System Design: UML Class Diagrams

In this session we look at UML Class Diagrams and how they fit into both the family of UML models, and also the software engineering process. We look at some basic features of class diagrams including properties, operations, associations, generalisation, aggregation and composition.

ALPS Workshop 2 p14 Kolb diagram

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"A Sequence in Subdomain 2 of DBL1a of Plasmodium falciparum Erythrocyte Membrane Protein 1 Induces Strain Transcending Antibodies"

Immunity to severe malaria is the first level of immunity acquired to Plasmodium falciparum. Antibodies to the variant antigen PfEMP1 (P. falciparum erythrocyte membrane protein 1) present at the surface of the parasitized red blood cell (pRBC) confer protection by blocking microvascular sequestration. Here we have generated antibodies to peptide sequences of subdomain 2 of PfEMP1-DBL1a previously identified to be associated with severe or mild malaria. A set of sera generated to the amino acid sequence KLQTLTLHQVREYWWALNRKEVWKA, containing the motif ALNRKE, stained the live pRBC. 50% of parasites tested (7/14) were positive both in flow cytometry and immunofluorescence assays with live pRBCs including both laboratory strains and in vitro adapted clinical isolates. Antibodies that reacted selectively with the sequence REYWWALNRKEVWKA in a 15-mer peptide array of DBL1a-domains were also found to react with the pRBC surface. By utilizing a peptide array to map the binding properties of the elicited anti-DBL1a antibodies, the amino acids WxxNRx were found essential for antibody binding. Complementary experiments using 135 degenerate RDSM peptide sequences obtained from 93 Ugandan patient-isolates showed that antibody binding occurred when the amino acids WxLNRKE/D were present in the peptide. The data suggests that the ALNRKE sequence motif, associated with severe malaria, induces strain-transcending antibodies that react with the pRBC surface

A sequence in subdomain 2 of DBL1 alpha of plasmodium falciparum erythrocyte membrane protein 1 induces strain transcending antibodies

Immunity to severe malaria is the first level of immunity acquired to Plasmodium falciparum. Antibodies to the variant antigen PfEMP1 (P. falciparum erythrocyte membrane protein 1) present at the surface of the parasitized red blood cell (pRBC) confer protection by blocking microvascular sequestration. Here we have generated antibodies to peptide sequences of subdomain 2 of PfEMP1-DBL1 alpha previously identified to be associated with severe or mild malaria. A set of sera generated to the amino acid sequence KLQTLTLHQVREYWWALNRKEVWKA, containing the motif ALNRKE, stained the live pRBC. 50% of parasites tested (7/14) were positive both in flow cytometry and immunofluorescence assays with live pRBCs including both laboratory strains and in vitro adapted clinical isolates. Antibodies that reacted selectively with the sequence REYWWALNRKEVWKA in a 15-mer peptide array of DBL1 alpha-domains were also found to react with the pRBC surface. By utilizing a peptide array to map the binding properties of the elicited anti-DBL1 alpha antibodies, the amino acids WxxNRx were found essential for antibody binding. Complementary experiments using 135 degenerate RDSM peptide sequences obtained from 93 Ugandan patient-isolates showed that antibody binding occurred when the amino acids WxLNRKE/D were present in the peptide. The data suggests that the ALNRKE sequence motif, associated with severe malaria, induces strain-transcending antibodies that react with the pRBC surface.

Identification of plasmodium vivax proteins with potential role in invasion using sequence redundancy reduction and profile hidden markov models

Background: This study describes a bioinformatics approach designed to identify Plasmodium vivax proteins potentially involved in reticulocyte invasion. Specifically, different protein training sets were built and tuned based on different biological parameters, such as experimental evidence of secretion and/or involvement in invasion-related processes. A profile-based sequence method supported by hidden Markov models (HMMs) was then used to build classifiers to search for biologically-related proteins. The transcriptional profile of the P. vivax intra-erythrocyte developmental cycle was then screened using these classifiers. Results: A bioinformatics methodology for identifying potentially secreted P. vivax proteins was designed using sequence redundancy reduction and probabilistic profiles. This methodology led to identifying a set of 45 proteins that are potentially secreted during the P. vivax intra-erythrocyte development cycle and could be involved in cell invasion. Thirteen of the 45 proteins have already been described as vaccine candidates; there is experimental evidence of protein expression for 7 of the 32 remaining ones, while no previous studies of expression, function or immunology have been carried out for the additional 25. Conclusions: The results support the idea that probabilistic techniques like profile HMMs improve similarity searches. Also, different adjustments such as sequence redundancy reduction using Pisces or Cd-Hit allowed data clustering based on rational reproducible measurements. This kind of approach for selecting proteins with specific functions is highly important for supporting large-scale analyses that could aid in the identification of genes encoding potential new target antigens for vaccine development and drug design. The present study has led to targeting 32 proteins for further testing regarding their ability to induce protective immune responses against P. vivax malaria.

Modelado de procesos de enseñanza-aprendizaje reutilizables con XML, UML e IMS-LD.

El artículo está incluido en un número monográfico especial con los trabajos del I Simposio Pluridisciplinar sobre Diseño, Evaluación y Descripción de Contenidos Educativos Reutilizables (Guadalajara, Octubre 2004).Resumen tomado de la publicación

Stability lobes diagram identification and surface roughness monitoring in milling processes

La millora de la productivitat i la qualitat són indubtablement dues de les principals exigències del sector productiu modern i factors clau per la competitivitat i la supervivència. Dins aquest sector,la fabricació per arrancada de material juga encara avui en dia un paper protagonista tot i l'aparició de noves tècniques de conformat per addició.Indústries com l'aeronàutica, l'automobilística,la del motlle o l'energètica, depenen en bona part de les prestacions de les màquines-eina. Aquesta Tesi aborda dos aspectes rellevants quan es tracta de millorar de la productivitat i la qualitat del sector productiu: el problema del fimbrament, més conegut per la denominació anglosaxona chatter,i la monitorització de la rugositat superficial en el mecanitzat a alta velocitat.

Gestão e trabalhadores do conhecimento em Tecnologias da informação (UML)

RESUMO: O conhecimento existe desde sempre, mesmo num estado latente condicionado algures e apenas à espera de um meio (de uma oportunidade) de se poder manifestar. O conhecimento é duplamente um fenómeno da consciência: porque dela procede num dado momento da sua vida e da sua história e porque só nela termina, aperfeiçoando-a e enriquecendo-a. O conhecimento está assim em constante mudança. À relativamente pouco tempo começou-se a falar de Gestão do Conhecimento e na altura foi muito associada às Tecnologias da Informação, como meio de colectar, processar e armazenar cada vez mais, maiores quantidades de informação. As Tecnologias da Informação têm tido, desde alguns anos para cá, um papel extremamente importante nas organizações, inicialmente foram adoptadas com o propósito de automatizar os processos operacionais das organizações, que suportam as suas actividades quotidianas e nestes últimos tempos as Tecnologias da Informação dentro das organizações têm evoluído rapidamente. Todo o conhecimento, mesmo até o menos relevante de uma determinada área de negócio, é fundamental para apoiar o processo de tomada de decisão. As organizações para atingirem melhores «performances» e conseguirem transcender as metas a que se propuseram inicialmente, tendem a munir-se de mais e melhores Sistemas de Informação, assim como, à utilização de várias metodologias e tecnologias hoje em dia disponíveis. Por conseguinte, nestes últimos anos, muitas organizações têm vindo a demonstrar uma necessidade crucial de integração de toda a sua informação, a qual está dispersa pelos diversos departamentos constituintes. Para que os gestores de topo (mas também para outros funcionários) possam ter disponível em tempo útil, informação pertinente, verdadeira e fiável dos negócios da organização que eles representam, precisam de ter acesso a bons Sistemas de Tecnologias de Informação. Numa acção de poderem agir mais eficazmente e eficientemente nas tomadas de decisão, por terem conseguido tirar por esses meios o máximo de proveito possível da informação, e assim, apresentarem melhores níveis de sucesso organizacionais. Também, os Sistemas de «Business Intelligence» e as Tecnologias da Informação a ele associadas, utilizam os dados existentes nas organizações para disponibilizar informação relevante para as tomadas de decisão. Mas, para poderem alcançar esses níveis tão satisfatórios, as organizações necessitam de recursos humanos, pois como podem elas serem competitivas sem Luís Miguel Borges – Gestão e Trabalhadores do Conhecimento em Tecnologias da Informação (UML) ULHT – ECATI 6 trabalhadores qualificados. Assim, surge a necessidade das organizações em recrutar os chamados hoje em dia “Trabalhadores do Conhecimento”, que são os indivíduos habilitados para interpretar as informações dentro de um domínio específico. Eles detectam problemas e identificam alternativas, com os seus conhecimentos e discernimento, eles trabalham para solucionar esses problemas, ajudando consideravelmente as organizações que representam. E, usando metodologias e tecnologias da Engenharia do Conhecimento como a modelação, criarem e gerirem um histórico de conhecimento, incluindo conhecimento tácito, sobre várias áreas de negócios da organização, que podem estar explícitos em modelos abstractos, que possam ser compreendidos e interpretados facilmente, por outros trabalhadores com níveis de competência equivalentes. ABSTRACT: Knowledge has always existed, even in a latent state conditioning somewhere and just waiting for a half (an opportunity) to be able to manifest. Knowledge is doubly a phenomenon of consciousness: because proceeds itself at one point in its life and its history and because solely itself ends, perfecting it and enriching it. The knowledge is so in constant change. In the relatively short time that it began to speak of Knowledge Management and at that time was very associated with Information Technologies, as a means to collect, process and store more and more, larger amounts of information. Information Technologies has had, from a few years back, an extremely important role in organizations, were initially adopted in order to automate the operational processes of organizations, that support their daily activities and in recent times Information Technologies within organizations has evolved rapidly. All the knowledge, even to the least relevant to a particular business area, is fundamental to support the process of decision making. The organizations to achieve better performances and to transcend the goals that were initially propose, tend to provide itself with more and better Information Systems, as well as, the use of various methodologies and technologies available today. Consequently, in recent years, many organizations have demonstrated a crucial need for integrating all their information, which is dispersed by the diver constituents departments. For top managers (but also for other employees) may have ready in time, pertinent, truthful and reliable information of the organization they represent, need access to good Information Technology Systems. In an action that they can act more effectively and efficiently in decision making, for having managed to get through these means the maximum possible advantage of the information, and so, present better levels of organizational success. Also, the systems of Business Intelligence and Information Technologies its associated, use existing data on organizations to provide relevant information for decision making. But, in order to achieve these levels as satisfactory, organizations need human resources, because how can they be competitive without skilled workers. Thus, arises the need for organizations to recruit called today “Knowledge Workers”, they are the individuals enable to interpret the information within a specific domain. They detect problems and identify alternatives, with their knowledge and discernment they work to solve these problems, helping considerably the organizations that represent. And, using Luís Miguel Borges – Gestão e Trabalhadores do Conhecimento em Tecnologias da Informação (UML) ULHT – ECATI 8 methodologies and technologies of Knowledge Engineering as modeling, create and manage a history of knowledge, including tacit knowledge, on various business areas of the organization, that can be explicit in the abstract models, that can be understood and interpreted easily, by other workers with equivalent levels of competence.

Scar formation in the inner ear followig acoustical injury: sequence of changes from early signs of damage to healed lesion

This paper is a review of a study to investigate the effects of excessive noise exposure to the organ of Corti using chinchillas.

Twelve sequence stories for use as part of reading curriculum for deaf children

This paper discusses the use of sight vocabulary drills, experience and sequence stories, pre-primers, basal readers and text books as part of a reading curriculum for hearing-impaired children.

A comparison between maximum length sequence and conventional auditory brainstem responses as a screening tool for auditory sensitivity

This paper compares conventional auditory brainstem response tests (ABRs) and Maximum Length Sequence auditory brainstem response tests (MLS ABRs). The results found that the faster MLS ABRs could prove an accurate screening tool for auditory sensitivity.