Beyond filtered backprojection: a reconstruction software package for ion beam microtomography data

A new version of the TomoRebuild data reduction software package is presented, for the reconstruction of scanning transmission ion microscopy tomography (STIMT) and particle induced X-ray emission tomography (PIXET) images. First, we present a state of the art of the reconstruction codes available for ion beam microtomography. The algorithm proposed here brings several advantages. It is a portable, multi-platform code, designed in C++ with well-separated classes for easier use and evolution. Data reduction is separated in different steps and the intermediate results may be checked if necessary. Although no additional graphic library or numerical tool is required to run the program as a command line, a user friendly interface was designed in Java, as an ImageJ plugin. All experimental and reconstruction parameters may be entered either through this plugin or directly in text format files. A simple standard format is proposed for the input of experimental data. Optional graphic applications using the ROOT interface may be used separately to display and fit energy spectra. Regarding the reconstruction process, the filtered backprojection (FBP) algorithm, already present in the previous version of the code, was optimized so that it is about 10 times as fast. In addition, Maximum Likelihood Expectation Maximization (MLEM) and its accelerated version Ordered Subsets Expectation Maximization (OSEM) algorithms were implemented. A detailed user guide in English is available. A reconstruction example of experimental data from a biological sample is given. It shows the capability of the code to reduce noise in the sinograms and to deal with incomplete data, which puts a new perspective on tomography using low number of projections or limited angle.

Demo paper: tablet-based visualization of transportation data in Madrid using SPARQLStream

In this demo paper we describe an iOS-based application that allows visualizing live bus transport data in Madrid from static and streaming RDF endpoints, reusing the Web services provided by the bus transport authority in the city and wrapping them using SPARQLStream

Guidelines for multilingual linked data

In this article, we argue that there is a growing number of linked datasets in different natural languages, and that there is a need for guidelines and mechanisms to ensure the quality and organic growth of this emerging multilingual data network. However, we have little knowledge regarding the actual state of this data network, its current practices, and the open challenges that it poses. Questions regarding the distribution of natural languages, the links that are established across data in different languages, or how linguistic features are represented, remain mostly unanswered. Addressing these and other language-related issues can help to identify existing problems, propose new mechanisms and guidelines or adapt the ones in use for publishing linked data including language-related features, and, ultimately, provide metrics to evaluate quality aspects. In this article we review, discuss, and extend current guidelines for publishing linked data by focusing on those methods, techniques and tools that can help RDF publishers to cope with language barriers. Whenever possible, we will illustrate and discuss each of these guidelines, methods, and tools on the basis of practical examples that we have encountered in the publication of the datos.bne.es dataset.

Linguistic linked data for sentiment analysis

In this paper we describe the specification of amodel for the semantically interoperable representation of language resources for sentiment analysis. The model integrates "lemon", an RDF-based model for the specification of ontology-lexica (Buitelaar et al. 2009), which is used increasinglyfor the representation of language resources asLinked Data, with Marl, an RDF-based model for the representation of sentiment annotations (West-erski et al., 2011; Sánchez-Rada et al., 2013)

Estudio de las posibilidades de los datos abiertos enlazados (Linked Open Data) para la realización de mashups de ámbito geográfico.

La web ha sufrido una drástica transformación en los últimos años, debido principalmente a su popularización y a la enorme cantidad de información que alberga. Debido a estos factores se ha dado el salto de la denominada Web de Documentos, a la Web Semántica, donde toda la información está relacionada con otra. Las principales ventajas de la información enlazada estriban en la facilidad de reutilización, accesibilidad y disponibilidad para ser encontrada por el usuario. En este trabajo se pretende poner de manifiesto la utilidad de los datos enlazados aplicados al ámbito geográfico y mostrar como pueden ser empleados hoy en día. Para ello se han explotado datos enlazados de carácter espacial provenientes de diferentes fuentes, a través de servidores externos o endpoints SPARQL. Además de eso se ha trabajado con un servidor privado capaz de proporcionar información enlazada almacenada en un equipo personal. La explotación de información enlazada se ha implementado en una aplicación web en lenguaje JavaScript, tratando de abstraer totalmente al usuario del tratamiento de los datos a nivel interno de la aplicación. Esta aplicación cuenta además con algunos módulos y opciones capaces de interactuar con las consultas realizadas a los servidores, consiguiendo un entorno más intuitivo y agradable para el usuario. ABSTRACT: In recent years the web has suffered a drastic transformation because of the popularization and the huge amount of stored information. Due to these factors it has gone from Documents web to Semantic web, where the data are linked. The main advantages of Linked Data lie in the ease of his reuse, accessibility and availability to be located by users. The aim of this research is to highlight the usefulness of the geographic linked data and show how can be used at present time. To get this, the spatial linked data coming from several sources have been managed through external servers or also called endpoints. Besides, it has been worked with a private server able to provide linked data stored in a personal computer. The use of linked data has been implemented in a JavaScript web application, trying completely to abstract the internally data treatment of the application to make the user ignore it. This application has some modules and options that are able to interact with the queries made to the servers, getting a more intuitive and kind environment for users.

Desarrollo de nueva funcionalidad e interfaz web y móvil para la API MappingAPI2

Vivimos en la era de la información y del internet, tenemos la necesidad cada vez mayor de conseguir y compartir la información que existe. Esta necesidad se da en todos los ámbitos existentes pero con más ahínco probablemente sea en el área de la medicina, razón por la cual se llevan a cabo muchas investigaciones de distinta índole, lo cual ha llevado a generar un cantidad inimaginable de información y esta su vez muy heterogénea, haciendo cada vez más difícil unificarla y sacar conocimiento o valor agregado. Por lo cual se han llevado a cabo distintas investigaciones para dar solución a este problema, quizás la más importante y con más crecimiento es la búsqueda a partir de modelos de ontologías mediante el uso de sistemas que puedan consultarla. Este trabajo de Fin de Master hace hincapié es la generación de las consultas para poder acceder a la información que se encuentra de manera distribuida en distintos sitios y de manera heterogénea, mediante el uso de una API que genera el código SPARQL necesario. La API que se uso fue creada por el grupo de informática biomédica. También se buscó una manera eficiente de publicar esta API para su futuro uso en el proyecto p-medicine, por lo cual se creó un servicio RESTful para permitir generar las consultas deseadas desde cualquier plataforma, haciendo en esto caso más accesible y universal. Se le dio también una interfaz WEB a la API que permitiera hacer uso de la misma de una manera más amigable para el usuario. ---ABSTRACT---We live in the age of information and Internet so we have the need to consult and share the info that exists. This need comes is in every scope of our lives, probably one of the more important is the medicine, because it is the knowledge area that treats diseases and it tries to extents the live of the human beings. For that reason there have been many different researches generating huge amounts of heterogeneous and distributed information around the globe and making the data more difficult to consult. Consequently there have been many researches to look for an answer about to solve the problem of searching heterogeneous and distributed data, perhaps the more important if the one that use ontological models. This work is about the generation of the query statement based on the mapping API created by the biomedical informatics group. At the same time the project looks for the best way to publish and make available the API for its use in the p-medicine project, for that reason a RESTful API was made to allow the generation of consults from within the platform, becoming much more accessible and universal available. A Web interface was also made to the API, to let access to the final user in a friendly

Desarrollo de una aplicación Android para administración y gestión de la información de registro de servicios en una plataforma SOA

Este Proyecto Fin de Grado está enmarcado dentro de las actividades del GRyS (Grupo de Redes y Servicios de Próxima Generación) con las Smart Grids. En la investigación actual sobre Smart Grids se pretenden alcanzar los siguientes objetivos: . Integrar fuentes de energías renovables de manera efectiva. . Aumentar la eficiencia en la gestión de la demanda y suministro de forma dinámica. . Reducir las emisiones de CO2 dando prioridad a fuentes de energía verdes. . Concienciar del consumo de energía mediante la monitorización de dispositivos y servicios. . Estimular el desarrollo de un mercado vanguardista de tecnologías energéticamente eficientes con nuevos modelos de negocio. Dentro del contexto de las Smart Grids, el interés del GRyS se extiende básicamente a la creación de middlewares semánticos y tecnologías afines, como las ontologías de servicios y las bases de datos semánticas. El objetivo de este Proyecto Fin de Grado ha sido diseñar y desarrollar una aplicación para dispositivos con sistema operativo Android, que implementa una interfaz gráfica y los métodos necesarios para obtener y representar información de registro de servicios de una plataforma SOA (Service-Oriented Architecture). La aplicación permite: . Representar información relativa a los servicios y dispositivos registrados en una Smart Grid. . Guardar, cargar y compartir por correo electrónico ficheros HTML con la información anterior. . Representar en un mapa la ubicación de los dispositivos. . Representar medidas (voltaje, temperatura, etc.) en tiempo real. . Aplicar filtros por identificador de dispositivo, modelo o fabricante. . Realizar consultas SPARQL a bases de datos semánticas. . Guardar y cagar consultas SPARQL en ficheros de texto almacenados en la tarjeta SD. La aplicación, desarrollada en Java, es de código libre y hace uso de tecnologías estándar y abiertas como HTML, XML, SPARQL y servicios RESTful. Se ha tenido ocasión de probarla con la infraestructura del proyecto europeo e-Gotham (Sustainable-Smart Grid Open System for the Aggregated Control, Monitoring and Management of Energy), en el que participan 17 socios de 5 países: España, Italia, Estonia, Finlandia y Noruega. En esta memoria se detalla el estudio realizado sobre el Estado del arte y las tecnologías utilizadas en el desarrollo del proyecto, la implementación, diseño y arquitectura de la aplicación, así como las pruebas realizadas y los resultados obtenidos. ABSTRACT. This Final Degree Project is framed within the activities of the GRyS (Grupo de Redes y Servicios de Próxima Generación) with the Smart Grids. Current research on Smart Grids aims to achieve the following objectives: . To effectively integrate renewable energy sources. . To increase management efficiency by dynamically matching demand and supply. . To reduce carbon emissions by giving priority to green energy sources. . To raise energy consumption awareness by monitoring products and services. . To stimulate the development of a leading-edge market for energy-efficient technologies with new business models. Within the context of the Smart Grids, the interest of the GRyS basically extends to the creation of semantic middleware and related technologies, such as service ontologies and semantic data bases. The objective of this Final Degree Project has been to design and develop an application for devices with Android operating system, which implements a graphical interface and methods to obtain and represent services registry information in a Service-Oriented Architecture (SOA) platform. The application allows users to: . Represent information related to services and devices registered in a Smart Grid. . Save, load and share HTML files with the above information by email. . Represent the location of devices on a map. . Represent measures (voltage, temperature, etc.) in real time. . Apply filters by device id, model or manufacturer. . SPARQL query semantic database. . Save and load SPARQL queries in text files stored on the SD card. The application, developed in Java, is open source and uses open standards such as HTML, XML, SPARQL and RESTful services technologies. It has been tested in a real environment using the e-Gotham European project infrastructure (Sustainable-Smart Grid Open System for the Aggregated Control, Monitoring and Management of Energy), which is participated by 17 partners from 5 countries: Spain, Italy, Estonia, Finland and Norway. This report details the study on the State of the art and the technologies used in the development of the project, implementation, design and architecture of the application, as well as the tests performed and the results obtained.

Magnificador basado en teléfono móvil: función de magnificación

En este Trabajo fin de Grado se ha creado la parte funcional de una aplicación móvil dejando la parte de la interfaz libre para su futura implementación. La aplicación es un magnificador y está destinada a aquellas personas con baja visión, permitiéndoles hacer aumento de imágenes y textos capturados por la cámara del dispositivo, con la posibilidad de que puedan cambiar algunos parámetros de la magnificación para poderlo ver mejor. La parte funcional de la aplicación fue nombrada como librería magnificador, ya que se compone de métodos implementados en Java que permiten hacer diferentes modificaciones de la imagen o del video visualizado. Se cubrieron todas las fases de desarrollo más significativas de un sistema software: análisis, diseño, implementación y pruebas. La aplicación se desarrolló para Android. Se trabajó en Eclipse con Android SDK. Para el procesamiento de las imágenes se aprovechó una librería externa, OpenCV, para evitar “inventar la rueda”, es decir, no escribir algoritmos de transformación de las imágenes que seguramente no podrían ser tan eficientes como los implementados en dicha librería creada por Intel. ---ABSTRACT---In this Final Project, the functional part of mobile phone application was created, leaving the interface parte for future implementation. The application is a magnifier and is oriented to people with very low vision allowing them to enlarge images of printed documents captured by the camera of the mobile phone device, with the possibility that they can change some parameters of magnification so that it can see better. The functional part of this application was named magnifier library because it composes of methods, implemented in Java, that allows changing between different modes of the preview of the image or video. All of the most significant phases of software development were satisfied: analysis, design, implementation and tests. The application was created for Android. The work was done in Eclipse with Android SDK plugin. For the image processing, an external library, OpenCv, was used, to avoid the unreachable intent of creation of effective algorithms that would never be so potent like the implemented in this library created by Intel.

Estudio de los principales CMS para la creación de una red social

Actualmente las redes sociales son muy utilizadas en todo el mundo, existen diferentes tipos de redes sociales con las que podemos conectar con amigos, ampliar nuestra red de contactos profesionales, aprender cosas nuevas, etc. Su elevado uso las ha convertido en uno de los negocios más rentables en internet generando fortunas para sus creadores, principalmente, a través de la publicidad. Muchas redes sociales son creadas por empresas que cuentan con un equipo experto, pero otras muchas han sido creadas por personas comunes, con bajos conocimientos informáticos, muchos motivados en sus aficiones o carreras profesionales, que al no encontrar nada en la red que les resulte útil, han decidido desarrollar ellos mismos sus propias redes sociales con la ayuda de herramientas informáticas. Una de esas herramientas son los sistemas de gestión de contenidos (CMS), con los cuales ahorraremos mucho tiempo de desarrollo y no necesitaremos invertir grandes cantidades de dinero. Este proyecto trata, principalmente, de cómo crear redes sociales haciendo uso de estas herramientas y tiene el objetivo de ser lo suficientemente claro para que cualquier persona, sin importar su nivel de conocimientos técnicos, sea capaz de desarrollar sus ideas. En la primera parte del proyecto se habla sobre las redes sociales en general y el impacto de éstas en la sociedad actual, donde se ve que, actualmente, debido a la cantidad de redes sociales y a la accesibilidad móvil, el uso de las redes sociales es una cotidianidad. También se explican algunos métodos para obtener beneficios económicos de una red social y las ventajas que presentan las redes sociales específicas frente a las generalistas, concluyendo que las redes sociales específicas van ganando mayor protagonismo con el paso del tiempo. Además, se habla sobre la crítica de las redes sociales desde el punto de vista del usuario de la red, donde se resalta el tema de la administración de la publicidad y la privatización que han supuesto las redes sociales. Posteriormente se presenta una base teórica sobre las herramientas antes mencionadas, los CMS. Se explica su funcionamiento, clasificación y las ventajas que obtenemos con el uso de este software en nuestros proyectos, de los cuales destacan el corto tiempo de desarrollo y el bajo coste. Al final se eligen los CMS de estudio en este proyecto principalmente en base a tres criterios: licencia, cuota de uso y características de red social. En la segunda parte del proyecto se habla acerca de los CMS elegidos: WordPress con su plugin BuddyPress, Elgg, y Joomla con su plugin JomSocial. Se explican las características de cada uno de ellos y se muestran ejemplos de redes sociales reales hechas con estos CMS. En esta parte del proyecto se hace un uso práctico de estos CMS y se detalla paso a paso todo el proceso de creación de una red social (instalación, configuración y personalización de la red social) para cada CMS. El resultado son tres redes sociales hechas con distintos CMS, de los cuales se hace una valoración en base a la experiencia obtenida con el uso de los mismos, concluyéndose que JomSocial es una buena opción para redes sociales de uso generalista, pero para redes específicas son mejores tanto Elgg como BuddyPress, presentando este último una ligera ventaja por tener una gran comunidad en español. ABSTRACT. Nowadays social networks are widely used throughout the world, there are different types of social networks where you can connect with friends, expand your network of professional contacts, learn new things, etc. Its high usage has turned them into one of the most profitable businesses on Internet generating fortunes to its developers, mainly through advertising. Many social networks are developed by companies that count on an expert team, but many others have been created by ordinary people, with low computer skills, many of them motivated in their hobbies or careers, that did not find anything useful on Internet and decide to develop their own social networks with the help of software tools. One of those tools is a content management system (CMS), which will help us to save a lot of development time and we will not need to invest large amounts of money. This project is, mainly, about how to create social networks using these tools and aims to be clear enough to help anyone, regardless of their computer skills, to develop their ideas. The first part of the project is about social networks in general and the impact on today's society, where we can see that, due to the number of social networks and mobile accessibility, the use of social networks is daily. Also it explains some ways to obtain economic benefits from a social network and the advantages of specific social networks against generalist social networks, concluding that specific social networks are gaining more prominence with the passage of time. In addition, it refers on social networks critique from the point of view of social network users, where it highlights the issue of the advertising administration and privatization which have brought social networks. Subsequently, it presents a theoretical base of the above mentioned tools, CMS. Explains their operation, classification and the advantages we get with the use of this software in our projects, where the short development time and lower cost are highlighted. At the end the CMS studied in this project are chosen mainly based on three criteria: license, community size and social network features. The second part of the project is about the chosen CMS: WordPress with its plugin BuddyPress, Elgg, and Joomla with its plugin JomSocial. It explains features of all of them and shows examples of real social networks developed with these CMS. This part of the project is a practical use of these CMS and detailed step by step throughout the process of creating a social network (installation, configuration and customization of the social network) for each CMS. The result are three social networks made with different CMS, from which is made an assessment on the basis of the experience gained with the use of these software, concluding that JomSocial is a good choice to develop generalist social networks, but for specific social networks are better Elgg and BuddyPress, presenting the latter a slight advantage by having a large community in Spanish.

Enabling Language Resources to expose translations as linked data on the web

Language resources, such as multilingual lexica and multilingual electronic dictionaries, contain collections of lexical entries in several languages. Having access to the corresponding explicit or implicit translation relations between such entries might be of great interest for many NLP-based applications. By using Semantic Web-based techniques, translations can be available on the Web to be consumed by other (semantic enabled) resources in a direct manner, not relying on application-specific formats. To that end, in this paper we propose a model for representing translations as linked data, as an extension of the lemon model. Our translation module represents some core information associated to term translations and does not commit to specific views or translation theories. As a proof of concept, we have extracted the translations of the terms contained in Terminesp, a multilingual terminological database, and represented them as linked data. We have made them accessible on the Web both for humans (via a Web interface) and software agents (with a SPARQL endpoint).

Impact of standards in European open data catalogues: a multilingual perspective of DCAT

Within the European Union, member states are setting up official data catalogues as entry points to access PSI (Public Sector Information). In this context, it is important to describe the metadata of these data portals, i.e., of data catalogs, and allow for interoperability among them. To tackle these issues, the Government Linked Data Working Group developed DCAT (Data Catalog Vocabulary), an RDF vocabulary for describing the metadata of data catalogs. This topic report analyzes the current use of the DCAT vocabulary in several European data catalogs and proposes some recommendations to deal with an inconsistent use of the metadata across countries. The enrichment of such metadata vocabularies with multilingual descriptions, as well as an account for cultural divergences, is seen as a necessary step to guarantee interoperability and ensure wider adoption.

Procedimiento para la obtención de un modelo ontológico para representar la información contenida en bases de datos

El presente trabajo propone un procedimiento a través del cual un razonador evalúa la información de una base de datos y la clasifica de forma automática en conceptos, relaciones, roles y atributos. Esta clasificación se desarrolla mediante un procedimiento dividido en dos métodos: primero, un Algoritmo de migración el cual genera una ontología con los elementos del esquema relacional de la base de datos. El segundo método es la Estrategia de clasificación de la información, esta consiste en una serie de consultas SPARQL mediante las que se clasifica la información de la base de datos.---ABSTRACT---This paper proposes a method by which a reasoner evaluates information from a database and automatically classifies in concepts, relationships, roles and attributes. This classification is developed through a procedure divided into two methods: first, a migration algorithm which generates an ontology with elements of relational schema database. The second method is the strategy classification of information, this is a series of SPARQL queries through that classified using the information the database.

morph-LDP: an R2RML-based Linked Data Platform implementation

The W3C Linked Data Platform (LDP) candidate recom- mendation defines a standard HTTP-based protocol for read/write Linked Data. The W3C R2RML recommendation defines a language to map re- lational databases (RDBs) and RDF. This paper presents morph-LDP, a novel system that combines these two W3C standardization initiatives to expose relational data as read/write Linked Data for LDP-aware ap- plications, whilst allowing legacy applications to continue using their relational databases.

Linked Data Rights 2.0: extension of ODRL for Licensing Linked Data

Linked Data assets (RDF triples, graphs, datasets, mappings...) can be object of protection by the intellectual property law, the database law or its access or publication be restricted by other legal reasons (personal data pro- tection, security reasons, etc.). Publishing a rights expression along with the digital asset, allows the rightsholder waiving some or all of the IP and database rights (leaving the work in the public domain), permitting some operations if certain conditions are satisfied (like giving attribution to the author) or simply reminding the audience that some rights are reserved.

A Focused Crawler in order to Get Semantic Web Resources (CSR)

This paper presents a Focused Crawler in order to Get Semantic Web Resources (CSR). Structured data web are available in formats such as Extensible Markup Language (XML), Resource Description Framework (RDF) and Ontology Web Language (OWL) that can be used for processing. One of the main challenges for performing a manual search and download semantic web resources is that this task consumes a lot of time. Our research work propose a focused crawler which allow to download these resources automatically and store them on disk in order to have a collection that will be used for data processing. CRS consists of three layers: (a) The User Interface Layer, (b) The Focus Crawler Layer and (c) The Base Crawler Layer. CSR uses as a selection policie the Shark-Search method. CSR was conducted with two experiments. The first one starts on December 15 2012 at 7:11 am and ends on December 16 2012 at 4:01 were obtained 448,123,537 bytes of data. The CSR ends by itself after to analyze 80,4375 seeds with an unlimited depth. CSR got 16,576 semantic resources files where the 89 % was RDF, the 10 % was XML and the 1% was OWL. The second one was based on the Web Data Commons work of the Research Group Data and Web Science at the University of Mannheim and the Institute AIFB at the Karlsruhe Institute of Technology. This began at 4:46 am of June 2 2013 and 1:37 am June 9 2013. After 162.51 hours of execution the result was 285,279 semantic resources where predominated the XML resources with 99 % and OWL and RDF with 1 % each one.