no reflejó las diferencias en la asignación de los componentes del carbono, y su respuesta a la precipitación en estos bosques. Por último, los bosques estudiados muestran que el noroeste amazónico es susceptible a fenómenos climáticos, contrario a lo propuesto anteriormente debido a la ausencia de una estación seca propiamente dicha. ABSTRACT Studies of carbon allocation in forests provide essential information for understanding spatial and temporal differences in carbon cycling that can inform models and predict possible responses to changes in climate. Amazon forests play a particularly significant role in the global carbon balance, but there are still large uncertainties regarding abiotic controls on the rates of net primary production (NPP) and the allocation of photosynthetic products to different ecosystem components; and how the carbon allocation components of Amazon forests respond to extreme climate events. The overall objective of this thesis is to examine the carbon allocation components in old-growth tropical forests on contrasting soils, and under similar climatic conditions in two sites at the Amacayacu National Natural Park and the Zafire Biological Station, located in the north-western Amazon (Colombia). Measurements of above- and below-ground carbon allocation components (biomass, net primary production, and its partitioning) at the ecosystem level, and dynamics of tree mortality and recruitment were done along eight years (20042012) in six 1-ha plots established in five Amazon forest types on different soils (clay, clay-loam, sandy-clay-loam, sandy-loam and loamy-sand) to address specific questions detailed in the next paragraphs. In Chapter 2, I evaluated the hypothesis that as soil fertility increases the amount of carbon allocated to below-ground production (fine-roots) should decrease. To address this hypothesis the standing crop mass and production of fine-roots (<2 mm) were estimated by two methods: (1) ingrowth cores and, (2) sequential soil coring, during 2.2 years in the most contrasting forests: the clay-soil forest and the loamy-sand forest. We found that the standing crop fine-root mass and its production were significantly different between forests and also between soil depths (0–10 and 10–20 cm). The loamysand forest allocated more carbon to fine-roots than the clay-soil forest, with fine-root production in the loamy-sand forest twice (mean ± standard error = 2.98 ± 0.36 and 3.33 ± 0.69 Mg C ha −1 yr −1, method 1 and 2, respectively) as much as for the more fertile claysoil forest (1.51 ± 0.14, method 1, and from 1.03 ± 0.31 to 1.36 ± 0.23 Mg C ha −1 yr −1, method 2). Similarly, the average of standing crop fine-root mass was three times higher in the loamy-sand forest (5.47 ± 0.17 Mg C ha1) than in the more fertile soil (from 1.52 ± 0.08 a 1.82 ± 0.09 Mg C ha1). The standing crop fine-root mass also showed a temporal pattern related to rainfall, with the production of fine-roots decreasing substantially in the dry period of the year 2005. These results suggest that soil resources may play an important role in patterns of carbon allocation of below-ground components, not only driven the differences in the biomass and its production, but also in the time when it is produced. In Chapter 3, I assessed the three components of stand-level carbon allocation (biomass, NPP, and its partitioning) for the same forests evaluated in Chapter 2 (clay-soil forest and loamy-sand forest). We found differences in carbon allocation patterns between these two forests, showing that the forest on clay-soil had a higher aboveground and total biomass as well as a higher above-ground NPP than the loamy-sand forest. However, differences between the two types of forests in terms of stand-level NPP were smaller, as a consequence of different strategies in the carbon allocation of above- and below-ground components. The proportional allocation of NPP to new foliage production was relatively similar between the two forests. Our results of aboveground biomass increments and fine-root production suggest a possible trade-off between carbon allocation to fine-roots versus wood growth (as it has been reported by other authors), as opposed to the most commonly assumed trade-off between total above- and below-ground production. Despite these differences among forests in terms of carbon allocation components, the leaf area index showed differences between forests like total NPP, suggesting that the leaf area index is more indicative of total NPP than carbon allocation. In Chapter 4, I evaluated the spatial and temporal variation of carbon allocation components and forest dynamics of Amazon forests as well as their responses to climatic fluctuations. I evaluated the intra- and inter-annual variation of carbon allocation components and forest dynamics during the period 2004−2012 in five forests on different soils (clay, clay-loam, sandy-clay-loam, sandy-loam and loamy-sand), but growing under the same local precipitation regime in north-western Amazonia (Colombia). We were interested in examining if these forests respond similarly to rainfall fluctuations as many models predict, considering the following questions: (i) Is there a correlation in carbon allocation components and forest dynamics with precipitation? (ii) Is there a correlation among forests? (iii) Are temporal responses in leaf area index (LAI) indicative of variations of above-ground production or a reflection of changes in carbon allocation patterns among forests?. Overall, the correlation of above- and below-ground carbon allocation components with rainfall suggests that soils play an important role in the spatial and temporal differences of responses of these forests to rainfall fluctuations. On the one hand, most forests showed that the above-ground components are susceptible to rainfall fluctuations; however, there was a forest on loamy-sand that only showed a correlation with the below-ground component (fine-roots). On the other hand, despite the fact that north-western Amazonia is considered without a conspicuous dry season (defined as <100 mm month−1), litterfall and fine-root mass showed high seasonality and variability, particularly marked during the drought of 2005. Additionally, forests of the loam-soil group showed that litterfall respond to time-lags in rainfall as well as and the fine-root mass of the loamy-sand forest. With regard to forest dynamics, only the mortality rate of the loamy-sand forest was significantly correlated with rainfall (77%). The observed inter-annual variability of stem and biomass increments of individuals highlighted the importance of the mortality in the above-ground biomass increment. However, mortality rates and death type proportion did not show clear trends related to droughts. Interestingly, litterfall, above-ground biomass increment and recruitment rates of forests showed high correlation among forests, particularly within the loam-soil forests group. Nonetheless, LAI measured in the most contrasting forests (clay-soil and loamysand) was poorly correlated with rainfall but highly correlated between forests; LAI did not reflect the differences in the carbon allocation components, and their response to rainfall on these forests. Finally, the forests studied highlight that north-western Amazon forests are also susceptible to climate fluctuations, contrary to what has been proposed previously due to their lack of a pronounced dry season.

Phytostabilization of metals in mine soils using Brassica juncea in combination with organic amendments

Background and aims The high metal bioavailability and the poor conditions of mine soils yield a low plant biomass, limiting the application of phytoremediation techniques. A greenhouse experiment was performed to evaluate the effects of organic amendments on metal stabilization and the potential of Brassica juncea L. for phytostabilization in mine soils. Methods Plants were grown in pots filled with soils collected from two mine sites located in Central Spain mixed with 0, 30 and 60 tha?1 of pine bark compost and horse- and sheep-manure compost. Plant biomass and metal concentrations in roots and shoots were measured. Metal bioavailability was assessed using a rhizosphere-based method (rhizo), which consists of a mixture of low-molecular-weight organic acids to simulate root exudates. Results Manure reduced metal concentrations in shoots (10?50 % reduction of Cu and 40?80 % of Zn in comparison with non-amended soils), bioconcentration factor (10?50 % of Cu and 40?80 % of Zn) and metal bioavailability in soil (40?50 % of Cu and 10?30 % of Zn) due to the high pH and the contribution of organic matter. Manure improved soil fertility and was also able to increase plant biomass (5?20 times in shoots and 3?30 times in roots), which resulted in a greater amount of metals removed from soil and accumulated in roots (increase of 2?7 times of Cu and Zn). Plants grown in pine bark treatments and in non-amended soils showed a limited biomass and high metal concentrations in shoots. Conclusions The addition of manure could be effective for the stabilization of metals and for enhancing the phytostabilization ability of B. juncea in mine soils. In this study, this species resulted to be a potential candidate for phytostabilization in combination with manure, differing from previous results, in which B. juncea had been recognized as a phytoextraction plant.

Gestión de la fertilidad de suelos y la nutrición de plantaciones de teca (Tectona grandis L.f.) en América Central

La teca (Tectona grandis L.f.) ha sido tradicionalmente considerada como una madera preciosa en los países del SE Asiático, de donde es originaria, pero durante las últimas décadas ha alcanzado especial relevancia en el sector internacional de las maderas tropicales duras de buena calidad. La especie ha sido ampliamente establecida en América Central, donde tiene una gran importancia socioeconómica, tanto por el impacto de las grandes empresas multinacionales que gestionan grandes plantaciones en la región, como por el gran número de pequeños y medianos propietarios que han elegido esta especie para reforestar sus tierras. Pese a la gran importancia de esta especie, se ha desarrollado relativamente poca investigación acerca de su nutrición y de la gestión del suelo necesaria para su establecimiento y mantenimiento en condiciones sostenibles y productivas. En la presente Tesis Doctoral, tras realizar una amplia revisión bibliográfica, se caracterizan los suelos y la nutrición de las plantaciones de teca en América Central y se proponen varias herramientas para la mejora de su gestión. Las plantaciones de teca de América Central presentan habitualmente deficiencias de K y P, además de algunos problemas de acidez ocasionales. Estos se originan, principalmente, por la mala selección de sitio que se realizó en las últimas dos décadas del siglo XX y por el establecimiento de plantaciones de teca por pequeños propietarios en terrenos que no tienen características propicias para la especie. Además, estos problemas comunes relativos a la baja disponibilidad de P y de K en el suelo son causantes de las relativamente bajas concentraciones foliares de estos elementos (0,88±0,07% K y 0,16±0,04% P) encontradas en plantaciones de teca características de la región. Se presentan varios modelos estadísticos que permiten a los gestores: (a) usarlos como referencia para la interpretación de análisis foliares, ya que ofrecen valores que se consideran característicos de plantaciones de teca con un buen estado nutricional; (b) estimar la cantidad de nutrientes acumulados en la biomasa aérea de sus plantaciones y, sobre todo, su extracción a través de la madera en un aprovechamiento forestal, bien sea una clara o la corta final. La gran acumulación de N, P y K en plantaciones de teca ha de ser considerada como un factor fundamental en su gestión. Además, P y K adquieren mayor relevancia aún ya que su extracción del sistema a través de la madera y su escasa disponibilidad en los suelos hacen que se presente un importante desequilibrio que pone en riesgo la sostenibilidad del sistema. En ese sentido, cambiar la época de cosecha, de la actual (en Enero-Mayo) a Septiembre o Diciembre, puede reducir entre un 24 y un 28% la salida de N asociada a la extracción de madera, un 29% la de P y entre un 14 y un 43% la de K. Se estima que la concentración foliar de P es un factor limitante de la productividad de plantaciones de teca en América Central, proponiéndose un nivel crítico de 0,125%. Además, la teca presenta una tolerancia muy baja a suelos salinos, tendencia que no había sido señalada hasta el momento, siendo muy alta la probabilidad de que la plantación tenga un crecimiento lento o muy lento cuando la Saturación de Na es mayor de 1,1%. Por otro lado, se confirma que K es uno de los elementos clave en la nutrición de las plantaciones de teca en la región centroamericana, proponiéndose un nivel crítico provisional de 3,09% para la Saturación de K, por encima del cual es muy probable que la plantación tenga un crecimiento muy alto. Se ha comprobado que las técnicas estadísticas de análisis multivariante pueden ser usadas como herramientas para agrupar los rodales en base a sus similitudes en cuanto a la fertilidad del suelo y mejorar así el diseño de planes de fertilización en plantaciones con una superficie relativamente grande. De esta manera, se pueden ajustar planes de fertilización más eficientes a escala de grupos de rodales, como un primer paso hacia la selvicultura de precisión, intensificando y diversificando la gestión en función de las diferencias edáficas. Finalmente, aunque los análisis foliares y de suelos indiquen la existencia de deficiencias nutricionales, la fertilización de las plantaciones no siempre va a producir efectos positivos sobre su crecimiento si no se diseña adecuadamente teniendo en cuenta varios factores que pueden estar influyendo negativamente en dicha respuesta, como la densidad de las plantaciones (sinergias con la programación de los clareos y claras) y la elección de la dosis y del producto a aplicar (habitualmente dosis bajas de N-P-K en lugar de incluir otros nutrientes como Mg, B y Zn o usar otros productos como micorrizas, biofertilizantes etc…). ABSTRACT Teak (Tectona grandis L.f.) has been traditionally considered as a precious wood in SE Asia, where it is indigenous. However, during recent decades the species has reached worldwide relevance in the tropical high quality hardwood sector. Teak has been widely established in Central America, where it has become a key species in the forest sector due to its socioeconomic impact, either because of the big-scale plantations of transnational companies and the abundant small-scale plantations established by many farmers. Despite the relevance of the species, little research has been carried out regarding its soil fertility and nutrition management, a key issue both for sustainability and productivity. The present Thesis performs a literature review to this respect, characterize the soil fertility and the nutrition of teak plantations of Central America and propose several management tools. Soil deficiencies of K and P are usually found in teak plantations in Central America, in addition to occasional acidity problems. These problems are mainly derived of (a) a poor site selection performed during 80s and 90s; and (b) small-scale plantations by farmers in sites which are not adequate for the species. These common soil fertility problems related with P and K soil availability are probably the cause of the relatively low P and K foliar concentration (0,88±0,07% K y 0,16±0,04% P) found in representative teak plantations of the region. Several statistical models are proposed, which allow forest managers to: (a) use them as a reference for foliar analysis interpretation, as they show values considered as representative for teak plantations with an adequate nutritional status in the region; (b) estimate the amount of nutrients accumulated in the aerial biomass of the plantations and, especially, the amount of them which are extracted from the systems as wood is harvested in thinning or final clearcuts. The accumulation of N, P and K result in a key factor for teak management in the region. This turns out to be especially relevant for the P and K because their high output rate by timber extraction and the low soil availability result in an important unbalance which constitutes a risk regarding the sustainability of the system. To this respect, modifying the harvesting time from the usual right now (January-May, business as usual scenario) to September or December (proposed alternatives) can reduce between 24 and 28% the N output associated to timber extraction, 29% the P output and between 14 and 43% the K. Foliar P concentration is a main limiting factor for teak plantations productivity in Central America and a 0.125% critical level is proposed. In addition, the results show a very low tolerance for soil salinity, tendency which was not previously reported. Hence, the probability of teak plantations to have low or very low Site Index is high when Na Saturation is higher than 1.1%. On the other hand, K is confirmed as one of the key nutrients regarding teak nutrition in Central America and a 3.09% provisional critical level is proposed for K Saturation; when values are above this level the probability of having very high Site Index is high. Multivariate statistical analyses have been successfully tested to be used as tools to group forest stands according to their soil fertility similarities. Hence, more efficient fertilization plans can be designed for each group of stands, intensifying and diversifying nutritional management according to soil fertility differences. This methodology, which is considered as a first step towards precision forestry, is regarded as helpful tool to design fertilization plans in big scale plantations. Finally, even though foliar and soil analysis would point out some nutritional deficiencies in a forest stand, the results show how the fertilization is not always going to have a positive effect over forest growth if it is not adequately designed. Some factors have been identified as determinants of tree response to fertilization: density (synergisms between fertilization and thinning scheduling) and the appropriate selection of dosages and product (usually low dosages are applied and N-P-K is preferred instead of applying other nutrients such as Mg, B or Zn or using other alternatives such as mycorrhizas or biofertilizers).

Influence of Tillage and Liming on N2O emission from a rainfed crop

Nitrous oxide (N2O) is the main greenhouse gas (GHG) produced by agricultural soils due to microbial processes. The application of N fertilizers is associated with an increase of N2O losses. However, it is possible to mitigate these emissions by the introduction of adequate management practices (Snyder et al., 2009). Soil conservation practices (i.e.no tillage, NT) have recently become widespread because they promote several positive effects (increases in soil organic carbonand soil fertility, reduction of soil erosion, etc). In terms of GHG emissions, there is no consensus in the literature on the effects of tillage on N2O. Several studies found that NT can produce greater (Baggs et al., 2003), lower (Malhi et al., 2006) or similar (Grandey et al., 2006) N2O emissions compared to traditional tillage (TT). This large uncertainty is associated with the duration of tillage practices and climatic variability. Liming is widely use to solve problems of soil acidity (Al toxicity, yield penalties, etc). Several studies show a decrease in N2O emissions with liming (Barton et al., 2013) whereas no significant effects or increases were observed in others (Galbally et al., 2010). The aim of this work was to evaluate the effects of tillage (NT vs TT) and liming application or not of Ca-amendment) on N2O emissions from an acid soil during a rainfed crop.

Biological impact on mineral dissolution: Application of the lichen model to understanding mineral weathering in the rhizosphere

Microorganisms modify rates and mechanisms of chemical and physical weathering and clay growth, thus playing fundamental roles in soil and sediment formation. Because processes in soils are inherently complex and difficult to study, we employ a model based on the lichen–mineral system to identify the fundamental interactions. Fixed carbon released by the photosynthetic symbiont stimulates growth of fungi and other microorganisms. These microorganisms directly or indirectly induce mineral disaggregation, hydration, dissolution, and secondary mineral formation. Model polysaccharides were used to investigate direct mediation of mineral surface reactions by extracellular polymers. Polysaccharides can suppress or enhance rates of chemical weathering by up to three orders of magnitude, depending on the pH, mineral surface structure and composition, and organic functional groups. Mg, Mn, Fe, Al, and Si are redistributed into clays that strongly adsorb ions. Microbes contribute to dissolution of insoluble secondary phosphates, possibly via release of organic acids. These reactions significantly impact soil fertility. Below fungi–mineral interfaces, mineral surfaces are exposed to dissolved metabolic byproducts. Through this indirect process, microorganisms can accelerate mineral dissolution, leading to enhanced porosity and permeability and colonization by microbial communities.

Aeolian dust in Colorado Plateau soils: Nutrient inputs and recent change in source

Aeolian dust (windblown silt and clay) is an important component in arid-land ecosystems because it may contribute to soil formation and furnish essential nutrients. Few geologic surfaces, however, have been characterized with respect to dust-accumulation history and resultant nutrient enrichment. We have developed a combination of methods to identify the presence of aeolian dust in arid regions and to evaluate the roles of this dust in ecosystem processes. Unconsolidated sandy sediment on isolated surfaces in the Canyonlands region of the Colorado Plateau differs greatly in mineralogical and chemical composition from associated bedrock, mainly aeolian sandstone. Detrital magnetite in the surficial deposits produces moderately high values of magnetic susceptibility, but magnetite is absent in nearby bedrock. A component of the surficial deposits must be aeolian to account for the abundance of magnetite, which formed originally in far-distant igneous rocks. Particle-size analysis suggests that the aeolian dust component is typically as much as 20–30%. Dust inputs have enriched the sediments in many elements, including P, Mg, Na, K, and Mo, as well as Ca, at sites where bedrock lacks calcite cement. Soil-surface biologic crusts are effective dust traps that apparently record a change in dust sources over the past several decades. Some of the recently fallen dust may result from human disturbance of land surfaces that are far from the Canyonlands, such as the Mojave Desert. Some land-use practices in the study area have the potential to deplete soil fertility by means of wind-erosion removal of aeolian silt.