A radiation hybrid map of river buffalo (Bubalus bubalis) chromosome 7 and comparative mapping to the cattle and human genomes

A preliminary radiation hybrid (RH) map containing 50 loci on chromosome 7 of the domestic river buffalo Bubalus bubalis (BBU; 2n = 50) was constructed based on a comparative mapping approach. The RH map of BBU7 includes thirty-seven gene markers and thirteen microsatellites. All loci have been previously assigned to Bos taurus (BTA) chromosome BTA6, which is known for its association with several economically important milk production traits in cattle. The map consists of two linkage groups spanning a total length of 627.9 cR(5,000). Comparative analysis of the BBU7 RH 5,000 map with BTA6 in cattle gave new evidence for strong similarity between the two chromosomes over their entire length and exposed minor differences in locus order. Comparison of the BBU7 RH 5,000 map with the Homo sapiens (HSA) genome revealed similarity with a large chromosome segment of HSA4. Comparative analysis of loci in both species revealed more variability than previously known in gene order and several chromosome rearrangements including centromere relocation. The data obtained in our study define the evolutionarily conserved segment on BBU7 and HSA4 to be between 3.5 megabases (Mb) and 115.8 Mb in the HSA4 (genome build 36) DNA sequence. Copyright (c) 2008 S. Karger AG, Basel.

A radiation hybrid map of river buffalo (Bubalus bubalis) chromosome 1 (BBU1)

The largest chromosome in the river buffalo karyotype, BBU1, is a submetacentric chromosome with reported homology between BBU1q and bovine chromosome 1 and between BBU1p and BTA27. We present the first radiation hybrid map of this chromosome containing 69 cattle derived markers including 48 coding genes, 17 microsatellites and four ESTs distributed in two linkage groups spanning a total length of 1330.1 cR(5000). The RH map was constructed based on analysis of a recently developed river buffalo-hamster whole genome radiation hybrid (BBURH5000) panel. The retention frequency of individual markers across the panel ranged from 17.8 to 52.2%. With few exceptions, the order of markers within linkage groups is identical to the order established for corresponding cattle RH maps. The BBU1 map provides a starting point for comparison of gene order rearrangements between river buffalo chromosome 1 and its bovine homologs. Copyright (C) 2007 S. Karger AG, Basel.

A first generation whole genome RH map of the river buffalo with comparison to domestic cattle

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

Preliminary functional characterization, cloning and primary sequence of Fastuosain, a cysteine peptidase isolated from fruits of Bromelia fastuosa

The present work reports the characterization of Fastuosain, a novel cysteine protease of 25kDa, purified from the unripe fruits of Bromelia fastuosa, a wild South American Bromeliaceae. Proteolytic activity, measured using casein and synthetic substrates, was dependent on the presence of thiol reagents, having maximum activity at pH 7.0. The present work reports cDNA cloning of Fastuosain; cDNA was amplified by PCR using specific primers. The product was 1096pb long. Mature fastuosain has 217 residues, and with the proregion has a total length of 324 residues. Its primary sequence showed high homology with ananain(74%), stem bromelain (66%) and papain (44%).

Biologia reprodutiva de Apidoras fuscoguttatus (Siluriformes, Callichthyidae) em riacho de cabeceira da bacia do alto Rio Paraná

Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)

Juveniles of the piscivorous dourado Salminus brasiliensis mimic the piraputanga Brycon hilarii as an alternative predation tactic

Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)

Assessment of external root temperature during root canal irradiation by Nd:YAG and Er:YAG lasers

Different types of laser have been widely studied for applicability in the oral health area. In the endodontic area, investigations with some types of laser have been conducted to establish safe parameters for clinical application in root canals. However, it has not been duly explained whether the temperature increase caused by laser irradiation could cause alteration in the temperature on the external surface of the root and, consequently, alterations in the cells of the periodontal ligament, causing resorption and even loss of the dental element. The proposal in this paper was to gauge the external root temperature in the apical and cervical regions of the roots of human teeth during root canal irradiation with Nd:yttrium aluminum garnet (YAG) and Er:YAG lasers using different parameters. The novel approach of this paper is the use of the technique of laser applications along the total length of the root canal with series of repetitive irradiation, however, using time of 1 s of irradiation associated with 1 s off to avoid cumulative thermal effects. Experimental results confirm the accuracy of the parameters and exposure regimen obtained. All the parameters used in this paper are acceptable from a clinical as well as a biological point of view. (C) 2009 Laser Institute of America.

Stochastic Skellam model

Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)

Age, growth and yield per recruit analysis of the pintado Pseudoplatystoma corruscans (Agassiz, 1829) in the Cuiabá River basin, Pantanal Matogrossense, Brazil

A idade e o crescimento do pintado Pseudoplatystoma corruscans foram estudados durante o período de maio de 1994 a maio de 1995. O comprimento-padrão variou de 52 a 145 cm e o peso total, de 1,3 a 41 kg. As relações biométricas entre comprimento-padrão (Ls) e comprimento total (Ltotal) e entre peso total (Wt) e comprimento-padrão (Ls) foram obtidas, sendo, respectivamente: Ltotal = 3,296 + 1,069 * Ls e Wt = 0,00624 * Ls3,134. O fator de condição, calculado mensalmente, sugere que a desova ocorreu entre os meses de fevereiro e março. A idade foi estimada pela contagem de anéis de crescimento presentes nos raios modificados (esporão) das nadadeiras peitorais, detectando 10 classes etárias. A distância média do último anel até a borda do esporão sugere que o período de menor crescimento ocorreu entre julho e setembro (seca). A equação de von Bertalaffy que descreve o crescimento do pintado é: Lt = 183 * [1 - exp - 0,085 * (t + 3,274)]. A mortalidade total obtida foi Z = 0,24 ano-1 e a mortalidade natural M = 0,20 ano-1. Com o presente nível de explotação, F = Z - M = 0,04 ano-1, conclui-se que o estoque do pintado ainda não estava sobrexplotado na bacia do rio Cuiabá, Pantanal Matogrossense, na época em que foi realizado o estudo.

Hook selectivity of the pacu Piaractus mesopotamicus (Holmberg, 1887) in the Pantanal, the state of Mato Grosso do Sul, Brazil

Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)

Yield per recruit of the pacu Piaractus mesopotamicus (Holmberg, 1887) in the pantanal of Mato Grosso do Sul, Brazil

Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)

The importance of excretion by Chironomus larvae on the internal loads of nitrogen and phosphorus in a small eutrophic urban reservoir

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

Ecology of the parasitic endohelminth community of Piaractus mesopotamicus (Holmberg, 1887) (Characiformes) from Aquidauana and Miranda Rivers, Pantanal, state of Mato Grosso do Sul, Brazil

Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)

Ecology of the parasitic endohelminth community of Pseudoplatystoma fasciatum (Linnaeus, 1776) (Siluriformes: Pimelodidae) from the Aquidauana River, Pantanal, State of Mato Grosso do Sul, Brazil

Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)

Caracterização das assembléias de peixes de riachos de cabeceira no período chuvoso na bacia do rio Cachoeira (SE da Bahia, NE do Brasil)

Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)