Integer and fractional microwave induced resistance oscillations in a 2D system with moderate mobility

We report on integer and fractional microwave-induced resistance oscillations in a 2D electron system with high density and moderate mobility, and present results of measurements at high microwave intensity and temperature. Fractional microwave-induced resistance oscillations occur up to fractional denominator 8 and are quenched independently of their fractional order. We discuss our results and compare them with existing theoretical models. (C) 2009 Elsevier B.V. All rights reserved.

Equivalence between supersymmetric self-dual and Maxwell-Chern-Simons models coupled to a matter spinor superfield

We study the duality of the supersymmetric self-dual and Maxwell-Chern-Simons theories coupled to a fermionic matter superfield, using a master action. This approach evades the difficulties inherent to the quartic couplings that appear when matter is represented by a scalar superfield. The price is that the spinorial matter superfield represents a unusual supersymmetric multiplet, whose main physical properties we also discuss. (C) 2009 Elsevier B.V. All rights reserved.

On duality of the noncommutative supersymmetric Maxwell-Chern-Simons theory

We study the possibility of establishing the dual equivalence between the noncommutative supersymmetric Maxwell-Chern-Simons theory and the noncommutative supersymmetric self-dual theory. It turns to be that whereas in the commutative case the Maxwell-Chern-Simons theory can be mapped into the sum of the self-dual theory and the Chern-Simons theory, in the noncommutative case such a mapping is possible only for the theory with modified Maxwell term. (c) 2008 Elsevier B.V. All rights reserved.

Structural matching of 2D electrophoresis gels using deformed graphs

2D electrophoresis is a well-known method for protein separation which is extremely useful in the field of proteomics. Each spot in the image represents a protein accumulation and the goal is to perform a differential analysis between pairs of images to study changes in protein content. It is thus necessary to register two images by finding spot correspondences. Although it may seem a simple task, generally, the manual processing of this kind of images is very cumbersome, especially when strong variations between corresponding sets of spots are expected (e.g. strong non-linear deformations and outliers). In order to solve this problem, this paper proposes a new quadratic assignment formulation together with a correspondence estimation algorithm based on graph matching which takes into account the structural information between the detected spots. Each image is represented by a graph and the task is to find a maximum common subgraph. Successful experimental results using real data are presented, including an extensive comparative performance evaluation with ground-truth data. (C) 2010 Elsevier B.V. All rights reserved.

Automatic contour extraction from 2D neuron images

This work describes a novel methodology for automatic contour extraction from 2D images of 3D neurons (e.g. camera lucida images and other types of 2D microscopy). Most contour-based shape analysis methods cannot be used to characterize such cells because of overlaps between neuronal processes. The proposed framework is specifically aimed at the problem of contour following even in presence of multiple overlaps. First, the input image is preprocessed in order to obtain an 8-connected skeleton with one-pixel-wide branches, as well as a set of critical regions (i.e., bifurcations and crossings). Next, for each subtree, the tracking stage iteratively labels all valid pixel of branches, tip to a critical region, where it determines the suitable direction to proceed. Finally, the labeled skeleton segments are followed in order to yield the parametric contour of the neuronal shape under analysis. The reported system was successfully tested with respect to several images and the results from a set of three neuron images are presented here, each pertaining to a different class, i.e. alpha, delta and epsilon ganglion cells, containing a total of 34 crossings. The algorithms successfully got across all these overlaps. The method has also been found to exhibit robustness even for images with close parallel segments. The proposed method is robust and may be implemented in an efficient manner. The introduction of this approach should pave the way for more systematic application of contour-based shape analysis methods in neuronal morphology. (C) 2008 Elsevier B.V. All rights reserved.

Dinuclear Azide-Bridged Copper(II) Complex as Building Block for the Assembly of a 2D-Supramolecular Array

A novel Schiff base-copper(II) complex [Cu(2)L(2)(N(3))(2)](ClO(4))(2) 1, where L = (4-imidazolyl)ethylene-2-amino-1-ethylpyridine (apyhist), containing azide-bridges between adjacent copper ions in a dinuclear arrangement was isolated and characterized both in the solid state and in solution by X-ray crystallography and different spectroscopic techniques. Azide binding constants were estimated from titrations of the precursor [CuL(H(2)O)(2)](2+) solutions with sodium azide, giving rise to the azido-bridged species, [Cu(2)L(2)(N(3))(2)](2+). Raman spectra showed asymmetric stretching band at 2060 cm(-1), indicating the presence of azido ligands with a symmetric mu(1,) (1) binding geometry. EPA spectra, in frozen methanol/water solutions at 77 K, exhibited characteristic features of copper centers in tetragonal pyramidal coordination geometry, exhibiting magnetic interactions between them. Further, in solid state, two different values for magnetic coupling in this species were obtained, J/k = -(5.14 +/- 0.02) cm(-1) attributed to the mu(1, 1) azide-bridge mode, and J`z`/k = -(2.94 +/- 0.11) cm(-1) for the interaction between dinuclear moieties via water/perchorate bridges. Finally, an attempt was made to correlate structure and magnetic data for this dinuclear asymmetric end-on azido bridged-copper(II) 1 complex with those of another correlated dinuclear system, complex [Cu(2)L(2)Cl(2)](ClO(4))(2) 2, containing the same tridentate diimine ligand, but with chloro-bridged groups between the copper centres.

2D QSAR and similarity studies on cruzain inhibitors aimed at improving selectivity over cathepsin L

Hologram quantitative structure-activity relationships (HQSAR) were applied to a data set of 41 cruzain inhibitors. The best HQSAR model (Q(2) = 0.77; R-2 = 0.90) employing Surflex-Sim, as training and test sets generator, was obtained using atoms, bonds, and connections as fragment distinctions and 4-7 as fragment size. This model was then used to predict the potencies of 12 test set compounds, giving satisfactory predictive R-2 value of 0,88. The contribution maps obtained from the best HQSAR model are in agreement with the biological activities of the study compounds. The Trypanosoma cruzi cruzain shares high similarity with the mammalian homolog cathepsin L. The selectivity toward cruzam was checked by a database of 123 compounds, which corresponds to the 41 cruzain inhibitors used in the HQSAR model development plus 82 cathepsin L inhibitors. We screened these compounds by ROCS (Rapid Overlay of Chemical Structures), a Gaussian-shape volume overlap filter that can rapidly identify shapes that match the query molecule. Remarkably, ROCS was able to rank the first 37 hits as being only cruzain inhibitors. In addition, the area under the curve (AUC) obtained with ROCS was 0.96, indicating that the method was very efficient to distinguishing between cruzain and cathepsin L inhibitors. (c) 2007 Elsevier Ltd. All rights reserved.

Novel Application of 2D and 3D-Similarity Searches To Identify Substrates among Cytochrome P450 2C9, 2D6, and 3A4

Cytochrome P450 (CYP450) is a class of enzymes where the substrate identification is particularly important to know. It would help medicinal chemists to design drugs with lower side effects due to drug-drug interactions and to extensive genetic polymorphism. Herein, we discuss the application of the 2D and 3D-similarity searches in identifying reference Structures with higher capacity to retrieve Substrates of three important CYP enzymes (CYP2C9, CYP2D6, and CYP3A4). On the basis of the complementarities of multiple reference structures selected by different similarity search methods, we proposed the fusion of their individual Tanimoto scores into a consensus Tanimoto score (T(consensus)). Using this new score, true positive rates of 63% (CYP2C9) and 81% (CYP2D6) were achieved with false positive rates of 4% for the CYP2C9-CYP2D6 data Set. Extended similarity searches were carried out oil a validation data set, and the results showed that by using the T(consensus) score, not only the area of a ROC graph increased, but also more substrates were recovered at the beginning of a ranked list.

Testosteron och matematik;Fingerlängd (2D:4D) : en indikator för matematisk förmåga?

En individs prenatala testosteronhalter kan mätas genom att ta fram ett relationstal mellan längden på pek- och ringfinger: ett 2D:4D digit ratio index. Studier har visat att det finns ett samband mellan högre testosteronhalter och god matematisk förmåga. I föreliggande studie deltog 40 svenska gymnasieungdomar. Två hypoteser undersöktes: det finns ett samband mellan 2D:4D och matematikresultat samt det finns ett samband mellan kön, 2D:4D och matematikresultat. Datainsamlingen bestod av fingermätningar och provresultat i matematik. Korrelationsresultaten påvisade inget signifikant samband mellan fingerlängd och matematiska resultat. Studien påvisade heller inte någon interaktionseffekt mellan kön, fingerlängd och matematikresultat. Resultaten diskuteras ur ett sociokulturellt, biologiskt och miljömässigt perspektiv.

Extension And Testing Of A 2D Hydrodynamic Model For Direct Rainfall Runoff Simulation

While the simulation of flood risks originating from the overtopping of river banks is well covered within continuously evaluated programs to improve flood protection measures, flash flooding is not. Flash floods are triggered by short, local thunderstorm cells with high precipitation intensities. Small catchments have short response times and flow paths and convective thunder cells may result in potential flooding of endangered settlements. Assessing local flooding and pathways of flood requires a detailed hydraulic simulation of the surface runoff. Hydrological models usually do not incorporate surface runoff at this detailedness but rather empirical equations are applied for runoff detention. In return 2D hydrodynamic models usually do not allow distributed rainfall as input nor are any types of soil/surface interaction implemented as in hydrological models. Considering several cases of local flash flooding during the last years the issue emerged for practical reasons but as well as research topics to closing the model gap between distributed rainfall and distributed runoff formation. Therefore, a 2D hydrodynamic model, depth-averaged flow equations using the finite volume discretization, was extended to accept direct rainfall enabling to simulate the associated runoff formation. The model itself is used as numerical engine, rainfall is introduced via the modification of waterlevels at fixed time intervals. The paper not only deals with the general application of the software, but intends to test the numerical stability and reliability of simulation results. The performed tests are made using different artificial as well as measured rainfall series as input. Key parameters of the simulation such as losses, roughness or time intervals for water level manipulations are tested regarding their impact on the stability.

Solução da equação de transporte multidimensional em geometria cartesiana e meio infinito usando derivada fracionária

Neste trabalho, foi construída uma forma integral para a solução das equações de transporte em uma, duas e três dimensões, considerando o núcleo de espalhamento de Klein-Nishina, espalhamento isotrópico e o núcleo de espalhamento de Rutherford, respectivamente, seguindo a mesma idéia proposta em trabalhos recentes, nos quais foi construída uma solução para a equação de transporte de nêutrons em geometria cartesiana, usando derivada fracionária. A metodologia consiste em igualar a derivada fracionária do fluxo angular à equação integral, determinar a ordem da derivada fracionária comparando o núcleo da equação integral com o da definição de Riemann-Liouville. Essa formulação foi aplicada ao cálculo de dose absorvida. São apresentadas soluções geradas a partir do emprego do método da derivada fracionária e comparadas a resultados disponíveis na literatura.

Solução da equação de transporte de fótons para uma placa plana heterogênea, modelo de multigrupo com núcleo de espalhamento de Klein-Nishina

Neste trabalho o método LTSN é utilizado para resolver a equação de transporte de fótons para uma placa plana heterogênea, modelo de multigrupo, com núcleo de espalhamento de Klein-Nishina, obtendo-se o fluxo de fótons em valores discretos de energia. O fluxo de fótons, juntamente com os parâmetros da placa foram usados para o cálculo da taxa de dose absorvida e do fator de buildup. O método LTSN consiste na aplicação da transformada de Laplace num conjunto de equações de ordenadas discretas, fornece uma solução analítica do sistema de equações lineares algébricas e a construção dos fluxos angulares pela técnica de expansão de Heaviside. Essa formulação foi aplicada ao cálculo de dose absorvida e ao fator de Buildup, considerando cinco valores de energia. Resultados numéricos são apresentados.

Estudo e solução da equação de transporte de nêutrons bidimensionais pelo método LTSn para elevadas ordens de quadraturas angulares : LTSn2D - Diag e LTSn2D - DiagExp

O principal objetivo dessa tese consiste em determinar uma solução numéricada equação bidimensional do transporte de nêutrons para elevadas ordens de quadratura angular. Diagonalizando a matriz de transporte LTSN bidimensional , construímos dois algoritmos que se diferenciam pela forma de representar os termos de fuga transversal, que surgem nas equações LTSN integradas transversalmente. Esses termos no método LTSN2D − Diag são expressos como combinação linear dos autovetores multiplicados por exponenciais dos respectivos autovalores. No método LTSN2D − DiagExp os termos de fuga transversal são representados por uma função exponencial com constante de decaimento heuristicamente identificada com parâmetros materiais característicos do meio. A análise epectral desenvolvida permite realizar a diagonalização. Um estudo sobre o condicionamento é feito e também associamos um número de condicionamento ao termo de fuga transversal. Definimos os erros no fluxo aproximado e na fórmula da quadratura, e estabelecemos uma relação entre eles. A convergência ocorre com condições de fronteira e quadratura angular adequadas. Apresentamos os resultados numéricos gerados pelos novos métodos LTSN2D − Diag e LTSN2D − DiagExp para elevadas ordens de quadratura angular para um problema ilustrativo e comparamos com resultados disponíveis na literatura.

Modelo numérico para análise à flexão de elementos estruturais com protensão aderente e não aderente

Na protensão não aderente, a armadura permanece livre para se movimentar ao longo de seu perfil em todas as seções com exceção das de ancoragem. Não há aderência entre concreto e armadura, e a hipótese da compatibilidade de deformações entre o aço e concreto não é aplicável, tornando inviável o desenvolvimento de uma solução analítica. Visando colaborar para a maior compreensão do comportamento à flexão das estruturas com protensão não aderente e para o desenvolvimento de critérios nacionais de projeto, um modelo numérico foi implementado utilizando o elemento finito do tipo híbrido para pórticos planos. Nesta formulação, a equação para as solicitações ao longo do elemento é a função de interpolação, e as forças as variáveis interpoladas. Como esta função resulta das condições de equilíbrio, sem hipóteses arbitrárias, o método é considerado exato para forças e curvaturas. Elementos longos são possíveis, de maneira que um único elemento finito pode ser utilizado para um vão de viga ou pilar, reduzindo o esforço computacional. O caráter exato da formulação contribui para a boa modelagem dos cabos não aderentes, já que a tensão nestas armaduras depende das curvaturas de todas as seções do elemento. O modelo numérico proposto prevê a não linearidade geométrica, carregamentos cíclicos e a construção composta. Relações constitutivas já consolidadas na literatura são empregadas para os materiais. A cadeia de Maxwell é utilizada para representar o comportamento reológico do concreto e do aço de protensão, respeitando as características de envelhecimento de cada material. Inúmeros exemplos são apresentados, permitindo a comparação entre resultados numéricos e experimentais Uma análise paramétrica foi realizada, caracterizando o desempenho do modelo numérico frente a variações nos parâmetros de entrada. Discutem-se, ainda, dois critérios de ruptura para a utilização do modelo numérico no estudo do comportamento à flexão das estruturas com protensão não aderente. Os resultados indicam o bom desempenho do modelo numérico e a sua adequação para a realização de pesquisas sobre o assunto.

A equação de Poisson-Boltzmann em regiões com fronteira irregular

Propomos uma idealização da situação em que uma macromolécula é ionizada em um solvente. Neste modelo a área da superfície da molécula é suposta ser grande com respeito a seu diâmetro. A molécula é considerada como um dielétrico com uma distribuição de cargas em sua superfície. Utilizando as condições de transmissão, a distribuição de Boltzmann no solvente e resultados recentes sobre espaços de Sobolev no contexto de espaços métricos, bem como de integração sobre superfícies irregulares, o problema é formulado em forma variacional. Resultados clássicos do cálculo de variações permitem a resolução analítica do problema.