牛耳草光合作用的脱水保护和复苏机理

本文以复苏植物牛耳草成熟植株的离体叶片为实验材料，以光合作用、蔗糖、抗氧化剂系统和离子渗漏等在脱水复苏过程中的变化为切入点，从生理生化水平上探讨其耐脱水复苏的机制;同时应用mRNA差异显示技术，从分子水平上探讨其耐脱水复苏的机制。 牛耳草叶片光系统II光化学活性参数和叶黄素循环色素在脱水复苏过程中的变化结果表明，极微弱光强（3μmol.m-2.s-1）下，脱水8天的牛耳草叶片诱导了叶黄素循环，叶黄素循环可能介导了牛耳草叶片脱水过程中的光保护作用。 利用不同浓度的磷酸盐溶液处理牛耳草叶片的结果表明，0.1mol/L以上的磷酸盐溶液对牛耳草叶片具有损伤作用，极大的影响了其光系统II的光化学活性，使得牛耳草叶片在脱水后不能很好的复苏。 牛耳草叶片在脱水复苏过程中，抗坏血酸（AsA）、还原型谷胱甘肽（GSH）和蔗糖含量在脱水时很快增加，复苏时又迅速恢复到原来水平，表明它们可能对脱水的牛耳草叶片具有保护作用，但对复苏的牛耳草叶片可能不重要;其离子渗漏情况表明质膜结构的完整性和稳定性在脱水复苏过程中能得到很好的保持，这可能是其耐脱水复苏的重要机制之一。 利用mRNA差异显示技术分离到牛耳草叶片脱水过程中一些脱水和磷酸盐特异诱导表达的cDNA。对其中5个脱水特异诱导表达和3个磷酸盐特异诱导表达的cDNA进行克隆测序、同源性探测和Northern 杂交检测表明，牛耳草脱水过程中诱导表达的基因可能涉及到脱水胁迫的信号转导、调节基因的级联和结构基因产物调节细胞结构在脱水胁迫中的稳定性等。

羊草生殖生物学研究

羊草 (Leymus chinensis (Trin.) Tzvel. ) ，隶属禾本科赖草属，是欧亚大陆草原区东部的重要草原建群种之一。羊草是牧草之王，属于我国有比较优势的战略性生物资源，对我国北方畜牧业发展以及保护生态环境均具有重要作用。 羊草较弱的有性生殖特性限制了其应用，本文从实验生物学角度，研究了羊草有性生殖的基本特点，并试图通过现代分子生物学手段探讨自交不亲和性的有关机理。本论文的主要结果如下： 1. 实验发现羊草具有自交不亲和性。以6 个羊草居群为材料，测定得知开放授粉时的结实率在6.5% - 56.7%之间，自交时结实率为0.6% - 4.3%，差异极其显著; FDA 染色法检测结果显示羊草成熟花药中有活性的花粉达到92.2% 以上;在发育时间顺序和空间结构上，羊草雌蕊、雄蕊适于异花和自花授粉;花粉柱头亲和性实验表明，自交花粉只有5.5%-11.7% 是亲和的，杂交花粉亲和率达到了60.0%-84.8%，说明自交花粉在柱头上萌发受到抑制，其次，荧光显微镜还观察到“不亲和花粉”在进入柱头后生长缓慢，或停止延伸。 2. 初步确定羊草自交不亲和性具有配子体型遗传特点。以不同居群羊草杂交后的姊妹系作为实验材料，观察到自交组合的亲和率变幅为0 % - 6.9 %，杂交组合的亲和率具有连续性变异和变幅较宽的特点（47.5％ - 96.0 %），且正反交结果具有一定的一致性（88.2％），表现出配子体遗传特性。 3. 羊草居群内结实率存在一定变异。以羊草单株为单位分别进行自交、随机互交和开放授粉，结果显示三者的平均结实率分别为4.6%，18.1% 和35.7%，株间的变异系数分别为33.4%，21.2%和17.1%，这些株间的变异均达到统计上的显著差异;同时羊草自交、杂交和开放授粉之间具有一定的相关性，显示羊草的这种株间差异与株系本身的生理特性相关。 4. 分离了羊草硫氧化还原蛋白 H 基因(ThioLc)并对其功能进行了分析。克隆了ThioLc全长和cDNA序列。序列分析结果显示，DNA全长2257 bp，包括3 个内含子和4 个外显子，与水稻Thio h 的cDNA 序列相比，具有 32.0% 的同源性;Southern 杂交显示 ThioLc 在羊草基因组中是单拷贝;Northern 杂交显示 ThioLc 在羊草根、茎、叶和幼小的雌蕊中没有表达, 在成熟雌蕊和幼小的花粉中微量表达, 在成熟花粉中大量表达，说明分离的羊草硫氧化还原蛋白H 基因具有花粉特异表达特点。 5. 原核表达的ThioLc 蛋白具有较高的催化活性。构建了ThioLc 基因的原核表达载体，检测证明ThioLc基因在大肠杆菌中正常表达;提取表达蛋白，纯化，用胰岛素和二硫苏糖醇反应体系进行硫氧化还原蛋白的催化作用反应，结果表明表达的蛋白具有催化活性。这一结果为进一步搜寻靶向蛋白和研究该蛋白的结构、功能和作用方式奠定了基础。

谷子和甘蔗C4型磷酸烯醇式丙酮酸羧化酶基因的克隆及其转基因水稻光合效率的提高

水稻是我国重要的粮食作物之一，它是一种典型的C3植物。与其它C3作物不一样的是，水稻的生长需要相对较高的温度和充足的阳光照射。然而高温和高光强的生长环境更加适合于C4植物的生长，更加有利于发挥C4植物高光合效率的特点。因此本论文希望将C4植物中固定CO2的酶磷酸烯醇式丙酮酸羧化酶基因导入水稻，获得一种更加适合高温和高光强生活环境的“C4型”水稻，这对于提高水稻的产量，满足人口增长对粮食需求具有重大意义。 本论文从C4植物谷子和甘蔗中克隆了其C4型磷酸烯醇式丙酮酸羧化酶cDNA基因，获得了具有自主知识产权的基因克隆，并将它们导入粳稻品种中花8号，进而对转基因材料的光合生理特性进行了研究。结果如下： 首次从谷子中得到了ppc基因两个cDNA克隆，分别命名为Mppc1和Mppc2。前者是一个C3型的ppc基因，它可能属于在根中特异表达的C3-2型ppc基因;后者是在绿色叶片中大量表达的C4型ppc基因。它们所编码的蛋白的氨基酸残基数分别为961和964，序列同源性为82.5%。C4型PEPC多出的3个氨基酸位于N末端。利用RACE的方法我们得到了谷子C4型ppc基因完整的cDNA序列，包括63bp的5'非编码区，2895bp的编码区和256bp的3'非编码区。 首次获得了甘蔗C4型ppc基因完整的cDNA序列的克隆，命名为Sppc。它包括95bp的5'非编码区、2886bp的编码区，和224bp的3'非编码区。 利用所克隆的基因，分别连上强组成型启动子Ubiquitin启动子和强光调控启动子Rubisco小亚基启动子后，再插入两个标记基因不同的表达载体pCB和pPCB的多克隆位点中，构建了八个含有外源ppc基因的植物表达载体pCB-Pubi-Mppc、pCB-Pubi-Sppc、pCB-PrbcS-Mppc、pCB-PrbcS-Sppc、pPCB-Pubi-Mppc、pPCB-Pubi-Sppc、pPCB-PrbcS-Mppc和pPCB-PrbcS-Sppc。再加上含有玉米完整的C4型ppc 核基因的载体pCB-ZMppc，共有9个载体。利用农杆菌介导法进行了水稻的转化，各个载体都获得了大量的转基因植株。对标记基因潮霉素磷酸转移酶基因hpt和磷酸甘露糖异构酶基因pmi以及导入的目的ppc基因的PCR扩增检测，结果显示绝大多数转基因植株都能扩增出目的片段，而未转化的植株则没有扩增产物。对部分转基因水稻的Southern和Western杂交以及RT-PCR分析都表明，无论从DNA水平、mRNA水平，还是从蛋白质水平上都证明外源ppc基因都成功地导入了水稻，并获得了正确的表达。 对各载体转基因植株PEPC活性大规模的测定表明，转入玉米完整C4型PEPC核基因（有内含子）的水稻表现出极大的表达效率，大多数转基因材料的PEPC活性为对照的10-20倍，其活性最高可达到对照的44倍。转入谷子和甘蔗PEPC基因cDNA的水稻，表达的效率很低，多数材料活性增加仅为对照的2-5倍，但也有极少数材料活性增加了10倍以上。用Rubisco小亚基启动子控制的ppc基因在水稻的表达活性要略高于Ubiquitin启动子控制的ppc基因。以上结果说明ppc基因的内含子在其转录或mRNA的稳定上起着重要作用。 对部分转基因材料气体交换特征的研究发现，随着转基因水稻PEPC活性的增加，净光合速率也有逐渐增加的趋势。其中PEPC活性最大的ZM24株系的三个单株净光合速率比对照增加了39.8%、13.7%和28.6%，而它们的PEPC活性比对照分别增加了21.2、21.9和23.6倍。 转PEPC水稻的净光合速率与气孔导度具有显著的相关性。这说明表达的外源ppc 基因产物PEPC参与了转基因水稻的气孔运动，使气孔开放程度增加。更有意义的是过表达PEPC的水稻具有更高的水分利用效率，这就增加了其耐旱能力。在光抑制条件下转基因水稻也具有更高的光合能力。这些特征表明转ppc基因的水稻比对照更加适合于水稻高温高光强和干旱的原生环境。

固氮蓝藻与非固氮蓝藻谷氨酰胺酶的基因克隆、表达及其特性分析

蓝藻是唯一可以进行有氧光合作用的原核生物，是水生食物链主要的初级生产者。氮素是蓝藻细胞必需的大量营养元素之一，揭示蓝藻如何应对环境中氮素的变化、维持自身碳氮平衡的分子机理，对深刻理解蓝藻与环境的相互作用、有效促进或控制蓝藻的生长与繁殖，有重要的理论和实践意义。已有的研究发现，蓝藻细胞的碳氮平衡主要是通过调控氨同化途径中的关键酶类实现。但先前的研究主要集中在固氮蓝藻谷氨酰胺合成酶（GS）-谷氨酸合成酶(GOGAT)循环的特性分析方面，而对催化谷氨酰胺水解生成谷氨酸和氨的主要酶之一谷氨酰胺酶的报道极少，其分子特性及生理学意义尚不明了。因此，本论文以模式固氮蓝藻鱼腥藻7120 和非固氮蓝藻集胞藻6803 为材料，采用分子生物学和生物化学方法，对蓝藻谷氨酰胺酶进行体外研究，并对其生物学功能进行了初步探讨，获得了如下主要结果：1）对体外重组蛋白的酶活性检测发现，两类蓝藻基因组编码的假定性谷氨酰胺酶，均具有谷氨酰胺酶催化活性，表明基因组注释是准确的；2）固氮蓝藻重组酶（All2934、All4774）与非固氮蓝藻重组酶（Slr2079）酶学特征差异显著，具有不同的最适pH、温度及底物亲和力；3）固氮蓝藻重组酶All2934 催化活性受磷酸盐的激活，而非固氮蓝藻重组酶Slr2079 在高Na+浓度下活性更高；4）RT-PCR 分析结果表明，在正常培养条件下，两类蓝藻的谷氨酰胺酶基因在细胞内均有表达；5）在缺氮培养条件下，固氮蓝藻谷氨酰胺酶基因all2934 的表达水平发生明显变化，而all4774 保持相对稳定，表明前者可能在这类细胞应对氮饥饿过程中起重要作用；6）在正常培养条件下，非固氮蓝藻谷氨酰胺酶基因的缺失突变体(Δslr2079)与野生型表型相似，但在盐胁迫条件下，突变体生长速率及光合放氧活性均高于野生型，表明该基因可能在提高非固氮蓝藻细胞高盐耐受力方面起负调控作用。上述重要发现，不仅初步揭示了光合自氧生物谷氨酰胺酶体外重组酶的分子特征，也为进一步研究谷氨酰胺酶在蓝藻细胞内的专一性功能奠定了重要基础。

Novel cathelicidin-derived antimicrobial peptides from Equus asinus

In the present study, EA-CATH1 and EA-CATH2 were identified from a constructed lung cDNA library of donkey (Equus asinus) as members of cathelicidin-derived antimicrobial peptides, using a nested PCR-based cloning strategy. Composed of 25 and 26 residues, respectively, EA-CATH1 and EA-CATH2 are smaller than most other cathelicidins and have no sequence homology to other cathelicidins identified to date. Chemically synthesized EA-CATH1 exerted potent antimicrobial activity against most of the 32 strains of bacteria and fungi tested, especially the clinically isolated drug-resistant strains, and minimal inhibitory concentration values against Gram-positive bacteria were mostly in the range of 0.3-2.4 mu g center dot mL-1. EA-CATH1 showed an extraordinary serum stability and no haemolytic activity against human erythrocytes in a dose up to 20 mu g center dot mL-1. CD spectra showed that EA-CATH1 mainly adopts an alpha-helical conformation in a 50% trifluoroethanol/water solution, but a random coil in aqueous solution. Scanning electron microscope observations of Staphylococcus aureus (ATCC2592) treated with EA-CATH1 demonstrated that EA-CATH could cause rapid disruption of the bacterial membrane, and in turn lead to cell lysis. This might explain the much faster killing kinetics of EA-CATH1 than conventional antibiotics revealed by killing kinetics data. In the presence of CaCl2, EA-CATH1 exerted haemagglutination activity, which might potentiate an inhibition against the bacterial polyprotein interaction with the host erythrocyte surface, thereby possibly restricting bacterial colonization and spread.

Genomic organization and expression analysis of Toll-like receptor 3 in grass carp (Ctenopharyngodon idella)

Toll-like receptor 3 (TLR3) participates in the innate immune response by recognizing viral pathogens. To investigate grass carp immune system responding to GCRV (grass carp reovirus) infection, the full-length cDNA sequence and genomic organization of grass carp TLR3 (CiTLR3) was identified and characterized. The full-length genome sequence of CiTLR3 is composed of 5668 nucleotides, including five exons and four introns. The full-length of CiTLR3 cDNA is 3681 bp in length and encodes a polypeptide of 904 amino acids with an estimated molecular mass of 102,765 Da and a predicted isoelectric point of 8.35. Analysis of the deduced amino acid sequence indicated that CiTLR3 has four main structural domains, including a signal peptide sequence, 14 LRR (leucine-rich repeat) motifs, a transmembrane region and a TIR (Toll/interleukin-1 receptor) domain. It is most similar to the crucian carp (Carassius auratus) TLR3 amino acid sequence with an identity of 99%. Quantitative RT-PCR analysis showed that CiTLR3 transcripts were significantly up-regulated starting at day 1 and continued through day 7 following GCRV infection (P < 0.05). These data implied that CiTLR3 is involved in antiviral defense, provide molecular and functional information for grass carp TLR3, and implicate their role in mediating immune protection against grass carp viral diseases. (C) 2009 Elsevier Ltd. All rights reserved.

Toll-like receptor 4 signaling pathway can be triggered by grass carp reovirus and Aeromonas hydrophila infection in rare minnow Gobiocypris rarus

Toll-like receptor 4 (TLR4) is critical for LPS recognition and cellular responses. It also recognizes some viral envelope proteins. Detection mostly results in the inflammation rather than specific antiviral responses. However, it's unclear in fish. In this report, a TLR4 gene (named as GrTLR4b) was cloned and characterized from rare minnow Gobiocypris rarus. The full length of GrTLR4b cDNA consists of 2766 nucleotides and encodes a polypeptide of 818 amino acids with an estimated molecular mass of 94,518 Da and a predicted isoelectric point of 8.41. The predicted amino acid sequence comprises a signal peptide, six leucine-rich repeat (LRR) motifs, one leucine-rich repeat C-terminal (LRRCT) motif, followed by a transmembrane segment of 23 amino acids, and a cytoplasmic region of 167 amino acids containing one Toll - interleukin 1 - receptor (TIR) motif. It's closely similar to the zebrafish (Danio rerio) TLR4b amino acid sequence with an identity of 77%. Quantitative RT-PCR analysis showed GrTLR4b mRNA was constitutive expression in gill, heart, intestine, kidney, liver, muscle and spleen tissues in healthy animals and up-regulated by viruses and bacteria. After being infected by grass carp reovirus or Aeromonas hydrophila, GrTLR4b expressions were up-regulated from 24 h post-injection and lasted until the fish became moribund (P < 0.05). These data implied that TLR4 signaling pathway could be activated by both viral and bacterial infection in rare minnow. (C) 2009 Elsevier Ltd. All rights reserved.

Enhanced grass carp reovirus resistance of Mx-transgenic rare minnow (Gobiocypris rarus)

In the interferon-induced antiviral mechanisms, the Mx pathway is one of the most powerful. Mx proteins have direct antiviral activity and inhibit a wide range of viruses by blocking an early stage of the viral genome replication cycle. However, antiviral activity of piscine Mx remains unclear in vivo. In the present study, an Mx-like gene was cloned, characterized and gene-transferred in rare minnow Gobiocypris rarus, and its antiviral activity was confirmed in vivo. The full length of the rare minnow Mx-like cDNA is 2241 bp in length and encodes a polypeptide of 625 amino acids with an estimated molecular mass of 70.928 kDa and a predicted isoelectric point of 7.33. Analysis of the deduced amino acid sequence indicated that the mature peptide contains an amino-terminal tripartite GTP-binding motif, a dynamin family signature sequence, a GTPase effector domain and two carboxy-terminal leucine zipper motifs, and is the most similar to the crucian carp (Carassius auratus) Mx3 sequence with an identity of 89%. Both P0 and F1 generations of Mx-transgenic rare minnow demonstrated very significantly high survival rate to GCRV infection (P < 0.01). The mRNA expression of Mx gene was consistent with survival rate in F1 generation. The virus yield was also concurrent with survival time using electron microscope technology. Rare minnow has Mx gene(s) of its own but introducing more Mx gene improves their resistance to GCRV. Mx-transgenic rare minnow might contribute to control the GCRV diseases. (C) 2008 Published by Elsevier Ltd.

Construction and characterization of a Lipotes vexillifer genomic DNA BAC library

We constructed a genomic DNA library for Lipotes vexillifer (L. vexillifer), the Baiji or Yangtze River dolphin, one of the most endangered mammals in the world. The library consists of 149,000 BAC clones, with an average insert size of 83 kb, representing approximately 3.4 haploid genome equivalents. PCR amplification of four known L. vexillifer genes yielded two to four positive clones each. To demonstrate the utility of this library, we isolated and sequenced the L. vexillifer alpha lactalbumin gene, which is a gene specific to mammals and one which has been widely used as molecular tool in phylogenetic analysis. We also end-sequenced 20 randomly selected clones, resulting in the identification of at least five new L. vexilliter genes, five SSR loci, and one SINE locus. These results suggest that this library is a valuable resource for candidate gene cloning, physical mapping, and genome sequencing of this important and threatened species.

Characterization of two membrane-associated protease genes obtained from screening out-membrane protein genes of Flavobacterium columnare G(4)

In order to identify genes encoding the outer membrane proteins (OMPs) of the myxobacter Flavobacterium columnare G(4), the expression library of the bacterium was screened by using rabbit antisera developed against its OMPs. Positive colonies of Escherichia coli M15 containing fragments encoding the bacterial OMPs were selected for cloning the relevant genes by genomic walking methods. Two genes encoding a membrane-associated zinc metalloprotease and prolyl oligopeptidase are reported in this paper. The membrane-associated zinc metalloprotease gene (map) is 1800 bp in length, coding for 449 amino acids (aa). Despite the presence of a conserved motif HEXXH for all metalloproteases, the special HEXXH similar to 32 aa similar to E motif of the F. columnare G(4) Map and its low level of identity with other reported zinc-containing metalloproteases may imply that the membrane-associated zinc metalloprotease of F. columnare G(4) represents a new family of zincins. The gene encoding prolyl oligopeptidase (Pop), a serine proteinase, is 2352 bp in length, coding for 649 aa. Sequence homology analysis revealed that the Pop is also novel as it has <50% identity with other reported prolyl oligopeptidase family proteins. The present study represents the first to employ anti-fish bacterial OMP sera to screen genes of membrane-associated proteases of fish pathogenic bacteria, and to provide necessary information for the examination of the role of the two genes in the infection and pathogenesis of F. columnare.

Genomic organization, nucleotide sequence analysis of the core histone genes cluster in Chlamys farreri and molecular evolution assessment of the H2A and H2B

This work represents the nucleotide sequence of the core histone gene cluster from scallop Chlamys farreri. The tandemly repeated unit of 5671 bp containing a copy of the four core histone genes H4, H2B, H2A and H3 was amplified and identified by the techniques of homology cloning and genomic DNA walking. All the histone genes in the cluster had the structures in their 3' flanking region which related to the evolution of histone gene expression patterns throughout the cell cycle, including two different termination signals, the hairpin structure and at least one AATAAA polyadenylation signal. In their 5' region, the transcription initiation sites with a conserved sequence of 5'-PyATTCPu-3' known as the CAP site were present in all genes except to H2B, generally 37-45 bp upstream of the start code. Canonical TATA and CAAT boxes were identified only in certain histone genes. In the case of the promoters of H2B and H2A genes, there was a 5'-GATCC-3' element, which had been found to be essential to start transcription at the appropriate site. After this element, in the promoter of H2B, there was another sequence, 5'-GGATCGAAACGTTC-3', which was similar to the consensus sequence of 5'-GGAATAAACGTATTC-3' corresponding to the H2B-specific promoter element. The presence of enhancer sequences (5'-TGATATATG-3') was identified from the H4 and H3 genes, matching perfectly with the consensus sequence defined for histone genes. There were several slightly more complex repetitive DNA in the intergene regions. The presence of the series of conserved sequences and reiterated sequences was consistent with the view that mollusc histone gene cluster arose by duplicating of an ancestral precursor histone gene, the birth-and-death evolution model with strong purifying selection enabled the histone cluster less variation and more conserved function. Meanwhile, the H2A and the H2B were demonstrated to be potential good marks for phylogenetic analysis. All the results will be contributed to the characterization of repeating histone gene families in molluscs.

The involvement of HSP22 from bay scallop Argopecten irradians in response to heavy metal stress

Heat shock protein 22 (HSP22) is an important member of small heat shock protein (sHSP) subfamily which plays a key role in the process of protecting cells, facilitating the folding of nascent peptides, and responding to stress. In the present study, the cDNA of HSP22 was cloned from Argopecten irradians (designated as AiHSP22) by rapid amplification cDNA end (RACE) based on the expressed sequence tags (ESTs). The full-length cDNA of AiHSP22 was of 1,112 bp, with an open reading frame of 588 bp encoding a polypeptide of 195 amino acids. The deduced amino acid sequence of AiHSP22 showed high similarity to previously identified HSP22s. The expression patterns of AiHSP22 mRNA in different tissues and in haemocytes of scallops exposed to Cd2+, Pb2+ or Cu2+ were investigated by real-time quantitative RT-PCR. The mRNA of AiHSP22 was constitutively expressed in all examined tissues, including haemocyte, muscle, kidney, gonad, gill and heart. The expression level in heart and muscle was higher than that in other tissues. The mRNA level of AiHSP22 in haemocytes was up-regulated after a 10 days exposure of scallops to Cu2+, Pb2+ and Cd2+. However, the expression of AiHSP22 did not increase linearly along with the rise of heavy metal concentration. Different concentrations of the same metal resulted in different effects on AiHSP22 expression. The sensitive response of AiHSP22 to Cu2+, Pb2+ and Cd2+ stress indicated that it could be developed as an indicator of exposure to heavy metals for the pollution monitoring programs in aquatic environment.

A thioredoxin with antioxidant activity identified from Eriocheir sinensis

Thioredoxin, with a redox-active disulfide/dithiol in the active site, is the major ubiquitous disulfide reductase responsible for maintaining proteins in their reduced state. In the present study, the cDNA encoding thioredoxin-1 (designated EsTrx1) was cloned from Chinese mitten crab Eriocheir sinensis by using rapid amplification of cDNA ends (RACE) approaches. The full-length cDNA of EsTrx1 was of 641 bp, containing a 51 untranslated region (UTR) of 17 bp, a 3' UTR of 306 bp with a poly (A) tail, and an open reading frame (ORF) of 318 bp encoding a polypeptide of 105 amino acids. The high similarity of EsTrx1 with Trx1s from other animals indicated that EsTrx1 should be a new member of the Trx1 sub-family. Quantitative real-time PCR analysis revealed the presence of EsTrx1 transcripts in gill, gonad, hepato-pancreas, muscle, heart and haemocytes. The expression of EsTrx1 mRNA in haemocytes was up-regulated after Listonella anguillarum challenge, reached the maximum level at 6 h post-stimulation, and then dropped back to the original level gradually. In order to elucidate its biological functions, EsTrx1 was recombined and expressed in E. coli BL21 (DE3). The rEsTrx1 was demonstrated to possess the expected redox activity in enzymatic analysis, and to be more potent than GSH in antioxidant capacity. These results together indicated that EsTrx1 could function as an important antioxidant in a physiological context, and perhaps is involved in the responses to bacterial challenge. (C) 2009 Elsevier Ltd. All rights reserved.

Cflec-4, a multidomain C-type lectin involved in immune defense of Zhikong scallop Chlamys farreri

C-type lectins are a superfamily of carbohydrate-recognition proteins which play crucial roles in the innate immunity. In this study, a novel multidomain C-type lectin gene from scallop Chlamys farreri (designated as Cflec-4) was cloned by RACE approach based on EST analysis. The full-length cDNA of Cflec-4 was of 2086 bp. The open reading frame was of 1830 bp and encoded a polypeptide of 609 amino acids, including a signal sequence and four dissimilar carbohydrate-recognition domains (CRDs). The deduced amino acid sequence of CflecA shared high similarities to other C-type lectin family members. The phylogenetic analysis revealed the divergence between the three N-terminal CRDs and the C-terminal one, suggesting that the four CRDs in Cflec-4 originated by repeated duplication of different primordial CRD. The potential tertiary structure of each CRD in Cflec-4 was typical double-loop structure with Ca2+-binding site 2 in the long loop region and two conserved disulfide bridges at the bases of the loops. The tissue distribution of Cflec-4 mRNA was examined by fluorescent quantitative real-time PCR. In the healthy scallops, the Cflec-4 transcripts could be only detected in gonad and hepatopancreas, whereas in the Listonella anguillarum challenged scallops, it could be also detected in hemocytes. These results collectively suggested that CflecA was involved in the immune defense of scallop against pathogen infection and provided new insight into the evolution of C-type lectin superfamily. (C) 2009 Elsevier Ltd. All rights reserved.

Construction and characterization of a bacterial artificial chromosome library of marine macroalga Porphyra yezoensis (Rhodophyta)

A large-DNA-fragment library is necessary for research into the Porphyra genome. In this study, a bacterial artificial chromosome (BAC) library of Porphyra yezoensis was constructed and characterized. The library contains 54,144 BAC clones with an average insert size of about 65 kb and fewer than 0.7% of clones without large inserts. Therefore, its capacity is more than 6.6 P. yezoensis genome equivalents, and the probability of recovering any nuclear DNA sequence from the library is higher than 99%. The library shows good fidelity and stability. A putative trehalose-6-phosphate synthase (TPS) gene was successfully screened out from the library. The above results show that the library is useful for gene cloning and genomic research in P. yezoensis.