Low-cost disposable ALT electrochemical microsensors for in-vitro hepatotoxic assessment

Liver-on-chip systems are widely seen as having the potential to replace animal testing for long-term liver toxicity assessments. However, such systems necessitate solutions, such as electrochemical microsensors, to provide information about the cells exposed to chemical compounds in a confined space. This study describes the development of microsensors for the detection of alanine-aminotransferase (ALT), an intracellular enzyme found in hepatocytes, for monitoring the viability of in-vitro hepatic cell cultures. The electrochemical sensors were developed by using screen printed electrodes functionalized by drop-casting. These technologies are intended to produce disposable and low-cost sensors that can easily be exchanged once their performance is degraded. The sensors are capable of measuring ALT in a microfluidic environment through the detection of changes in glutamate concentration. The microsensors were found to be stable for more than 60 days and were successfully tested using hepatocellular lysates to assess their capability to quantify ALT activity in a hepatic cell culture. These results open the way to their integration in liver bioreactors to assess hepatocellular toxicity in-vitro.

Progress in silicon-based quantum computation

We review progress at the Australian Centre for Quantum Computer Technology towards the fabrication and demonstration of spin qubits and charge qubits based on phosphorus donor atoms embedded in intrinsic silicon. Fabrication is being pursued via two complementary pathways: a 'top-down' approach for near-term production of few-qubit demonstration devices and a 'bottom-up' approach for large-scale qubit arrays with sub-nanometre precision. The 'top-down' approach employs a low-energy (keV) ion beam to implant the phosphorus atoms. Single-atom control during implantation is achieved by monitoring on-chip detector electrodes, integrated within the device structure. In contrast, the 'bottom-up' approach uses scanning tunnelling microscope lithography and epitaxial silicon overgrowth to construct devices at an atomic scale. In both cases, surface electrodes control the qubit using voltage pulses, and dual single-electron transistors operating near the quantum limit provide fast read-out with spurious-signal rejection.

Protein contact prediction using patterns of correlation

We describe a new method for using neural networks to predict residue contact pairs in a protein. The main inputs to the neural network are a set of 25 measures of correlated mutation between all pairs of residues in two windows of size 5 centered on the residues of interest. While the individual pair-wise correlations are a relatively weak predictor of contact, by training the network on windows of correlation the accuracy of prediction is significantly improved. The neural network is trained on a set of 100 proteins and then tested on a disjoint set of 1033 proteins of known structure. An average predictive accuracy of 21.7% is obtained taking the best L/2 predictions for each protein, where L is the sequence length. Taking the best L/10 predictions gives an average accuracy of 30.7%. The predictor is also tested on a set of 59 proteins from the CASP5 experiment. The accuracy is found to be relatively consistent across different sequence lengths, but to vary widely according to the secondary structure. Predictive accuracy is also found to improve by using multiple sequence alignments containing many sequences to calculate the correlations. (C) 2004 Wiley-Liss, Inc.

Small regulatory RNAs in mammals

Mammalian cells harbor numerous small non-protein-coding RNAs, including small nucleolar RNAs (snoRNAs), microRNAs (miRNAs), short interfering RNAs (siRNAs) and small double-stranded RNAs, which regulate gene expression at many levels including chromatin architecture, RNA editing, RNA stability, translation, and quite possibly transcription and splicing. These RNAs are processed by multistep pathways from the introns and exons of longer primary transcripts, including protein-coding transcripts. Most show distinctive temporal- and tissue-specific expression patterns in different tissues, including embryonal stem cells and the brain, and some are imprinted. Small RNAs control a wide range of developmental and physiological pathways in animals, including hematopoietic differentiation, adipocyte differentiation and insulin secretion in mammals, and have been shown to be perturbed in cancer and other diseases. The extent of transcription of non-coding sequences and the abundance of small RNAs suggests the existence of an extensive regulatory network on the basis of RNA signaling which may underpin the development and much of the phenotypic variation in mammals and other complex organisms and which may have different genetic signatures from sequences encoding proteins.

Interface adaptor logic: A new model for interfacing peripherals in IP based designs

The introduction of standard on-chip buses has eased integration and boosted the production of IP functional cores. However, once an IP is bus specific retargeting to a different bus is time-consuming and tedious, and this reduces the reusability of the bus-specific IP. As new bus standards are introduced and different interconnection methods are proposed, this problem increases. Many solutions have been proposed, however these solutions either limit the IP block performance or are restricted to a particular platform. A new concept is presented that can connect IP blocks to a wide variety of interface architectures with low overhead. This is achieved through the use a special interface adaptor logic layer.

AS REDES SOCIAIS NA INTERNET, O COMPARTILHAMENTO DE INFORMAÇÕES E A ADERÊNCIA AO CONSUMO CONSCIENTE: UM ESTUDO EXPLORATÓRIO NA REGIÃO DO GRANDE ABC PAULISTA

Aliadas aos estudos sobre sustentabilidade, há inúmeras discussões e atitudes para combater consequências do uso irracional dos recursos naturais do planeta. Surge assim o entendimento do consumo, suas influências e alternativas. O indivíduo pode ter hábitos de consumo de forma consumista ou de forma consciente. O consumista é entendido como o oposto dos hábitos do consumidor consciente, sendo levado pelo impulso e pelo estímulo à compra, sem avaliar suas necessidades e impactos futuros. O consumo é de fato indispensável à humanidade. Entretanto, quando aplicado de forma exacerbada e incorreta, pode gerar sérias consequências sociais e/ou ambientais. O consumidor consciente tem a qualificação de avaliar dentre as possibilidades existentes, os impactos que podem ser ocasionados com a aquisição, de tal modo, a minimizar suas consequências e contribuir de alguma forma para uma sociedade mais sustentável. O principal objetivo desta pesquisa foi compreender a aderência dos pesquisados ao comportamento de consumo consciente, bem como avaliar o compartilhamento de informações sobre o tema por pessoas que estão inseridas em alguma rede social na internet, partindo do pressuposto que este é um dos principais meios de comunicação e compartilhamento de informações. Para a pesquisa, foi utilizada a metodologia de análise qualitativa de caráter exploratório e a técnica de entrevistas em profundidade baseada em roteiro semiestruturado. Por meio da análise do conteúdo, a compreensão dos resultados aponta que todos os entrevistados possuem um grau de conhecimento sobre o consumo consciente e a maioria tenta ter algum tipo de ação consciente. Mas, ao mesmo tempo, esses indivíduos podem sofrer influências neste processo principalmente de caráter pessoal, levando à alteração de ação. Com relação ao compartilhamento do tema nas redes sociais na internet, foi possível identificar que grande parte dos entrevistados já teve algum tipo de experiência da situação, mas ainda em pequena escala, com poucas ocorrências. Também acredita-se que o canal pode ser utilizado para a proliferação do tema, o que nos leva à conclusão de que é um canal viável ao compartilhamento. Porém, mediante a ruptura de hábitos, é utilizado para a ocorrência de um maior engajamento por parte dos usuários. A análise apresenta uma compreensão e perspectivas a partir do recorte estudado, abrindo horizonte para novos estudos e aprofundamento das reflexões apresentadas neste trabalho.

O IMPACTO DAS REDES SOCIAIS NA PROFISSÃO DOCENTE

Diante do grande avanço tecnológico e utilização de equipamentos e diversas ferramentas no ensino, além da conectividade a qualquer momento, é possível perceber o grande crescimento do uso das redes sociais tanto pelos alunos como pelos professores. Com este crescimento observa-se uma comunicação mais intensa entre aluno e professor fora do ambiente da sala de aula, principalmente por intermédio das redes sociais, com a comunicação eletrônica envolvendo e-mails, conversas online, trocas de arquivos, fotos, vídeos etc. Considerando essa nova realidade esta pesquisa objetivou investigar se existe um impacto dessa nova forma de comunicação na profissão docente. Nesse contexto, tendo como foco privilegiado o facebook, emergiram alguns questionamentos para análise: essa nova ferramenta auxilia na relação professor-aluno? Ela pode trazer algum impacto positivo e/ou negativo para o professor? Qual a influência do uso dessa rede social nas relações trabalhistas? Sua existência e o seu uso podem influenciar nas decisões da coordenação/direção da escola? O estudo partiu do pressuposto de que as redes sociais exercem impactos positivos e negativos, pois podem se constituir como ferramentas que auxiliam a prática pedagógica. No entanto, no que se refere às relações trabalhistas e também, às relações interpessoais, o professor pode estar vulnerável quanto às suas relações institucionais e profissionais. Fundamentada nas concepções de autores que discorrem sobre a utilização dessas redes, e sobre as características do trabalho frente às novas demandas do capital, a pesquisa de campo, do tipo exploratória, direcionou-se no sentido de identificar esses fatores por meio da análise dos dados investigados com professores que utilizam a rede social facebook. Os resultados confirmaram que há impactos de diversas naturezas no trabalho docente. Esta nova ferramenta, ao mesmo tempo em que pode auxiliar na relação professor-aluno, expõe o docente, e é utilizada, pelas instituições de ensino, como instrumento de controle e de exercício de poder que se refletem nas relações trabalhistas.

City branding:can goods and services branding models be used to brand cities?

A city's branding is investigated using generic product and services branding models. Two generic branding models and tourism segmentation models guide an investigation into city branding 'as it should be' and 'as it is' using Birmingham, England as a case study. The unique characteristics of city brands are identified and Keller's Brand Report Card provides a theoretical framework for building a picture of the brand-building activity taking place in the city. Four themes emerge and are discussed: 1) the impact of a network on brand models developed for organisations; 2) segmentation of brand elements; 3) corporate branding; and 4) the political dimension. A conclusion is that city branding would be more effective if the systems and structures of generic branding models were adopted.

Intracellular protein determination using droplet-based immunoassays

This paper describes the implementation of a sensitive, on-chip immunoassay for the analysis of intracellular proteins, developed using microdroplet technology. The system offers a number of analytical functionalities, enabling the lysis of low cell numbers, as well as protein detection and quantification, integrated within a single process flow. Cells were introduced into the device in suspension and were electrically lysed in situ. The cell lysate was subsequently encapsulated together with antibody-functionalized beads into stable, water-in-oil droplets, which were stored on-chip. The binding of intracellular proteins to the beads was monitored fluorescently. By analyzing many individual droplets and quantifying the data obtained against standard additions, we measured the level of two intracellular proteins, namely, HRas-mCitrine, expressed within HEK-293 cells, and actin-EGFP, expressed within MCF-7 cells. We determined the concentrations of these proteins over 5 orders of magnitude, from ~50 pM to 1 µM. The results from this semiautomated method were compared to those for determinations made using Western blots, and were found not only to be faster, but required a smaller number of cells. © 2011 American Chemical Society.

H264 data partitioned video streaming

Motivated by the increasing demand and challenges of video streaming in this thesis, we investigate methods by which the quality of the video can be improved. We utilise overlay networks that have been created by implemented relay nodes to produce path diversity, and show through analytical and simulation models for which environments path diversity can improve the packet loss probability. We take the simulation and analytical models further by implementing a real overlay network on top of Planetlab, and show that when the network conditions remain constant the video quality received by the client can be improved. In addition, we show that in the environments where path diversity improves the video quality forward error correction can be used to further enhance the quality. We then investigate the effect of IEEE 802.11e Wireless LAN standard with quality of service enabled on the video quality received by a wireless client. We find that assigning all the video to a single class outperforms a cross class assignment scheme proposed by other researchers. The issue of virtual contention at the access point is also examined. We increase the intelligence of our relay nodes and enable them to cache video, in order to maximise the usefulness of these caches. For this purpose, we introduce a measure, called the PSNR profit, and present an optimal caching method for achieving the maximum PSNR profit at the relay nodes where partitioned video contents are stored and provide an enhanced quality for the client. We also show that the optimised cache the degradation in the video quality received by the client becomes more graceful than the non-optimised system when the network experiences packet loss or is congested.

Adaptive congestion control of DSRC vehicle networks for collaborative road safety applications

Congestion control is critical for the provisioning of quality of services (QoS) over dedicated short range communications (DSRC) vehicle networks for road safety applications. In this paper we propose a congestion control method for DSRC vehicle networks at road intersection, with the aims of providing high availability and low latency channels for high priority emergency safety applications while maximizing channel utilization for low priority routine safety applications. In this method a offline simulation based approach is used to find out the best possible configurations of message rate and MAC layer backoff exponent (BE) for a given number of vehicles equipped with DSRC radios. The identified best configurations are then used online by an roadside access point (AP) for system operation. Simulation results demonstrated that this adaptive method significantly outperforms the fixed control method under varying number of vehicles. The impact of estimation error on the number of vehicles in the network on system level performance is also investigated.

Recent advances in spin crossover research

Thermal spin transition (spin crossover), one of the most fascinating dynamic electronic structure phenomena occurring in coordination compounds of third row transition metal ions, mostly of iron(II), iron(III) and cobalt(II) with critical ligand field strengths competing with the spin pairing energy, has attracted increasing attention by many research groups. One of the reasons is the promising potential for practical applications. In this chapter we intend to cover essential recent work, primarily accomplished within the European research network on “Thermal and Optical Switching of Molecular Spin States (TOSS)”. New spin crossover compounds and their thermal spin transition behaviour, also under applied pressure, novel effects observed by irradiation and magnetic field, will be discussed. Progress in theoretical treatments of spin crossover phenomena, particularly cooperativity, will be briefly outlined. The chapter concludes with a summary of research highlights published by the partner laboratories of the TMR network TOSS.

Bessel beams from semiconductor light sources

We report on recent progress in the generation of non-diffracting (Bessel) beams from semiconductor light sources including both edge-emitting and surface-emitting semiconductor lasers as well as light-emitting diodes (LEDs). Bessel beams at the power level of Watts with central lobe diameters of a few to tens of micrometers were achieved from compact and highly efficient lasers. The practicality of reducing the central lobe size of the Bessel beam generated with high-power broad-stripe semiconductor lasers and LEDs to a level unachievable by means of traditional focusing has been demonstrated. We also discuss an approach to exceed the limit of power density for the focusing of radiation with high beam propagation parameter M2. Finally, we consider the potential of the semiconductor lasers for applications in optical trapping/tweezing and the perspectives to replace their gas and solid-state laser counterparts for a range of implementations in optical manipulation towards lab-on-chip configurations. © 2014 Elsevier Ltd.