907 resultados para Hierarchy and topology
                                
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We outline a comprehensive study of spin-0 glueball properties which, in particular, keeps track of the topological gluon structure. Specifically, we implement (semi-hard) topological instanton physics as well as topological charge screening in the QCD vacuum into the operator product expansion (OPE) of the glueball correlators. A realistic instanton size distribution and the (gauge-invariant) renormalization of the instanton contributions are also implemented. Predictions for 0(++) and 0(-+) glueball properties are presented.
                                
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In this paper, we present relations between Camassa-Holm (CH), Harry-Dym (HD) and modified Korteweg-de Vries (mKdV) hierarchies, which are given by the hodograph type transformation. (C) 2001 IMACS. Published by Elsevier B.V. B.V. All rights reserved.
                                
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The dressing and vertex operator formalism is emploied to study the soliton solutions of the N = I super mKdV and sinh-Gordon models. Explicit two and four vertex solutions are constructed. The relation between the soliton solutions of both models is verified. (c) 2006 Elsevier B.V. All rights reserved.
                                
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Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)
                                
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Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)
                                
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By using the reductive perturbation method of Taniuti with the introduction of an infinite sequence of slow time variables tau(1), tau(3), tau(5), ..., we study the propagation of long surface-waves in a shallow inviscid fluid. The Korteweg-de Vries (KdV) equation appears as the lowest order amplitude equation in slow variables. In this context, we show that, if the lowest order wave amplitude zeta(0) satisfies the KdV equation in the time tau(3), it must satisfy the (2n+1)th order equation of the KdV hierarchy in the time tau(2n+1), With n = 2, 3, 4,.... AS a consequence of this fact, we show with an explicit example that the secularities of the evolution equations for the higher-order terms (zeta(1), zeta(2),...) of the amplitude can be eliminated when zeta(0) is a solitonic solution to the KdV equation. By reversing this argument, we can say that the requirement of a secular-free perturbation theory implies that the amplitude zeta(0) satisfies the (2n+1)th order equation of the KdV hierarchy in the time tau(2n+1) This essentially means that the equations of the KdV hierarchy do play a role in perturbation theory. Thereafter, by considering a solitary-wave solution, we show, again with an explicit, example that the elimination of secularities through the use of the higher order KdV hierarchy equations corresponds, in the laboratory coordinates, to a renormalization of the solitary-wave velocity. Then, we conclude that this procedure of eliminating secularities is closely related to the renormalization technique developed by Kodama and Taniuti.
                                
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Dominant species are those which delimit and defend territories from other individuals of the same or different species. Subordinate species are those which, furtive and sneakily, use sources of nectar from other individuals. This study aimed to describe the aggressive interactions between species of hummingbirds, define which species are dominant and which are subordinate, investigate if the sharing of resources occurs during the visits, and compare the behaviour of the dominant species in different strata (tree, arbustive and herbaceous). The species observed interacting with Anthracothorax nigricollis Vieillot 1817 were Phaethornis pretrei Lesson and Delattrer 1839, Thalurania furcata Gmelin 1788, and Polytmus guainumbi Pallas 1764. Nine behavioural acts grouped into four categories were identified and described. The dominant species is A. nigricollis (with 0.9 of the attacks), followed by T. furcata (with 0.07) and P. pretrei (with 0.03). The resource sharing was seen only in the shrub layer, in C. surinamensis, in which there was intraspecific and interspecific sharing. A. nigricollis showed higher interspecific toleration, T. furcata (0.27) and P. pretrei (0.55) than intraspecific A. nigricollis (0.18). The frequency of occurrence of behaviours expressed by A. nigricollis in the three vegetation strata differed significantly.
                                
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The results on the nutritional influence in the social hierarchy establishment among females from six colonies of Mischocyttarus cassununga show that: - there was no caste determination in the pre-imaginal period concerning ingested food quantities, however, in relation to qualification (proteins and carbohydrate) the Mann-Whitney test applied showed variation among colonies: in two colonics (colony 3, p=0.0209; colony 4, p=0.0090) the larvae which ingested a higher quantity of solid food became adults of hierarchically higher position, however in two other colonies, colony 1 (p=0.6744) and colony 2 (p=0.3367) this difference was not statistically significant; in two experimentally manipulated colonies the caste determination was observed in the imaginal phase (it was verified that the larger the food quantity consumed, the higher the assumed hierarchical position by the individuals); - adult individuals of hierarchically higher position in two colonies ingested a greater amount of solid than liquid food (Mann-Whitney; p ≤ 0.05), however in the other three colonies there was no difference. It can be seen that for all colonies (2, 3, 4, 5 and 6) the high tendency to solid food ingestion occurs. In colony 1, this data was not collected because the observation purpose was different); - inside the colony hierarchy, the older individuals were the ones that occupied higher hierarchical positions; - more than one inseminated female per colony was found in the two experimentally manipulated colonies ; - ovarian development is greater in inseminated females; - the average height of the 3rd tergite was greater for inseminated females, indicating an adaptation to accommodate larger ovary development (t-Student test; p ≤ 0.05).
Prediction of Oncogenic Interactions and Cancer-Related Signaling Networks Based on Network Topology
                                
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Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)
                                
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Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)
                                
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Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)
                                
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An analytical model for Virtual Topology Reconfiguration (VTR) in optical networks is developed. It aims at the optical networks with a circuit-based data plane and an IPlike control plane. By identifying and analyzing the important factors impacting the network performance due to VTR operations on both planes, we can compare the benefits and penalties of different VTR algorithms and policies. The best VTR scenario can be adaptively chosen from a set of such algorithms and policies according to the real-time network situations. For this purpose, a cost model integrating all these factors is created to provide a comparison criterion independent of any specific VTR algorithm and policy. A case study based on simulation experiments is conducted to illustrate the application of our models.
                                
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In protein databases there is a substantial number of proteins structurally determined but without function annotation. Understanding the relationship between function and structure can be useful to predict function on a large scale. We have analyzed the similarities in global physicochemical parameters for a set of enzymes which were classified according to the four Enzyme Commission (EC) hierarchical levels. Using relevance theory we introduced a distance between proteins in the space of physicochemical characteristics. This was done by minimizing a cost function of the metric tensor built to reflect the EC classification system. Using an unsupervised clustering method on a set of 1025 enzymes, we obtained no relevant clustering formation compatible with EC classification. The distance distributions between enzymes from the same EC group and from different EC groups were compared by histograms. Such analysis was also performed using sequence alignment similarity as a distance. Our results suggest that global structure parameters are not sufficient to segregate enzymes according to EC hierarchy. This indicates that features essential for function are rather local than global. Consequently, methods for predicting function based on global attributes should not obtain high accuracy in main EC classes prediction without relying on similarities between enzymes from training and validation datasets. Furthermore, these results are consistent with a substantial number of studies suggesting that function evolves fundamentally by recruitment, i.e., a same protein motif or fold can be used to perform different enzymatic functions and a few specific amino acids (AAs) are actually responsible for enzyme activity. These essential amino acids should belong to active sites and an effective method for predicting function should be able to recognize them. (C) 2012 Elsevier Ltd. All rights reserved.
                                
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Various factors are believed to govern the selection of references in citation networks, but a precise, quantitative determination of their importance has remained elusive. In this paper, we show that three factors can account for the referencing pattern of citation networks for two topics, namely "graphenes" and "complex networks", thus allowing one to reproduce the topological features of the networks built with papers being the nodes and the edges established by citations. The most relevant factor was content similarity, while the other two - in-degree (i.e. citation counts) and age of publication - had varying importance depending on the topic studied. This dependence indicates that additional factors could play a role. Indeed, by intuition one should expect the reputation (or visibility) of authors and/or institutions to affect the referencing pattern, and this is only indirectly considered via the in-degree that should correlate with such reputation. Because information on reputation is not readily available, we simulated its effect on artificial citation networks considering two communities with distinct fitness (visibility) parameters. One community was assumed to have twice the fitness value of the other, which amounts to a double probability for a paper being cited. While the h-index for authors in the community with larger fitness evolved with time with slightly higher values than for the control network (no fitness considered), a drastic effect was noted for the community with smaller fitness. (C) 2012 Elsevier Ltd. All rights reserved.
                                
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The equilibrium magnetic field inside axisymmetric plasmas with inversions on the toroidal current density is studied. Structurally stable non-nested magnetic surfaces are considered. For any inversion in the internal current density the magnetic families define several positive current channels about a central negative one. A general expression relating the positive and negative currents is derived in terms of a topological anisotropy parameter. Next, an analytical local solution for the poloidal magnetic flux is derived and shown compatible with current hollow magnetic pitch measurements shown in the literature. Finally, the analytical solution exhibits non-nested magnetic families with positive anisotropy, indicating that the current inside the positive channels have at least twice the magnitude of the central one.
 
                    