Tree species community spatial structure in a terra firme Amazon forest, Brazil

All trees with diameter at breast height dbh >= 10.0 cm were stem-mapped in a "terra firme" tropical rainforest in the Brazilian Amazon, at the EMBRAPA Experimental Site, Manaus, Brazil. Specifically, the relationships of tree species with soil properties were determined by using canonical correspondence analyses based on nine soil variables and 68 tree species. From the canonical correspondence analyses, the species were grouped into two groups: one where species occur mainly in sandy sites, presenting low organic matter content; and another one where species occur mainly in dry and clayey sites. Hence, we used Ripley's K function to analyze the distribution of species in 32 plots ranging from 2,500 m(2) to 20,000 m(2) to determine whether each group presents some spatial aggregation as a soil variations result. Significant spatial aggregation for the two groups was found only at over 10,000 m(2) sampling units, particularly for those species found in clayey soils and drier environments, where the sampling units investigated seemed to meet the species requirements. Soil variables, mediated by topographic positions had influenced species spatial aggregation, mainly in an intermediate to large distances varied range (>= 20 m). Based on our findings, we conclude that environmental heterogeneity and 10,000 m(2) minimum sample unit sizes should be considered in forest dynamic studies in order to understand the spatial processes structuring the "terra firme" tropical rainforest in Brazilian Amazon.

Occurrence of Yersinia spp. in food in Brazil

Over the past 9 years, 468 bacterial strains isolated from raw and pasteurized milk, beef and pork, bovine and chicken liver, chicken heart, gizzards and lung sausage, hamburger, cheese and lettuce in different regions of the State of Sao Paulo and in the city of Rio de Janeiro were received by the Reference Laboratory for Yersinia in Brazil. All were confirmed to be Yersinia spp. The 468 Yersinia isolates were grouped as 184 strains because some of the bacteria isolated from the same food sample belonged to the same species, and were considered to be a single strain. The Yersinia food strains were classified as Y. enterocolitica (46), Y. intermedia (67), Y. frederiksenii (20), Y. kristensenii (8) and 43 of them were biochemically atypical. Pathogenic types were not detected.

Structural insights into substrate binding of brown spider venom class II phospholipases D

Phospholipases D (PLDs), the major dermonecrotic factors from brown spider venoms, trigger a range of biological reactions both in vitro and in vivo. Despite their clinical relevance in loxoscelism, structural data is restricted to the apo-form of these enzymes, which has been instrumental in understanding the functional differences between the class I and II spider PLDs. The crystal structures of the native class II PLD from Loxosceles intermedia complexed with myo-inositol 1-phosphate and the inactive mutant H12A complexed with fatty acids indicate the existence of a strong ligand-dependent conformation change of the highly conserved aromatic residues, Tyr 223 and Trp225 indicating their roles in substrate binding. These results provided insights into the structural determinants for substrate recognition and binding by class II PLDs.

The effect of blue light on periodontal biofilm growth in vitro

We have previously shown that blue light eliminates the black-pigmented oral bacteria Porphyromonas gingivalis, Prevotella intermedia, Prevotella nigrescens, and Prevotella melaninogenica. In the present study, the in vitro photosensitivity of the above black-pigmented microorganisms and four Fusobacteria species (Fusobacterium nucleatum ss. nucleatum, F. nucleatum ss. vincentii, F. nucleatum ss. polymorphum, Fusobacterium periodonticum) was investigated in pure cultures and human dental plaque suspensions. We also tested the hypothesis that phototargeting the above eight key periodontopathogens in plaque-derived biofilms in vitro would control growth within the dental biofilm environment. Cultures of the eight bacteria were exposed to blue light at 455 nm with power density of 80 mW/cm(2) and energy fluence of 4.8 J/cm(2). High-performance liquid chromatography (HPLC) analysis of bacteria was performed to demonstrate the presence and amounts of porphyrin molecules within microorganisms. Suspensions of human dental plaque bacteria were also exposed once to blue light at 455 nm with power density of 50 mW/cm(2) and energy fluence of 12 J/cm(2). Microbial biofilms developed from the same plaque were exposed to 455 nm blue light at 50 mW/cm(2) once daily for 4 min (12 J/cm(2)) over a period of 3 days (4 exposures) in order to investigate the cumulative action of phototherapy on the eight photosensitive pathogens as well as on biofilm growth. Bacterial growth was evaluated using the colony-forming unit (CFU) assay. The selective phototargeting of pathogens was studied using whole genomic probes in the checkerboard DNA-DNA format. In cultures, all eight species showed significant growth reduction (p < 0.05). HPLC demonstrated various porphyrin patterns and amounts of porphyrins in bacteria. Following phototherapy, the mean survival fractions were reduced by 28.5 and 48.2 % in plaque suspensions and biofilms, respectively, (p < 0.05). DNA probe analysis showed significant reduction in relative abundances of the eight bacteria as a group in plaque suspensions and biofilms. The cumulative blue light treatment suppressed biofilm growth in vitro. This may introduce a new avenue of prophylactic treatment for periodontal diseases.

Susceptibilidade antimicrobiana ao metronidazole de microrganismos isolados de periodontite crônica e agressiva

The objective of this study was to evaluate the microbial susceptibility to metronidazole from microorganisms isolated from patients with chronic or aggressive periodontitis. The samples were obtained from 50 patients with periodontitis and microorganisms were isolated onto selective and nonselective culture media, identified by biochemical methods and tested for susceptibility to metronidazole. The results evidenced the susceptibility to metronidazole among gram-negative anaerobes and some intermediate susceptibility and resistance among Grampositive anaerobes and facultatives.

Controle de qualidade e obtenção de extratos de espécies vegetais do cerrado brasileiro com potencial etnofarmacológico

ANVISA (National Health Surveillance Agency) has published in recent years, laws that regulate the stages of the control of plants derivatives, including tests of macro and microscopic botanical identification, phytochemical determination, tests of authenticity and purity, microbiological testing, among other parameters. All the analytical procedures of plant drugs control required by law must be based on the Brazilian Pharmacopoeia, other Pharmacopoeias recognized by ANVISA or quality control guides of plant species published by the World Health Organization (WHO). This study aimed to evaluate some pharmacognostic, phytochemical screening and microbiological control of plant species of the Brazilian cerrado, which have indicated ethnopharmacological: Byrsonima intermedia (Bi), Bauhinia holophylla (Bh) and Myrcia bella (Mb). In addition, certain parameters were determined for obtaining extracts from plants sprayed and dried. These data are important to obtain new scientific information from Brazilian plants with therapeutic potential.

Estudo comparativo do uso da terapia fotodinâmica antimicrobiana (aPDT) com uso sistêmico de amoxicilina e metronidazol, no tratamento da periodontite crônica em pacientes fumantes

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

Ilhas de facilitação no Parque Estadual de Porto Ferreira, SP

Novas pesquisas apontam que as interações positivas e o processo de facilitação sobre a comunidade tem fornecido importantes conhecimentos sobre a ecologia de diversas espécies no mundo. Existe uma carência de informações sobre quais as espécies interferem nos mecanismos facilitadores que conduzem a regeneração natural da vegetação e a atual necessidade de identificar estratégias de conservação, manejo sustentável e recuperação ambiental em ambientes tropicais. Este trabalho tem o objetivo de avaliar quais são as espécies arbóreas que facilitam o aumento da riqueza e abundância de outras espécies arbóreas/arbustivas regenerantes sob suas copas numa antiga área de pastagem no Parque Estadual de Porto Ferreira - SP. Foram selecionadas 42 árvores isoladas que foram chamadas de matrizes. Destas matrizes foram feitas 42 parcelas cirulares na qual cada matriz teve duas subparcelas: a Área da Influência (Ai) e a Área do Entorno (Ae), totalizando 84 unidades amostrais. Para cada matriz, nestas unidades amostrais foram incluídos todos os indivíduos arbustivos e arbóreos com altura superior a 1,3 metros de altura. Foram analisadas a florística, fitossociologia e distribuição da abundância das espécies regenerantes. Já para as espécies das matrizes foram analisadas seis diferentes atributos, divididos em dendrométicos e funcionais para entender como elas influênciam a riqueza e abundância das espécies regenerantes. Em Ai e Ae foram indentificados 883 indivíduos distríbuidos em 28 famílias, 49 gêneros, totalizando 64 espécies em uma área total de 3.028 m³. Em Ai foram intentificados 775 inividuos em uma área total de 1.346 m³, com a mesma composição florística citada acima. As espécies Dimorphandra mollis, Qualea grandiflora, Byrsonima intermedia e Aegiphila lhotzkiana são indicadas aqui neste trabalho como as melhores facilitadoras, por serem decíduas e, por possuírem copas amplas...

Ilhas de facilitação no Parque Estadual de Porto Ferreira, SP

Novas pesquisas apontam que as interações positivas e o processo de facilitação sobre a comunidade tem fornecido importantes conhecimentos sobre a ecologia de diversas espécies no mundo. Existe uma carência de informações sobre quais as espécies interferem nos mecanismos facilitadores que conduzem a regeneração natural da vegetação e a atual necessidade de identificar estratégias de conservação, manejo sustentável e recuperação ambiental em ambientes tropicais. Este trabalho tem o objetivo de avaliar quais são as espécies arbóreas que facilitam o aumento da riqueza e abundância de outras espécies arbóreas/arbustivas regenerantes sob suas copas numa antiga área de pastagem no Parque Estadual de Porto Ferreira - SP. Foram selecionadas 42 árvores isoladas que foram chamadas de matrizes. Destas matrizes foram feitas 42 parcelas cirulares na qual cada matriz teve duas subparcelas: a Área da Influência (Ai) e a Área do Entorno (Ae), totalizando 84 unidades amostrais. Para cada matriz, nestas unidades amostrais foram incluídos todos os indivíduos arbustivos e arbóreos com altura superior a 1,3 metros de altura. Foram analisadas a florística, fitossociologia e distribuição da abundância das espécies regenerantes. Já para as espécies das matrizes foram analisadas seis diferentes atributos, divididos em dendrométicos e funcionais para entender como elas influênciam a riqueza e abundância das espécies regenerantes. Em Ai e Ae foram indentificados 883 indivíduos distríbuidos em 28 famílias, 49 gêneros, totalizando 64 espécies em uma área total de 3.028 m³. Em Ai foram intentificados 775 inividuos em uma área total de 1.346 m³, com a mesma composição florística citada acima. As espécies Dimorphandra mollis, Qualea grandiflora, Byrsonima intermedia e Aegiphila lhotzkiana são indicadas aqui neste trabalho como as melhores facilitadoras, por serem decíduas e, por possuírem copas amplas...

BILATERAL ANOMALY IN EVANDROMYIA EVANDROI (DIPTERA: PSYCHODIDAE: PHLEBOTOMINAE) CAPTURED IN VICENCIA MUNICIPALITY, NORTHERN RAINFOREST REGION OF PERNAMBUCO STATE, BRAZIL

Approximately 800 species of phlebotomine sand flies, many of which are vectors of Leishmania, have been described. Besides morphological similarities within groups, the occurrence of anomalies within a species may lead to an erroneous description of new species. This paper describes one phlebotomine sand fly, Evandromyia evandroi, with a symmetrical bilateral anomaly in the number of spines on the gonostyle. In this specimen, the anomalous spine is located in the external region of gonostyle, inserted between the upper external and the lower external spines. It is important to document morphological anomalies, so as to avoid erroneous sand fly identifications.

Longitudinal follow-up of cavum septum pellucidum and adhesio interthalamica alterations in first-episode psychosis: a population-based MRI study

Background. Neurodevelopmental alterations have been described inconsistently in psychosis probably because of lack of standardization among studies. The aim of this study was to conduct the first longitudinal and population-based magnetic resonance imaging (MRI) evaluation of the presence and size of the cavum septum pellucidum (CSP) and adhesio interthalamica (AI) in a large sample of patients with first-episode psychosis (FEP). Method. FEP patients (n=122) were subdivided into schizophrenia (n=62), mood disorders (n=46) and other psychosis (n=14) groups and compared to 94 healthy next-door neighbour controls. After 13 months, 80 FEP patients and 52 controls underwent a second MRI examination. Results. We found significant reductions in the AI length in schizophrenia FEP in comparison with the mood disorders and control subgroups (longer length) at the baseline assessment, and no differences in any measure of the CSP. By contrast, there was a diagnosis x time interaction for the CSP length, with a more prominent increase for this measure in the psychosis group. There was an involution of the AI length over time for all groups but no diagnosis x time interaction. Conclusions. Our findings suggest that the CSP per se may not be linked to the neurobiology of emerging psychotic disorders, although it might be related to the progression of the disease. However, the fact that the AI length was shown to be shorter at the onset of the disorder supports the neurodevelopmental model of schizophrenia and indicates that an alteration in this grey matter junction may be a risk factor for developing psychosis.

Periodontopathogens around the surface of mini-implants removed from orthodontic patients

Objective: To verify if mini-implant mobility is affected by the presence of periodontopathogens, frequently associated with peri-implantitis. Materials and Methods: The surfaces of 31 mini-implants used for skeletal anchorage in orthodontic patients were evaluated. Polymerase chain reaction was used for identification of the presence of DNA from three different periodontopathogens (P. intermedia [Pi], A. actinomycetemcomitans [Aa], and P. gingivalis [Pg]) in 16 mini-implants without mobility (control group) and 15 mini-implants with mobility (experimental group). Results: The results showed that Pi was present in 100% of the samples, from both groups: Aa was found in 31.3% of the control group and in 13.3% of the experimental group. Pg was detected in 37.4% of the control group and in 33.3% of the experimental group. The Fisher exact test and the odds ratio (OR) values for Aa and Pg (OR = 0.34; 95% confidence interval [CI]: 0.05-2.10 and OR = 0.61; 95% Cl: 0.13-2.79, respectively) showed no significant association (P > .05) between the periodontopathogens studied and the mobility of the mini-implants. Conclusions: It can be concluded that the presence of Aa, Pi, and Pg around mini-implants is not associated with mobility. (Angle Orthod. 2012;82:591-595.)

Geographical distribution of American cutaneous leishmaniasis and its phlebotomine vectors (Diptera: Psychodidae) in the state of São Paulo, Brazil

Abstract Background American cutaneous leishmaniasis (ACL) is a re-emerging disease in the state of São Paulo, Brazil. It is important to understand both the vector and disease distribution to help design control strategies. As an initial step in applying geographic information systems (GIS) and remote sensing (RS) tools to map disease-risk, the objectives of the present work were to: (i) produce a single database of species distributions of the sand fly vectors in the state of São Paulo, (ii) create combined distributional maps of both the incidence of ACL and its sand fly vectors, and (iii) thereby provide individual municipalities with a source of reference material for work carried out in their area. Results A database containing 910 individual records of sand fly occurrence in the state of São Paulo, from 37 different sources, was compiled. These records date from between 1943 to 2009, and describe the presence of at least one of the six incriminated or suspected sand fly vector species in 183/645 (28.4%) municipalities. For the remaining 462 (71.6%) municipalities, we were unable to locate records of any of the six incriminated or suspected sand fly vector species (Nyssomyia intermedia, N. neivai, N. whitmani, Pintomyia fischeri, P. pessoai and Migonemyia migonei). The distribution of each of the six incriminated or suspected vector species of ACL in the state of São Paulo were individually mapped and overlaid on the incidence of ACL for the period 1993 to 1995 and 1998 to 2007. Overall, the maps reveal that the six sand fly vector species analyzed have unique and heterogeneous, although often overlapping, distributions. Several sand fly species - Nyssomyia intermedia and N. neivai - are highly localized, while the other sand fly species - N. whitmani, M. migonei, P. fischeri and P. pessoai - are much more broadly distributed. ACL has been reported in 160/183 (87.4%) of the municipalities with records for at least one of the six incriminated or suspected sand fly vector species, while there are no records of any of these sand fly species in 318/478 (66.5%) municipalities with ACL. Conclusions The maps produced in this work provide basic data on the distribution of the six incriminated or suspected sand fly vectors of ACL in the state of São Paulo, and highlight the complex and geographically heterogeneous pattern of ACL transmission in the region. Further studies are required to clarify the role of each of the six suspected sand fly vector species in different regions of the state of São Paulo, especially in the majority of municipalities where ACL is present but sand fly vectors have not yet been identified.

Altered phenotype and function of dendritic cells in individuals with chronic periodontitis

OBJECTIVE: To investigate the effects of periodontal bacterial lysates on maturation and function of mature monocyte-derived dendritic cells (m-MDDCs) derived from individuals with chronic periodontitis (CP) or healthy periodontal tissue (HP). DESIGN: m-MDDCs derived from peripheral blood monocytes, cultured for 7 days in presence of interleukin (IL)-4 and granulocyte-macrophage colony stimulating factor (GM-CSF), were stimulated with lysates of Streptococcus sanguinis, Prevotella intermedia, Porphyromonas gingivalis, or Treponema denticola on day 4, and were then phenotyped. IL-10, IL-12 and IFN-gamma concentration in the supernatant of cultures were measured. RESULTS: Expression of HLA-DR was lower in bacterial-unstimulated mature m-MDDC from CP compared to HP (p=0.04), while expression of CD1a and CD123 were higher in CP. The expression pattern of HLA-DR, CD11c, CD123, and CD1a did not change on bacterial stimulation, regardless of the bacteria. Stimulation with P. intermedia upregulated CD80 and CD86 in CP cells (p≤0.05). Production of IL-12p70 by bacterial-unstimulated m-MDDCs was 5.8-fold greater in CP compared to HP. Bacterial stimulation further increased IL-12p70 production while decreasing IL-10. Significantly more IFN-gamma was produced in co-cultures of CP m-MDDCs than with HP m-MDDCs when cells were stimulated with P. intermedia (p=0.009). CONCLUSIONS: Bacterial-unstimulated m-MDDC from CP exhibited a more immature phenotype but a cytokine profile biased towards proinflammatory response; this pattern was maintained/exacerbated after bacterial stimulation. P. intermedia upregulated co-stimulatory molecules and IFN-gamma expression in CP m-MDDC. These events might contribute to periodontitis pathogenesis

Modelos de circulación global y procesos de mezcla en el océano

La difusividad diapicna en el océano es uno de los parámetros más desconocidos en los modelos climáticos actuales. Su importancia radica en que es uno de los principales factores de transporte de calor hacia capas más profundas del océano. Las medidas de esta difusividad son variables e insuficientes para confeccionar un mapa global con estos valores. A través de una amplia revisión bibliográfica hasta el año 2009 del tema se encontró que el sistema climático es extremadamente sensible a la difusividad diapicna, donde el escalado del Océano Pacífico Sur, con una potencia de su coeficiente de difusividad o kv de 0.63, resultó ser más sensible a los cambios en el coeficiente de difusividad diapicna que el Océano Atlántico con una potencia de kv de 0.44 , se pone de manifiesto así la necesidad de esclarecer los esquemas de mezcla, esquemas de clausura y sus parametrizaciones a través de Modelos de Circulación Global (GCMs) y Modelos de Complejidad Intermedia del Sistema Terrestre (EMICs), dentro del marco de un posible cambio climático y un calentamiento global debido al aumento de las emisiones de gases de efecto invernadero. Así, el objetivo principal de este trabajo es comprender la sensibilidad del sistema climático a la difusividad diapicna en el océano a través de los GCMs y los EMICs. Para esto es necesario el análisis de los posibles esquemas de mezcla diapicna con el objetivo final de encontrar el modelo óptimo que permita predecir la evolución del sistema climático, el estudio de todas las variables que influyen en el mismo, y la correcta simulación en largos periodos de tiempo. The diapycnal diffusivity in the ocean is one of the least known parameters in current climate models. Measurements of this diffusivity are sparse and insufficient for compiling a global map. Through a lengthy review of the literature through 2009 found that the climate system is extremely sensitive to the diapycnal diffusivity, where in the South Pacific scales with the 0.63 power of the diapycnal diffusion, in contrasts to the scales with the 0.44 power of the diapycnal diffusion of North Atlantic. Therefore, the South Pacific is more sensitive than the North Atlantic. All this evidenced the need to clarify the schemes of mixing and its parameterisations through Global Circulation Models (GCMs) and Earth Models of Intermediate Complexity (EMICs) within a context of possible climate change and global warming due to increased of emissions of greenhouse gases. Thus, the main objective of this work understands the sensitivity of the climate system to diapycnal diffusivity in the ocean through the GCMs and EMICs. This requires the analysis of possible schemes of diapycnal mixing with the ultimate goal of finding the optimal model to predict the evolution of the climate system, the study of all variables that affect it and the correct simulation over long periods of time.