Magnetothermal instabilities in magnetized anisotropic plasmas

Using the 16-moment transport equations for an ideal anisotropic collisionless plasma we analyze the influence of pressure anisotropy on the magnetothermal (MTI) and heat-flux-driven buoyancy (HBI) instabilities. We calculate the dispersion relation and the growth rates for these instabilities in the presence of a background heat flux and for configurations with static pressure anisotropy, finding that when the frequency at which heat conduction acts is much larger than any other frequency in the system (i.e. weak magnetic field) the pressure anisotropy has no effect on the MTI/HBI, provided the degree of anisotropy is small. In contrast, when this ordering of timescales does not apply the instability criteria depend on pressure anisotropy.

Semigrupos de operadores lineares e aplicações

Pós-graduação em Matemática Universitária - IGCE

Simulação de perfis nucleares de poço em formações complexas

A identificação e descrição dos caracteres litológicos de uma formação são indispensáveis à avaliação de formações complexas. Com este objetivo, tem sido sistematicamente usada a combinação de ferramentas nucleares em poços não-revestidos. Os perfis resultantes podem ser considerados como a interação entre duas fases distintas: • Fase de transporte da radiação desde a fonte até um ou mais detectores, através da formação. • Fase de detecção, que consiste na coleção da radiação, sua transformação em pulsos de corrente e, finalmente, na distribuição espectral destes pulsos. Visto que a presença do detector não afeta fortemente o resultado do transporte da radiação, cada fase pode ser simulada independentemente uma da outra, o que permite introduzir um novo tipo de modelamento que desacopla as duas fases. Neste trabalho, a resposta final é simulada combinando soluções numéricas do transporte com uma biblioteca de funções resposta do detector, para diferentes energias incidentes e para cada arranjo específico de fontes e detectores. O transporte da radiação é calculado através do algoritmo de elementos finitos (FEM), na forma de fluxo escalar 2½-D, proveniente da solução numérica da aproximação de difusão para multigrupos da equação de transporte de Boltzmann, no espaço de fase, dita aproximação P₁, onde a variável direção é expandida em termos dos polinômios ortogonais de Legendre. Isto determina a redução da dimensionalidade do problema, tornando-o mais compatível com o algoritmo FEM, onde o fluxo dependa exclusivamente da variável espacial e das propriedades físicas da formação. A função resposta do detector NaI(Tl) é obtida independentemente pelo método Monte Carlo (MC) em que a reconstrução da vida de uma partícula dentro do cristal cintilador é feita simulando, interação por interação, a posição, direção e energia das diferentes partículas, com a ajuda de números aleatórios aos quais estão associados leis de probabilidades adequadas. Os possíveis tipos de interação (Rayleigh, Efeito fotoelétrico, Compton e Produção de pares) são determinados similarmente. Completa-se a simulação quando as funções resposta do detector são convolvidas com o fluxo escalar, produzindo como resposta final, o espectro de altura de pulso do sistema modelado. Neste espectro serão selecionados conjuntos de canais denominados janelas de detecção. As taxas de contagens em cada janela apresentam dependências diferenciadas sobre a densidade eletrônica e a fitologia. Isto permite utilizar a combinação dessas janelas na determinação da densidade e do fator de absorção fotoelétrico das formações. De acordo com a metodologia desenvolvida, os perfis, tanto em modelos de camadas espessas quanto finas, puderam ser simulados. O desempenho do método foi testado em formações complexas, principalmente naquelas em que a presença de minerais de argila, feldspato e mica, produziram efeitos consideráveis capazes de perturbar a resposta final das ferramentas. Os resultados mostraram que as formações com densidade entre 1.8 e 4.0 g/cm³ e fatores de absorção fotoelétrico no intervalo de 1.5 a 5 barns/e^-, tiveram seus caracteres físicos e litológicos perfeitamente identificados. As concentrações de Potássio, Urânio e Tório, puderam ser obtidas com a introdução de um novo sistema de calibração, capaz de corrigir os efeitos devidos à influência de altas variâncias e de correlações negativas, observadas principalmente no cálculo das concentrações em massa de Urânio e Potássio. Na simulação da resposta da sonda CNL, utilizando o algoritmo de regressão polinomial de Tittle, foi verificado que, devido à resolução vertical limitada por ela apresentada, as camadas com espessuras inferiores ao espaçamento fonte - detector mais distante tiveram os valores de porosidade aparente medidos erroneamente. Isto deve-se ao fato do algoritmo de Tittle aplicar-se exclusivamente a camadas espessas. Em virtude desse erro, foi desenvolvido um método que leva em conta um fator de contribuição determinado pela área relativa de cada camada dentro da zona de máxima informação. Assim, a porosidade de cada ponto em subsuperfície pôde ser determinada convolvendo estes fatores com os índices de porosidade locais, porém supondo cada camada suficientemente espessa a fim de adequar-se ao algoritmo de Tittle. Por fim, as limitações adicionais impostas pela presença de minerais perturbadores, foram resolvidas supondo a formação como que composta por um mineral base totalmente saturada com água, sendo os componentes restantes considerados perturbações sobre este caso base. Estes resultados permitem calcular perfis sintéticos de poço, que poderão ser utilizados em esquemas de inversão com o objetivo de obter uma avaliação quantitativa mais detalhada de formações complexas.

Estabilidade de métodos numéricos LCR para a simulação de escoamento

Pós-graduação em Matematica Aplicada e Computacional - FCT

Investigation of acceptor dopants in ZrNiSn half-Heusler materials

Thermoelectric generators (TEG) are solid state devices and are able to convert thermal energy directly into electricity and thus could play an important role in waste heat recovery in the near future. Half-Heusler (HH) compounds with the general formula MNiSn (M = Ti, Zr, Hf) built a promising class of materials for these applications because of their high Seebeck coefficients, their environmentally friendliness and their cost advantage over conventional thermoelectric materials.rnrnMuch of the existing literature on HH deals with thermoelectric characterization of n-type MNiSn and p-type MCoSb compounds. Studies on p-type MNiSn-based HHs are far fewer in number. To fabricate high efficient thermoelectric modules based on HH compounds, high performance p-type MNiSn systems need to be developed that are compatible with the existing n-type HH compounds. This thesis explores synthesis strategies for p-type MNiSn based compounds. In particular, the efficacy of transition metals (Sc, La) and main group elements (Al, Ga, In) as acceptor dopants on the Sn-site in ZrNiSn, was investigated by evaluating their thermoelectric performance. The most promising p-type materials could be achieved with transition metal dopants, where the introduction of Sc on the Zr side, yielded the highest Seebeck coefficient in a ternary NiSn-based HH compound up to this date. Hall effect and band gap measurements of this system showed, that the high mobility of minority carrier electrons dominate the transport properties at temperatures above 500 K. It could be shown that this is the reason, why n-type HH are successful TE materials for high temperature applications, and that p-types are subjected to bipolar effects which will lead to diminished thermoelectric efficiencies at high temperatures.rnrnTo complement the experimental investigations on different metal dopants and their influence on the TE properties of HH compounds, numerical solutions to the Boltzmann transport equation were used to predict the optimum carrier concentration where the maximum TE efficiency occurs for p-type HH compounds. The results for p-type samples showed that can not be treated within a simple parabolic band model approach, due to bipolar and multi-band effects.rnrnThe parabolic band model is commonly used for bulk TE materials. It is most accurate when the transport properties are dominated by one single carrier type. Since the transport properties of n-type HH are dominated by only one carrier type (high mobility electrons), it could be shown, that the use of a simple parabolic band model lead to a successful prediction of the optimized carrier concentration and thermoelectric efficiency in n-type HH compounds. rn

Raman spectrum of group IV nanowires: influence of temperature

Group IV semiconductor nanowires are characterized by Raman spectroscopy. The results are analyzed in terms of the heating induced by the laser beam on the nanowires. By solving the heat transport equation one can simulate the temperature reached by the NWs under the exposure to a laser beam. The results are illustrated with Si and Si1-xGex nanowires. Both bundles of nanowires and individual nanowires are studied. The main experimental conditions contributing to the nanowire heating are discussed

Mejora y optimización de un código de simulación hidrodinámico con transporte de radiación para el estudio de sistemas en condiciones de alta densidad de energía

Se presentan las mejoras introducidas en un código de transporte de radiación acoplada a la hidrodinámica llamado ARWEN para el estudio de sistemas en el rango de física de alta densidad de energía (High Energy Density Physics). Los desarrollos introducidos se basan en las siguientes áreas: ít>,~ Ecuaciones de estado: se desarrolla una nueva metodología mediante la cual es posible ajustar los resultados de un modelo simple de ecuaciones de estado como QEOS a datos experimentales y resultados de AIMD. Esta metodología tiene carácter general para poder ser aplicada en gran cantidad de materuales de interés y amplia la flexibilidad de ajuste de los métodos de los que ha partido como base este trabajo. En segundo lugar, se ha desarrollado una librería para la gestión de tablas de datos de ecuaciones de estado que también incluye la gestión de tablas con datos de opacidades y de ionización. Esta nueva librería extiende las capacidades de la anterior al tener llamadas más específicas que aceleran los cálculos, y posibilidad de uso de varias tablas a la vez. Solver de difusión: se ha desarrollado un nuevo paquete para resolver la ecuación de difusión que se aplicará a la conducción de calor dentro del plasma. El método anterior no podía ser ejecutado en paralelo y producía resultados dependientes de la resolución de la malla, mientras que este método es paralelizable y además obtiene una solución con mejor convergencia, lo que supone una solución que no depende del refinamiento del mallado. Revisión del paquete de radiación: en primer lugar se ha realizado una revisión de la implementación del modelo de radiación descubriendo varios errores que han sido depurados. También se ha incluido la nueva librería de gestión de tablas de opacidades que permiten la obtención de las propiedades ópticas del plasma en multigrupos de energía. Por otra parte se ha extendido el cálculo de los coeficientes de transporte al esquema multimaterial que ha introducido David Portillo García en el paquete hidrodinámico del código de simulación. Por último se ha revisado el esquema de resolución del transporte y se ha modificado para hacerlo paralelizable. • Se ha implementado un paquete de trazado de rayos para deposición láser que extiende la utilidad del anterior al ser en 3D y poder utilizar entonces diferentes configuraciones. • Una vez realizadas todas estas tareas se ha aplicado el código ARWEN al estudio de la astrofísica de laboratorio simulando los experimentos llevados a cabo en la instalación PALS por Chantal Stehlé acerca de ondas de choque radiativas. Se han comparado los resultados experimentales frente a las predicciones del código ARWEN obteniéndose una gran concordancia en la velocidad de la onda de choque generada y en las dimensiones del precursor. El código de simulación sobre el que se ha trabajado, junto con los desarrollos aportados por otros investigadores durante la realización de esta tesis, ha permitido participar en colaboraciones con laboratorios de Francia o Japón y se han producido resultados científicos publicados basados en el trabajo descrito en esta tesis. ABSTRACT Improvements in radiation hydrodynamic code ARWEN for the study of systems in the range of physics high energy density (High Energy Density Physics) are presented. The developments introduced are based on the following áreas: • Equations of state: a new methodology was developed to adjust the results of a simple Equation of State model like QEOS to experimental data and results of AIMD. This methodology can be applied to a large amount of materials and it increases the flexibility and range of the previous methods used as basis for this work. Also a new computer library has been developed to manage data tables of thermodynamic properties as well as includes the management of opacity and ionization data tables. This new library extends the capabilities of the previous one with more specific routines, and the possibility of using múltiple tables for several materials. • Diffusion solver: a new package has been developed to solve the diffusion equation applied to the heat conduction of the plasma. The previous method is not parallelizable and it produced mesh dependent results, while this new package can be executed in parallel and achieves a more converged solution that does not depend on the refinement of the mesh. • Radiation package: the check of the radiation model rose several bugs in the implementation that had been removed. The new computer library for EOS managing includes capabilities to store opacity tables for multigroups of energy. Moreover the transport coefficients calculations have been extended for the new multimaterial hydrodynamic package developed by David Portillo García. Also the solving methodology for the transport equation has been modified to make the code run in parallel. • A new ray tracing package has been introduced to extend the previous one to 3D. Once all these tasks has been implemented, the ARWEN code has been applied to study laboratory astrophysics systems. Simulations have been done in order to reproduce the results of the experiments carried out in PALS facility by Chantal Stehlé in radiative shock production. Experimental results are in cióse agreement to the ARWEN estimations of the speed of the shock wave and the length of the precursor. The simulation code used in this thesis, including the work done in ARWEN by other colleagues at the time of this research, allowed the collaboration with other research institution in France and Japan and some of the results presented in this thesis have been published in scientific journals.

Global air-sea flux of CO2: An estimate based on measurements of sea–air pCO2 difference

Approximately 250,000 measurements made for the pCO2 difference between surface water and the marine atmosphere, ΔpCO2, have been assembled for the global oceans. Observations made in the equatorial Pacific during El Nino events have been excluded from the data set. These observations are mapped on the global 4° × 5° grid for a single virtual calendar year (chosen arbitrarily to be 1990) representing a non-El Nino year. Monthly global distributions of ΔpCO2 have been constructed using an interpolation method based on a lateral advection–diffusion transport equation. The net flux of CO2 across the sea surface has been computed using ΔpCO2 distributions and CO2 gas transfer coefficients across sea surface. The annual net uptake flux of CO2 by the global oceans thus estimated ranges from 0.60 to 1.34 Gt-C⋅yr−1 depending on different formulations used for wind speed dependence on the gas transfer coefficient. These estimates are subject to an error of up to 75% resulting from the numerical interpolation method used to estimate the distribution of ΔpCO2 over the global oceans. Temperate and polar oceans of the both hemispheres are the major sinks for atmospheric CO2, whereas the equatorial oceans are the major sources for CO2. The Atlantic Ocean is the most important CO2 sink, providing about 60% of the global ocean uptake, while the Pacific Ocean is neutral because of its equatorial source flux being balanced by the sink flux of the temperate oceans. The Indian and Southern Oceans take up about 20% each.

Método multigrid algébrico: reutilização das estruturas multigrid no transporte de contaminantes

A necessidade de obter solução de grandes sistemas lineares resultantes de processos de discretização de equações diferenciais parciais provenientes da modelagem de diferentes fenômenos físicos conduz à busca de técnicas numéricas escaláveis. Métodos multigrid são classificados como algoritmos escaláveis.Um estimador de erros deve estar associado à solução numérica do problema discreto de modo a propiciar a adequada avaliação da solução obtida pelo processo de aproximação. Nesse contexto, a presente tese caracteriza-se pela proposta de reutilização das estruturas matriciais hierárquicas de operadores de transferência e restrição dos métodos multigrid algébricos para acelerar o tempo de solução dos sistemas lineares associados à equação do transporte de contaminantes em meio poroso saturado. Adicionalmente, caracteriza-se pela implementação das estimativas residuais para os problemas que envolvem dados constantes ou não constantes, os regimes de pequena ou grande advecção e pela proposta de utilização das estimativas residuais associadas ao termo de fonte e à condição inicial para construir procedimentos adaptativos para os dados do problema. O desenvolvimento dos códigos do método de elementos finitos, do estimador residual e dos procedimentos adaptativos foram baseados no projeto FEniCS, utilizando a linguagem de programação PYTHONR e desenvolvidos na plataforma Eclipse. A implementação dos métodos multigrid algébricos com reutilização considera a biblioteca PyAMG. Baseado na reutilização das estruturas hierárquicas, os métodos multigrid com reutilização com parâmetro fixo e automática são propostos, e esses conceitos são estendidos para os métodos iterativos não-estacionários tais como GMRES e BICGSTAB. Os resultados numéricos mostraram que o estimador residual captura o comportamento do erro real da solução numérica, e fornece algoritmos adaptativos para os dados cuja malha retornada produz uma solução numérica similar à uma malha uniforme com mais elementos. Adicionalmente, os métodos com reutilização são mais rápidos que os métodos que não empregam o processo de reutilização de estruturas. Além disso, a eficiência dos métodos com reutilização também pode ser observada na solução do problema auxiliar, o qual é necessário para obtenção das estimativas residuais para o regime de grande advecção. Esses resultados englobam tanto os métodos multigrid algébricos do tipo SA quanto os métodos pré-condicionados por métodos multigrid algébrico SA, e envolvem o transporte de contaminantes em regime de pequena e grande advecção, malhas estruturadas e não estruturadas, problemas bidimensionais, problemas tridimensionais e domínios com diferentes escalas.

Modelling the fate of chromated copper arsenate in a sandy soil

A pulse of chromated copper arsenate (CCA, a timber preservative) was applied in irrigation water to an undisturbed field soil in a laboratory column. Concentrations of various elements in the leachate from the column were measured during the experiment. Also, the remnants within the soil were measured at the end of the experiment. The geochemical modelling package, PHREEQC-2, was used to simulate the experimental data. Processes included in the CCA transport modelling were advection, dispersion, non-specific adsorption (cation exchange) and specific adsorption by clay minerals and organic matter, as well as other possible chemical reactions such as precipitation/dissolution. The modelling effort highlighted the possible complexities in CCA transport and reaction experiments. For example, the uneven dosing of CCA as well as incomplete knowledge of the soil properties resulted in simulations that gave only partial, although reasonable, agreement with the experimental data. Both the experimental data and simulations show that As and Cu are strongly adsorbed and therefore, will mostly remain at the top of the soil profile, with a small proportion appearing in leachate. On the other hand, Cr is more mobile and thus it is present in the soil column leachate. Further simulations show that both the quantity of CCA added to the soil and the pH of the irrigation water will influence CCA transport. Simulations suggest that application of larger doses of CCA to the soil will result in higher leachate concentrations, especially for Cu and As. Irrigation water with a lower pH will dramatically increase leaching of Cu. These results indicate that acidic rainfall or significant accidental spillage of CCA will increase the risk of groundwater pollution.

Gas-liquid-solid flow modelling in a bubble column

An alternative approach to the modelling of solid-liquid and gas-liquid-solid flows for a 5:1 height to width aspect ratio bubble column is presented here. A modified transport equation for the volume fraction of a dispersed phase has been developed for the investigation of turbulent buoyancy driven flows (Chem. Eng. Proc., in press). In this study, a modified transport equation has been employed for discrete phase motion considering both solid-liquid and gas-liquid-solid flows. The modelling of the three-phase flow in a bubble column was achieved in the following case: injecting a slug of solid particles into the column for 10 s at a velocity of 0.1 m s-1 and then the gas phase flow was initiated with a superficial gas velocity of 0.02 cm s-1. © 2003 Elsevier B.V. All rights reserved.

Movement Effects on the Flow Physics and Nutrient Delivery in Engineered Valvular Tissues

Mechanical conditioning has been shown to promote tissue formation in a wide variety of tissue engineering efforts. However the underlying mechanisms by which external mechanical stimuli regulate cells and tissues are not known. This is particularly relevant in the area of heart valve tissue engineering (HVTE) owing to the intense hemodynamic environments that surround native valves. Some studies suggest that oscillatory shear stress (OSS) caused by steady flow and scaffold flexure play a critical role in engineered tissue formation derived from bone marrow derived stem cells (BMSCs). In addition, scaffold flexure may enhance nutrient (e.g. oxygen, glucose) transport. In this study, we computationally quantified the i) magnitude of fluid-induced shear stresses; ii) the extent of temporal fluid oscillations in the flow field using the oscillatory shear index (OSI) parameter, and iii) glucose and oxygen mass transport profiles. Noting that sample cyclic flexure induces a high degree of oscillatory shear stress (OSS), we incorporated moving boundary computational fluid dynamic simulations of samples housed within a bioreactor to consider the effects of: 1) no flow, no flexure (control group), 2) steady flow-alone, 3) cyclic flexure-alone and 4) combined steady flow and cyclic flexure environments. We also coupled a diffusion and convention mass transport equation to the simulated system. We found that the coexistence of both OSS and appreciable shear stress magnitudes, described by the newly introduced parameter OSI-t , explained the high levels of engineered collagen previously observed from combining cyclic flexure and steady flow states. On the other hand, each of these metrics on its own showed no association. This finding suggests that cyclic flexure and steady flow synergistically promote engineered heart valve tissue production via OSS, so long as the oscillations are accompanied by a critical magnitude of shear stress. In addition, our simulations showed that mass transport of glucose and oxygen is enhanced by sample movement at low sample porosities, but did not play a role in highly porous scaffolds. Preliminary in-house in vitro experiments showed that cell proliferation and phenotype is enhanced in OSI-t environments.

First-principles calculation of carrier-phonon scattering in n-type Si1−xGex alloys

First-principles electronic structure methods are used to find the rates of inelastic intravalley and intervalley n-type carrier scattering in Si1-xGex alloys. Scattering parameters for all relevant Delta and L intra- and intervalley scattering are calculated. The short-wavelength acoustic and the optical phonon modes in the alloy are computed using the random mass approximation, with interatomic forces calculated in the virtual crystal approximation using density functional perturbation theory. Optical phonon and intervalley scattering matrix elements are calculated from these modes of the disordered alloy. It is found that alloy disorder has only a small effect on the overall inelastic intervalley scattering rate at room temperature. Intravalley acoustic scattering rates are calculated within the deformation potential approximation. The acoustic deformation potentials are found directly and the range of validity of the deformation potential approximation verified in long-wavelength frozen phonon calculations. Details of the calculation of elastic alloy scattering rates presented in an earlier paper are also given. Elastic alloy disorder scattering is found to dominate over inelastic scattering, except for almost pure silicon (x approximate to 0) or almost pure germanium (x approximate to 1), where acoustic phonon scattering is predominant. The n-type carrier mobility, calculated from the total (elastic plus inelastic) scattering rate, using the Boltzmann transport equation in the relaxation time approximation, is in excellent agreement with experiments on bulk, unstrained alloys..

First-principles calculation of P-type alloy scattering in Si1-xGex

The p-type carrier scattering rate due to alloy disorder in Si1-xGex alloys is obtained from first principles. The required alloy scattering matrix elements are calculated from the energy splitting of the valence bands, which arise when one average host atom is replaced by a Ge or Si atom in supercells containing up to 128 atoms. Alloy scattering within the valence bands is found to be characterized by a single scattering parameter. The hole mobility is calculated from the scattering rate using the Boltzmann transport equation in the relaxation time approximation. The results are in good agreement with experiments on bulk, unstrained alloys..

First-principles calculation of alloy scattering in GexSi1-x

First-principles electronic structure methods are used to find the rates of intravalley and intervalley n-type carrier scattering due to alloy disorder in Si1-xGex alloys. The required alloy scattering matrix elements are calculated from the energy splitting of nearly degenerate Bloch states which arises when one average host atom is replaced by a Ge or Si atom in supercells containing up to 128 atoms. Scattering parameters for all relevant Delta and L intravalley and intervalley alloy scattering are calculated. Atomic relaxation is found to have a substantial effect on the scattering parameters. f-type intervalley scattering between Delta valleys is found to be comparable to other scattering channels. The n-type carrier mobility, calculated from the scattering rate using the Boltzmann transport equation in the relaxation time approximation, is in excellent agreement with experiments on bulk, unstrained alloys.