PICES Press, Vol. 12, No. 1, January 2004

The state of PICES science - 2003 (pdf 281 KB) 2003 Wooster Award (pdf 764 KB) The state of the eastern North Pacific through summer 2003 (pdf 448 KB) The Bering Sea: Current status and recent events (pdf 951 KB) The state of the western North Pacific in the first half of 2003 (pdf 684 KB) The status of oceanic zooplankton in the eastern North Pacific (pdf 390 KB) The precautionary approach to the PDO (pdf 976 KB) Photo highlights of PICES XII (pdf 2.79 MB) William G. Pearcy: Renaissance oceanographer (pdf 2.86 MB) KORDI/PICES/CoML Workshop on "Variability and status of the Yellow Sea and East China Sea ecosystems (pdf 785 KB) PICES/IOC Workshop on "Harmful algal blooms - Harmonization of data" (pdf 330 KB) From physics to predators: Monitoring North Pacific ecosystem dynamics (pdf 270 KB) Toward a coast-wide network of Northeast Pacific coastal-ocean monitoring programs - a brief workshop report (pdf 640) PICES publications (pdf 103 KB) PICES calendar (pdf 45 KB)

Report of the Study Group on “ Fisheries and Ecosystem Response to Recent Regime Shifts”

EXECUTIVE SUMMARY 1. DECADAL-SCALE CLIMATE EVENTS 1.1 Introduction 1.2 Basin-scale Patterns 1.3 Long Time Series in the North Pacific 1.4 Decadal Climate Variability in Ecological Regions of the North Pacific 1.5 Mechanisms 1.6 References 2. COHERENT REGIONAL RESPONSES 2.1 Introduction 2.2 Central North Pacific (CNP) 2.3 California Current System (CCS) 2.4 Gulf of Alaska (GOA) 2.5 Bering Sea and Aleutian Islands 2.6 Western North Pacific (WNP) 2.7 Coherence in Regional Responses to the 1998 Regime Shift 2.8 Climate Indicators for Detecting Regime Shifts 2.9 References 3. IMPLICATIONS FOR THE MANAGEMENT OF MARINE RESOURCES 3.1 Introduction 3.2 Response Time of Biota to Regime Shifts 3.3 Response Time of Management to Regime Shifts 3.4 Provision of Stock Assessment Advice 3.5 Decision Rules 3.6 References 4. SUGGESTED LITERATURE 4.1 Climate Regimes 4.2 Impacts on Lower Trophic Levels 4.3 Impacts on Fish and Higher Trophic Levels 4.4 Impacts on Ecosystems and Possible Mechanisms 4.5 Regimes and Fisheries Management APPENDIX 1: RECENT ECOSYSTEM CHANGES IN THE CENTRAL NORTH PACIFIC A1.1 Introduction A1.2 Physical Oceanography A1.3 Lower Trophic Levels A1.4 Invertebrates A1.5 Fishes A1.6 References APPENDIX 2: RECENT ECOSYSTEM CHANGES IN THE CALIFORNIA CURRENT SYSTEM A2.1 Introduction A2.2 Physical Oceanography A2.3 Lower Trophic Levels A2.4 Invertebrates A2.5 Fishes A2.6 References APPENDIX 3: RECENT ECOSYSTEM CHANGES IN THE GULF OF ALASKA A3.1 Introduction A3.2 Physical Oceanography A3.3 Lower Trophic Levels A3.4 Invertebrates A3.5 Fishes A3.6 Higher Trophic Levels A3.7 Coherence in Gulf of Alaska Fish A3.8 Combined Standardized Indices of Recruitment and Survival Rate A3.9 References APPENDIX 4: RECENT ECOSYSTEM CHANGES IN THE BERING SEA AND ALEUTIAN ISLANDS A4.1 Introduction A4.2 Bering Sea Environmental Variables and Physical Oceanography A4.3 Bering Sea Lower Trophic Levels A4.4 Bering Sea Invertebrates A4.5 Bering Sea Fishes A4.6 Bering Sea Higher Trophic Levels A4.7 Coherence in Bering Sea Fish Responses A4.8 Combined Standardized Indices of Bering Fish Recruitment and Survival Rate A4.9 Aleutian Islands A4.10 References APPENDIX 5: RECENT ECOSYSTEM CHANGES IN THE WESTERN NORTH PACIFIC A5.1 Introduction A5.2 Sea of Okhotsk A5.3 Tsushima Current Region and Kuroshio/Oyashio Current Region A5.4 Bohai Sea, Yellow Sea, and East China Sea A5.5 References (168 page document)

Marine ecosystems of the North Pacific

Key Messages [pdf, 2.5 Mb] Climate Information Gaps Ocean Productivity Information gaps Living Marine Resources Information gaps Climate [pdf, 1.8 Mb] Productivity [pdf, 5.2 Mb] Nutrients Phytoplankton Zooplankton Living Resources [pdf, 10 Mb] Subarctic coastal systems Central oceanic gyres Temperate coastal and oceanic systems Marine mammals The Human Population [pdf, 5 Mb] Contaminants and Habitat Modifications Aquaculture Knowledge Gaps Glossary Ocean and Climate Changes [pdf, 4.1Mb] Highlights Introduction Atmospheric Indices Change in 1998/99 Comparison of Atmospheric Indices Authorship Yellow Sea / East China Sea [pdf, 2.3 Mb] Highlights Background Status and Trends Hydrography Chemistry Plankton Benthos Fish and invertebrates Marine birds and mammals Issues Critical factors causing change Authorship Japan/East Sea [pdf, 3.3 Mb] Highlights Background Status and Trends Hydrography Chemistry Plankton Fish and Invertebrates Marine Birds and Mammals Critical factors causing change Issues Authorship Okhotsk Sea [pdf, 1.7 Mb] Background Status and Trends Climate Hydrography Chemistry Plankton Fish and Invertebrates Marine Birds and Mammals Issues Critical factors causing change Authorship Oyashio / Kuroshio [pdf, 4.5 Mb] Highlights Background Status and Trends Hydrography Plankton Fish and Invertebrates Marine Birds and Mammals Issues Authorship Western Subarctic Gyre [pdf, 4.5 Mb] Highlights Background Status and Trends Hydrography Chemistry Plankton Fish and Invertebrates Marine Birds and Mammals Issues Authorship Bering Sea [pdf, 2.2 Mb] Highlights Background Status and Trends Hydrography Chemistry Plankton Fish and Invertebrates Marine Birds and Mammals Critical Factors Causing Change Issues Authorship Gulf of Alaska [pdf, 2.6 Mb] Highlights Background Status and trends Hydrography Chemistry Plankton Fish and Invertebrates Marine birds and mammals Critical factors causing change Issues Authorship California Current [pdf, 2.7 Mb] Highlights Background Status and Trends Hydrography Chemistry Plankton Fish and Invertebrates Marine Birds and Mammals Critical Factors Causing Change Issues Authorship Gulf of California [pdf, 1.7 Mb] Highlights Background Status and Trends Hydrography Chemistry Plankton Fisheries Marine Birds and Mammals Critical Factors Causing Change Issues Authorship Transition Zone [pdf, 2.5 Mb] Background Status and Trends Hydrography Chemistry Plankton Fish and Invertebrates Marine Birds and Mammals Issues Authorship Tuna [pdf, 1.5 Mb] Highlights Background Pacific bluefin tuna Albacore tuna Status and trends Ecosystem model and climate forcing Authorship Pacific halibut [pdf, 1.1 Mb] Background The Fishery Climate Influences Authorship Pacific salmon [Updated, pdf, 0.4 Mb] Background Status and Trends Washington, Oregon, and California British Columbia Southeast Alaska Central Alaska Western Alaska Russia Japan Authorship References [pdf, 0.5 Mb]

The induced flow field by internal solitary wave and its action on cylindrical piles in the stratified ocean

The induced flow fields by internal solitary waves and its actions on cylindrical piles in density stratified ocean with a basic density profile and a basic velocity profile are investigated. Some results, such as the time evolution of flow fields and hydrodynamic forces on the piles are yielded both by theoretical analysis and numerical calculation for general and specific cases. Several kinds of ambient sea conditions of the South China Sea are specified for numerical simulation. Moreover, the effects of relative density difference, depth ratio and wave steepness on maximal total force and total torque are analyzed.

南海北部沙波运移的观测与理论分析

针对南海北部海域特点建立了模拟该区域小尺度沙波运移过程的准三维力学模型.以多波束海底地貌扫描数据和水文资料为基础,预测了研究区域沙波的运移,其结果在沙脊脊沟处与实际观测一致,而在脊背上与实际观测值存在差异.分析表明,本文所提出的物理模型可以用于预测南海海域以推移质泥沙运动为主的小尺度沙波运移规律.这一结果对该区域海底管线等工程设计是很有意义的.

Studies on the mouth size of fish larvae. Method and conclusions only [Translation from: Bulletin of the Japanese Society of Scientific Fisheries 36, 353-368, 1970]

This study was conducted to look into the relationship between mouth size and the total length of larval fish, and the growth in total length of larval fish in one or within a one-year period. Study material was gathered in the South China Sea, the Bay of Bangkok and the Vietnamese coast. This translation focuses on methods and conclusions of the original (longer) paper.

Length-weight relationship of Gulf of Thailand fishes

The length-weight relationship of 26 fish species belonging to 17 families obtained from the Gulf of Thailand was examined. As seven species were obtained from different survey periods and three were from two different locations, seasonal and geographic variations of the equation between body weight W and total length L, W = aL super(b), were examined. The b values of the 27 species were tested for their significant differences from the value of 3; this confirmed that a few species showed significant differences of b value from 3. It is suggested that the 'cube law (b = 3)' can be applied to the length-weight relationship of most fishes in the Gulf of Thailand, with a few exceptions. This was confirmed by the analysis of b values from 72 additional species from the South China Sea area.

3.0～2.0Ma B. P.南海南部深海沉积物孢粉记录及其对全球变化的响应

为了重建东亚季风区域2.5MaB.P.前后植被和气候变化的历史，更好地了解低纬度地区植被变化及其对全球变化的响应，本研究选择了南海南部ODP1143站深海沉积物中的孢粉样品进行研究。通过高分辨率（7ka）的孢粉样品的分析研究，建立起3.0～2.0MaB.P.时段南海深海沉积孢粉组合序列，系统建立了这一时段植被演替序列。在此基础上，重点研究了2.5MaB.P.前后气候变化在南海周边地区植被演替中的响应，为探索和揭示东亚古季风及古环境演变提供了孢粉学依据。 ODP 1143站位于南沙海区，北纬9º22´，东经113º17´，深海柱状样采于水深2772m的大陆坡。本研究以生物地层学和氧同位素年代学为依据建立了年龄框架，对1143站135～95m（3.0～2.6 Ma B. P.）深海沉积中的孢粉样品进行了分析，建立了3.0～2.0MaB.P.时段南海深海沉积孢粉组合序列。孢粉样品处理方法主要是用盐酸去掉钙质和氢氟酸浸泡溶解硅质后，再用筛子将样品在超声波发生器中震荡过滤。孢粉的鉴定和统计在光学透视显微镜下完成。研究结果表明： 1、孢粉谱的主要特征是沉积率变化显著。与3.0～2.6 Ma B. P. 相比，2.6～2.0 Ma B. P.各类型花粉及孢子沉积率均有显著提高。该结果表明2.6 Ma B. P.南海海平面有显著下降，可与北半球冰盖形成、东亚季风增强相对应。 2、2.6 Ma B. P.以来，各类型孢粉沉积率变化与深海氧同位素分期相对应，代表了多次冰期-间冰期旋回。该结果表明南海海平面曾有多次上升和下降。 3、频谱分析结果表明，3.0～2.0 Ma B. P.存在0.1 Ma（偏心率）和46.9ka（斜率）的周期。

冲绳海槽北部PC-1岩芯24 cal.kaBP 以来孢粉记录的古环境信息

东海陆架是世界上最宽阔的陆架之一，面积达770 000 km2左右。在末次冰盛期（LGM），东海海平面下降120～130 m左右，绝大部分陆架暴露出海面。而冲绳海槽是第四纪以来一直保持海洋环境的东海深海区。本文以冲绳海槽北部PC-1岩芯为材料，通过分析该孔的孢粉，加上详细的AMS 14C测年，恢复了周边地区24 cal.kaBP以来的古植被，并推测古环境和古气候变化，重点讨论了LGM时期出露大陆架上发育的植被。 PC-1孔（31°27.5′N，128°24.8′E）位于黑潮支流对马暖流东侧，水深590 m，柱长812 cm。孢粉分析按间隔8 cm取样，个别为4~6 cm，共分析了103个孢粉样品。利用9个AMS 14C数据建立年龄标尺，用Calib5.1.0软件进行年龄校正。通过相邻样品深度的线性内插获得每个样品的年龄，采用外延法得到顶部和底部的校正年龄分别为351cal aBP、24 280 cal aBP，孢粉样品的时间分辨率平均为230 a。 根据孢粉百分比和沉积率的变化，可划分出四个带：Ⅰ带（812～715 cm，24.2～21.1 cal. kaBP）、Ⅱ带（715～451 cm，21.1～15.2 cal. kaBP）、Ⅲ带（451～251 cm，15.2～10.8 cal. kaBP）、Ⅳ带（251～0 cm，10.8～0.3 cal. kaBP），分别对应MIS 3末期、末次冰盛期、冰消期和全新世。末次冰盛期草本植物花粉占优势，孢粉沉积率较高，此时草本花粉主要来源于出露的大陆架，其上发育了以蒿属为主的草地植被，气候比较寒冷干燥；冰消期海平面开始回升，松属花粉含量升高，草本植物花粉含量下降；全新世以木本植物花粉占绝对优势，栗属－栲属花粉迅速增加，蕨类孢子含量升高，草本植物花粉含量锐减，孢粉沉积率降低，由于海平面回升，大陆架被淹没，此时孢粉主要来源于日本岛，九州地区生长了以栲属、栎属为主的常绿阔叶与落叶阔叶林，气候温暖湿润。 叶枝杉属花粉在整个岩芯中零星出现。叶枝杉属植物分布于菲律宾吕宋北部至塔斯马尼亚和新西兰气候潮湿的山地林中，该属花粉在岩芯中的出现，可能暗示了黑潮的影响或者是较强的夏季风。 草本植物与松属花粉百分比变化很好的反映了海平面的升降，松属花粉含量较高指示海平面较高。对岩芯中主要类型的花粉百分比进行了频谱分析，显示存在千年尺度的准周期变化，有明显的6.8，3.8，2.2，1.6 ka的周期。 孢粉样品中的炭屑统计表明，末次冰消期炭屑含量最高，可能因为末次冰消期降雨量增加，炭屑可被降水带到沉积地点沉积下来；全新世的炭屑浓度较高，尤其在晚全新世，出现了一个峰值，究其原因可能与气候变化和人类活动有关。

Migration patterns of young Pacific bluefin tuna (Thunnus orientalis) determined with archival tags

We investigated the migration and behavior of young Pacific bluefin tuna (Thunnus orientalis) using archival tags that measure environmental variables, record them in memory, and estimate daily geographical locations using measured light levels. Swimming depth, ambient water temperature, and feeding are described in a companion paper. Errors of the tag location estimates that could be checked were –0.54° ±0.75° (mean ±SD) in longitude and –0.12° ±3.06° in latitude. Latitude, estimated automatically by the tag, was problematic, but latitude, estimated by comparing recorded sea-surface temperatures with a map of sea-surface temperature, was satisfactory. We concluded that the archival tag is a reliable tool for estimating location on a scale of about one degree, which is sufficient for a bluefin tuna migration study. After release, tagged fish showed a normal swimming behavioral pattern within one day and normal feeding frequency within one month. In addition, fish with an archival tag maintained weight-at-length similar to that of wild fish; however, their growth rate was less than that of wild fish. Of 166 fish released in the East China Sea with implanted archival tags, 30 were recovered, including one that migrated across the Pacific Ocean. Migration of young Pacific bluefin tuna appears to consist of two phases: a residency phase comprising more than 80% of all days, and a traveling phase. An individual young Pacific bluefin tuna was observed to cover 7600 km in one traveling phase that lasted more than two months (part of this phase was a trans-Pacific migration completed within two months). Many features of behavior in the traveling phase were similar to those in the residency phase; however the temperature difference between viscera and ambient temperature was larger, feeding was slightly more frequent, and dives to deeper water were more frequent.

Swimming depth, ambient water temperature preference, and feeding frequency of young Pacific bluefin tuna (Thunnus orientalis) determined with archival tags

We investigated the migration and behavior of young Pacific Bluefin tuna (Thunnus orientalis) using archival tags. The archival tag measures environmental variables, records them in its memory, and estimates daily geographical locations based on measured light levels. Of 166 archival tags implanted in Pacific bluefin tuna that were released at the northeastern end of the East China Sea from 1995 to 1997, 30 tags were recovered, including one from a fish that migrated across the Pacific. This article describes swimming depth, ambient water temperature, and feeding frequency of young Pacific bluefin tuna based on retrieved data. Tag performance, effect of the tag on the fish, and horizontal movements of the species are described in another paper. Young Pacific bluefin tuna swim mainly in the mixed layer, usually near the sea surface, and swim in deeper water in daytime than at nighttime. They also exhibit a pattern of depth changes, corresponding to sunrise and sunset, apparently to avoid a specific low light level. The archival tags recorded temperature changes in viscera that appear to be caused by feeding, and those changes indicate that young Pacific bluefin tuna commonly feed at dawn and in the daytime, but rarely at dusk or at night. Water temperature restricts their distribution, as indicated by changes in their vertical distribution with the seasonal change in depth of the thermocline and by the fact that their horizontal distribution is in most cases confined to water in the temperature range of 14−20°C.

Developmental characters of Psettina Iijimae (Jordan and Starks), bothid flat fishes - Pisces

Post larval stages of Psettina Iijimae ranging from 1.8 mm NL to 44.6 mm SL collected during Naga Expedition and International Indian Ocean Expedition (IIOE) are described. The characteristics which help to identify larval stages of Psettina are: the presence of pigmented urohyal appendage in early stages which is progressively reduced during flexion stages and which disappears in later postflexion stages, the meristics, the spines on urohyal and posterior basipterygial processes and the absence of spines on cleithra. The P. iijimae can be distinguished by the presence of spines on the median fin rays which differentiate near the baseosts along the dorsal and ventral body wall much before the fin rays. The larvae of P.iijimae were more abundant in the Gulf of Thailand compared to South China Sea and Indian Ocean.

遥感研究南海台风引起的冷迹特征

海表面温度（Sea Surface Temperature, SST）是海洋生态环境变化的重要因子，也是海洋观测研究的最重要的因子之一。海表温度场表征了海洋热力、动力过程和海洋与大气相互作用的综合结果，是反映海气热量、动力和水汽交换的重要参量，也是气候变化及海洋营养盐浓度和初级生产力的重要影响因子。台风过后通常会在上层海洋引起冷迹，即台风路径附近的海表温度降低。海表温度的变化是台风与海洋之间能量交换的关键，对于台风的产生，演化和强度变化有非常重要的作用。因此，研究上层海洋对台风的响应，特别是海表温度对台风的响应过程有非常重要的科学意义。本研究主要利用微波SST逐日数据资料统计研究了海表面温度对南海台风的响应过程，并分析了中尺度涡（特别是气旋性涡）对台风所引起的降温幅度和降温位置的影响作用。在此研究基础上初步尝试提出了一种新的量化台风降温效应的方法。 首先，本研究以1998-2009年总共12年内经过中国南海的92个台风为研究对象，利用逐日连续的微波TMI及TMI-AMSER海表温度数据资料分析了92个台风所引起的最大降温幅度以及冷迹位置的分布特征。统计结果表明有64个（69.6%）台风引起了海表温度明显的降低（降温≥2oC），而对最大降温出现的位置进行分析发现：有超过半数（56个）的台风引起的最大降温位于台风路径的附近或路径右侧，同时还有8个（8.7%）台风引起的最大降温明显位于路径的左侧。文中选取了冷迹相对于台风路径出现在不同位置（左、右、附近）的4个台风为例来说明台风引起的降温特征。通过量化降温中心到台风路径的距离发现台风所引起的最大降温出现的位置主要集中分布在路径左右两侧100km范围内。另外，通过对比台风来之前的海平面高度距平发现先于台风之前处在于上层海洋环境的冷涡，特别是强冷涡，在台风引起的海表面降温幅度和位置分布中可能起着重要的作用，其中冷涡的位置与台风所引起的最大降温中心出现的位置有很好的相关性。 其次，本研究提出一个新的描述降温效应的指数。台风所经过的海域往往会出现海表温度的降低，而海表温度的变化对海洋生态系统有很重要的影响。台风的降温效应因台风、背景温度场和台风前的海洋环境条件而异。目前，海表温度对台风的响应效应主要是通过三个物理量来描述，降温幅度、冷迹范围、冷迹持续时间。但是还没有一个综合的量来对台风的降温效应进行定量的描述。本研究利用遥感微波SST数据尝试初步

南海北部区域表层水微生物多样性及其分布特点研究

海洋中的微生物多样性是十分丰富的。南海北部区域表层水的微生物群落结构及物种多样性情况仍不十分清楚。本研究，采用构建基因克隆文库的方法，对该区域内表层水中的微生物多样性及分布特点进行研究。获得了8000多个细菌16S rDNA基因、真核微生物ITS 区基因及光合微型生物 psbA 基因单克隆。本研究结果表明：在南海北部区域表层水中存在两种不同微生物类群，即近海岸带海洋微生物类群和开阔海域海洋微生物类群。 16S rDNA基因克隆文库中，确定了507个OTUs。93.7% 的16S rDNA 序列定义在同一种水平上，1.4 %的16S rDNA序列定义在同一属的水平上，2.7%的16S rDNA序列定义在同一纲的水平上，1.2%的16S rDNA序列定义在同一门的水平上。值得一提的是有0.7%的南海表层水样品的16S rDNA 序列，属于目前数据库中的未知序列。系统育树分析表明这类序列可归属于4个不同的分枝群。与Venter’s Sorcerer II 海洋科考（马尾岛海域）的结果不同，南海北部区域表层水中，并没有发现SAR11分支细菌、丝状杆菌（Fibrobacter）和Rheinheimera细菌序列，但南海北部区域却发现了马尾岛海域未检测到的物种，如酸杆菌门、恐球菌-栖热菌门、厚壁菌门，硝化螺旋菌门，浮霉菌门以及疣微菌类细菌。除疣微菌外，其他5种细菌都是海洋环境样品中较为常见的细菌。变形菌门、蓝细菌及厚壁菌门细菌序列是南海北部表层样品16S rDNA基因克隆文库中的主要类群。 真核生物如浮游植物和海洋真菌是海洋表面生物质的主要组成部分之一。现有的研究多集中在环境样品的原核微生物的群落结构研究上，很少关注海洋微型真核生物的多样性及群落结构分布。本研究通过构建ITS基因克隆文库的方法，得到了3044条ITS序列，最终定义了1288个OTUs。其中，329个OTUs序列定义在同一种水平上，310个OTUs序列定义在同一属或纲的水平上，123个OTUs序列定义在同一门的水平上。值得注意的是有339个OTUs的序列，属于目前数据库中的未知序列。系统发育树分析表明它们分别归属于4个不同的分枝群。这表明以往对海洋真核微型生物的多样性仍知之甚少。盘菌亚门、体腔动物门和担子菌纲是南海北部表层样品ITS基因克隆文库中的主要类群。此外，在南海北部区域还发现了少数归属于绿藻、链形植物、定鞭金藻类、放射虫类、Stramenopiles、Typhlocoela、壶菌类、多孢囊霉目、子囊菌门、地位未定的物种、 酵母、领鞭毛虫门、不可培养的后生动物和海绵动物的ITS序列。 海洋初级生产力主要是依靠光合微型浮游生物进行光合作用完成的。利用新设计的psbA通用引物，对南海北部33个表层水样滤膜进行基因克隆文库建库分析，最终获得了南海北部区域表层水微生物多样性及其分布特点研究3062条部分psbA基因序列，并将其划分为957个 OTUs。其中蓝细菌和未培养的病毒序列在psbA基因库中的数量最多。本研究还发现了南海北部区域存在11个独立分支的新型psbA类群。研究证实psbA基因可以作为一种研究海洋光合微型浮游生物群落结构的指示基因。 克隆文库相似性分析发现，在所有的16S rDNA克隆文库中没有任意两个站点的克隆文库相似性超过50%。虽然N401和N420站点的16S rDNA克隆文库相似性最大，但它们在地理位置上并不接近。一些地理位置接近的站点，其16S rDNA克隆文库之间相似性比较接近。比如，海南岛区域的克隆文库之间就比较相似，且在同一分支。大多数地理环境相似的站点的16S rDNA克隆文库都聚在同一大分支上。例如，来自于珠江口区域站点的克隆文库之间的相似性比较接近，而且分布在一个大分支中；开阔海洋区域的16S rDNA克隆文库，也大多聚类在同一分支中。但也有例外的情况：比如 N107 和N400 站点的16S rDNA克隆文库，就聚类到一起，分析发现这两个文库中所处的环境都是甲烷产生区，其中都含有相似的与甲烷代谢相关的菌群。不过从整体来看，整个南海北部的细菌群落，大致分为两大类：中国大陆近海岸微生物群落和开阔海域微生物群落。33个ITS克隆文库的相似性分析发现：相似性在10%以下的类群，可以分成两大分支，而且该分类，比细菌群落的分布情况更接近南海北部的地理环境特征。对psbA基因克隆文库的相似性分析也验证了在南海北部区域表层水中存在两种不同微生物生态系统。 此外，本研究针对分子生态专业软件DOTUR程序在处理大量克隆文库数据时所遇到的

Multiple cohorts of juvenile jack mackerel Trachurus japonicus in waters along the Tsushima Warm Current

The jack mackerel, Trachurus japonicus, has a prolonged spawning season and widely spread spawning grounds. The population in the coastal waters of Japan seems to be composed of several cohorts spawned seasonally from different waters. To understand its population structure along the Tsushima Warm Current, we analysed hatchdates and growth histories of fish from Kunda Bay, the southern, central and northern East China Sea (ECS), the southern Sea of Japan, and Maizuru Bay. Seven cohorts were detected from fish collected between June 2005 and June 2006 in Kunda Bay. Comparing hatchdate distributions and growth trajectories of the seven cohorts with those of the other five regional samples, we did not find that cohorts collected in Kunda Bay originated in the southern ECS. Therefore, these coastal waters of Japan appear to be significant spawning grounds for juvenile jack mackerel. (C) 2008 Elsevier B.V. All rights reserved.