海洋放线菌来源的化合物卡拉霉素(kalamycin)的抗肿瘤作用和机制研究

海洋生态环境的特殊性决定了海洋中往往含有结构奇特、新颖的化学物质， 海洋药物具有药理特异性、高活性和多样性，已成为药物研发热点领域，海洋抗肿瘤药物也是其中之一。卡拉霉素（kalamycin）来源于海洋放线菌M097的聚酮类化合物，我们实验室用体外增殖抑制试验发现了卡拉霉素（kalamycin）的抗肿瘤作用。有报道其类似物lactoquinomycin和frenolicin B是肿瘤靶点AKT抑制剂，并由此推断吡喃萘醌骨架在AKT抑制过程中发挥主要作用，我们发现虽然卡拉霉素（kalamycin）含有吡喃萘醌骨架，但是并不抑制AKT及其下游信号系统；继而对卡拉霉素（kalamycin）的体外抗肿瘤作用及其机理进行了系统的分析。 采用磺酰罗丹明B（SRB）法检测卡拉霉素（kalamycin）对10株肿瘤细胞株的体外增殖抑制作用，结果表明，卡拉霉素（kalamycin）能明显抑制各种组织来源的肿瘤细胞生长，具有广泛的细胞增殖抑制作用，除对一株肺癌细胞A549抑制作用不明显外，对9株肿瘤细胞株的IC50平均值为2.5μM，并且对各个细胞株生长抑制曲线形态基本一致。采用流式细胞术证实，卡拉霉素（kalamycin）能剂量依赖地诱导结肠癌细胞HCT-116和肝癌细胞SMMC-7721发生G2/M期周期阻滞，可以诱导黑色素瘤A375细胞发生凋亡。 基于前人的报道，我们用Western blot方法检测卡拉霉素（kalamycin）对AKT信号系统的影响，用量从1μM增加到16μM，AKT、mTOR和磷酸化AKT、mTOR、GSK3β的总量都没有变化；因此我们判断卡拉霉素（kalamycin）不是通过AKT系统发挥作用，而是有另外的机制。细胞凋亡和周期阻滞的很多过程是和P53相关的，我们用卡拉霉素（kalamycin）对P53野生和缺失的HCT-116细胞的增殖抑制和凋亡诱导来分析该抑制作用是否和P53相关，结果显示卡拉霉素（kalamycin）对两种细胞的生长抑制和诱导凋亡作用无明显差异，其作用和P53途径是不相关的。 卡拉霉素（kalamycin）细胞增殖抑制作用的非选择性，表明该化合物是一个广谱的细胞增殖抑制剂。我们用体外酶反应实验分析了卡拉霉素（kalamycin）对拓扑酶的抑制作用，结果显示卡拉霉素（kalamycin）对Topo I没有抑制作用，在20μM时几乎完全抑制Topo II，呈现出显著的浓度依赖效应，抑制作用大约比VP16强十倍。用DNA伸展实验和Topo II 介导的负超螺旋 pBR322 切割实验，证实卡拉霉素（kalamycin）不是DNA嵌入剂和Topo II毒剂，而是一个催化抑制剂。在体外模拟Topo II的催化反应步骤，把整个过程分解，发现卡拉霉素（kalamycin）可以抑制Topo II介导的DNA的切割，但是对再连接没有作用；卡拉霉素（kalamycin）能抑制ATP水解的作用，但是在较高剂量时抑制作用要比阳性对照弱得多。因此，卡拉霉素（kalamycin）可能主要通过抑制Topo II介导的DNA的切割发挥作用。 肿瘤新血管生成是原发性肿瘤赖以发生、生长和转移的物质基础。我们用了多个新生血管生成模型对卡拉霉素（kalamycin）的抗新生血管生成作用进行了检测，发现卡拉霉素（kalamycin） 对内皮细胞管腔形有抑制作用，其作用效果呈现明显的剂量依赖性。卡拉霉素（kalamycin）在对内皮细胞HMEC-1在12小时内的IC50是4.39μM ，在没有显著增殖抑制作用的剂量下，对HMEC-1管腔形成依然具有抑制作用，提示卡拉霉素（kalamycin）的抗新生血管生成作用并非完全来源于其增殖抑制作用。通过体外酶反应、western blot和双荧光素酶报告基因系统分析卡拉霉素（kalamycin）抑制肿瘤新血管生成的信号途径，结果发现这种抑制作用不是依赖于酪氨酸激酶和HIF-lα途径的。 综上所述，卡拉霉素（kalamycin）不是一个AKT抑制剂，它通过专一性的抑制Topo II使肿瘤细胞发生周期阻滞和细胞凋亡，主要抑制Topo II介导的DNA的切割和ATP水解作用。同时卡拉霉素（kalamycin）可以抑制肿瘤血管管腔形成，抑制作用不依赖酪氨酸激酶和HIF-lα途径。

S21 Culture Independent Identification Of Bacterial Communities In The Respiratory Tract Of Patients With Copd, Healthy Non-smokers And Healthy Smokers

Introduction and aims: The role bacteria play in the development and progression of Chronic Obstructive Pulmonary Disease (COPD) is unclear. We used culture-independent methods to describe differences and/or similarities in microbial communities in the lower airways of patients with COPD, healthy non-smokers and smokers.

Methods: Bronchial wash samples were collected from patients with COPD (GOLD 1–3; n = 18), healthy non-smokers (HV; n = 11) and healthy smokers (HS; n = 8). Samples were processed using the Illumina MiSeq platform. The Shannon-Wiener Index (SW) of diversity, lung obstruction (FEV1/FVC ratio) and ordination by Non-Metric Multidimensional Scaling (NMDS) on Bray-Curtis dissimilarity indices were analysed to evaluate how samples were related. Principal component analysis (PCA) was performed to assess the effect specific taxa had within each cohort. Characteristics of each cohort are shown in Table 1.

Results: There was no difference in taxa richness between cohorts (range: 69–71; p = 0.954). Diversity (SW Index) was significantly lower in COPD samples compared to samples from HV and HS (p = 0.009 and p = 0.033, respectively). There was no significant difference between HV and HS (p = 0.186). The FEV1/FVC ratio was significantly lower for COPD compared to HV (p = 9*10–8) and HS (p = 2*10–6), respectively. NMDS analysis showed that communities belonging to either of the healthy groups were more similar to each other than they were to samples belonging to the COPD group. PCA analysis showed that members of Streptococcus sp. and Haemophilus sp. had the largest effect on the variance explained in COPD. In HS, Haemophilus sp., Fusobaterium sp., Actinomyces sp., Prevotella sp. and Veillonella sp. had the largest effect on the variance explained, while in HV Neisseria sp., Porphyromonas sp., Actinomyces sp., Atopobium sp., Prevotella and Veillonella sp. had the largest effect on the variance explained.

Conclusions: The study demonstrates that microbial communities in the lower airways of patients with COPD are significantly different from that seen in healthy comparison groups. Patients with COPD had lower microbial diversity than either of the healthy comparison groups, higher relative abundance of members of Streptococcus sp. and lower relative abundance of a number of key anaerobes.Characteristics

Efeito da combinação de antibióticos e sinvastatina sobre microrganismos de interesse endodôntico e na expressão de marcadores odontoblásticos

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

Distribución del fragmento katN de Nocardia brasiliensis en especies de actinomicetos patógenos

Tesis (Maestría en Ciencias con Especialidad en Mocrobliología Médica) UANL.

Estudios in vivo e in vitro de la sensibilidad de actinomadura madurae frente a diversos antimicrobianos de reciente desarrollo

Tesis (Maestría en Ciencias con Especialidad en Microbiología Médica) UANL

La respuesta de anticuerpos anti-proteínas intracelulares de actinomicetos productores de micetoma en animales infectados o inmunizados

Tesis (Maestría en Ciencias con Especialidad en Inmunología) UANL

Determinación in vitro del efecto de la combinación de amikacina y trimetoprim-sulfametoxazol sobre Nocardia brasiliensis

Tesis (Maestría en Ciencias con Especialidad en Microbiología Médica) U.A.N.L.

Estudio de la inmunogenicidad de las proteasas de Nocardia brasiliensis y su efecto inductor de protección en el micetoma experimental en ratones Balb

Tesis (Doctorado en Ciencias con Especialidad en Inmunología) UANL

Transfer of members of the genus Falcivibrio to the genus Mobiluncus, and emended description of the genus Mobiluncus

It has long been thought that the genera Mobiluncus and Falcivibrio contain the same organisms. Using a polyphasic approach, it was found that Mobiluncus curtisii and Mobiluncus mulieris were the same as Falcivibrio vaginalis and Falcivibrio grandis, respectively. As the genus name Mobiluncus takes precedence, it is proposed that F. vaginalis and F. grandis be transferred to the genus Mobiluncus. In agreement with previous studies, results from phenotypic tests did not support the separation of M. curtisii strains into its two subspecies, M. curtisii subsp. curtisii and M. curtisii subsp. holmesii. Phenotypic complexity within M. curtisii dictates that the species should be treated as a complex until more in-depth analyses of the species have been performed. Phylogenetic analyses, based on 16S rRNA gene sequences, demonstrated that the genus Mobiluncus was associated with Varibaculum cambriense and the two subspecies of Actinomyces neuii, and that A. neuii is only distantly related to Actinomyces sensu stricto.

Actinobaculum urinale sp. nov., from human urine

A hitherto undescribed Actinomyces-like bacterium was isolated from human urine. Based on its biochemical characteristics, the unidentified bacterium did not correspond to any currently described Actinomyces species or related taxa. Comparative 16S rRNA gene sequencing showed that the unknown bacterium exhibits a specific phylogenetic association with the genus Actinobaculum, but a sequence divergence of > 5% from the two currently recognized members of this genus, Actinobaculum schaalii and Actinobaculum suis, demonstrates that it represents a distinct species. Based on both phenotypic and 16S rRNA gene sequence considerations, it is proposed that the unknown bacterium from urine should be classified as a novel species, Actinobaculum urinale sp. nov. The type strain of Actinobaculum urinale is CCUG 46093(T) (= CIP 107424(T)).

Use of denaturing gradient gel electrophoresis to detect Actinobacteria associated with the human faecal microbiota

With the exceptions of the bifidobacteria, propionibacteria and coriobacteria, the Actinobacteria associated with the human gastrointestinal tract have received little attention. This has been due to the seeming absence of these bacteria from most clone libraries. In addition, many of these bacteria have fastidious growth and atmospheric requirements. A recent cultivation-based study has shown that the Actinobacteria of the human gut may be more diverse than previously thought. The aim of this study was to develop a denaturing gradient gel electrophoresis (DGGE) approach for characterizing Actinobacteria present in faecal samples. Amount of DNA added to the Actinobacteria-specific PCR used to generate strong PCR products of equal intenstity from faecal samples of five infants, nine adults and eight elderly adults was anti-correlated with counts of bacteria obtained using fluorescence in situ hybridization probe HGC69A. A nested PCR using Actinobacteria-specific and universal PCR-DGGE primers was used to generate profiles for the Actinobacteria. Cloning of sequences from the DGGE bands confirmed the specificity of the Actinobacteria-specific primers. In addition to members of the genus Bifidobacterium, species belonging to the genera Propionibacterium, Microbacterium, Brevibacterium, Actinomyces and Corynebacterium were found to be part of the faecal microbiota of healthy humans.

Microbiological profile of untreated subjects with localized aggressive periodontitis

Aim The microbial profile of localized aggressive periodontitis (LAgP) has not yet been determined. Therefore, the aim of this study was to evaluate the subgingival microbial composition of LAgP. Material and Methods One hundred and twenty subjects with LAgP (n=15), generalized aggressive periodontitis (GAgP, n=25), chronic periodontitis (ChP, n=30) or periodontal health (PH, n=50) underwent clinical and microbiological assessment. Nine subgingival plaque samples were collected from each subject and analysed for their content of 38 bacterial species using checkerboard DNA-DNA hybridization. Results Red complex and some orange complex species are the most numerous and prevalent periodontal pathogens in LAgP. The proportions of Aggregatibacter actinomycetemcomitans were elevated in shallow and intermediate pockets of LAgP subjects in comparison with those with GAgP or ChP, but not in deep sites. This species also showed a negative correlation with age and with the proportions of red complex pathogens. The host-compatible Actinomyces species were reduced in LAgP. Conclusion A. actinomycetemcomitans seems to be associated with the onset of LAgP, and Porphyromonas gingivalis, Tannerella forsythia, Treponema denticola, Campylobacter gracilis, Eubacterium nodatum and Prevotella intermedia play an important role in disease progression. Successful treatment of LAgP would involve a reduction in these pathogens and an increase in the Actinomyces species.

Microbiota saprófita associada à doença periodontal em cães

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

Detecção de subfertilidade em vacas leiteiras por meio de medidas anatômicas da região pélvica e do aparelho genital

O objetivo deste estudo foi mensurar as regiões que compõem a garupa da vaca leiteira, com aparelho desenvolvido para esse fim, e avaliar o efeito dessas variáveis na contaminação intra-uterina e na eficiência reprodutiva (intervalos parto-primeiro cio e parto-primeira inseminação, número de serviços por concepção e período de serviço). Foram usadas 252 vacas Holandesas, paridas há mais de 30 dias e não inseminadas. Realizaram-se medidas anatômicas da região pélvica e do aparelho genital e cultivo bacteriológico de material uterino. A influência das variáveis independentes (mensurações) sobre a presença de contaminantes intra-uterinos foi analisada por meio de regressão logística, a da presença de contaminantes intra-uterinos sobre a eficiência reprodutiva, por análise de variância, e a das variáveis independentes (mensurações) sobre a eficiência reprodutiva por meio de regressão linear múltipla. A presença de contaminantes intra-uterinos não foi influenciada por nenhuma das variáveis. Staphylococcus sp. (29,6%) foi o microrganismo mais encontrado no material uterino, seguido por Actinomyces pyogenes (26,0%), Streptococcus sp. (22,2%) e coliformes (22,2%), porém essa contaminação não teve efeito negativo nos índices reprodutivos. Das medidas anatômicas avaliadas, as que influenciaram as características reprodutivas foram: abertura do ílio (maior abertura menor eficiência reprodutiva), localização do óstio cranial da cérvice (quanto mais abdominal, piores os índices reprodutivos) e presença de urovagina (influência negativa na taxa de concepção).

Microbiota associated with chronic osteomyelitis of the jaws

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)